| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78066124
Identifier: 78066124
GI number: 78066124
Start: 1643161
End: 1643622
Strand: Reverse
Name: 78066124
Synonym: Bcep18194_A4654
Alternate gene names: NA
Gene position: 1643622-1643161 (Counterclockwise)
Preceding gene: 78066125
Following gene: 78066117
Centisome position: 44.49
GC content: 61.69
Gene sequence:
>462_bases ATGATTCAACTGACCCGCCCGTTTCGTGCAATCGCCATCGCCGGCGTACTGCTCGCTTGCGCTGCCCCCACGTTTGCACA AGCAGACAACCCCATCGGCATGTGGCAGACGATCGACGACAACACGCATCAGCCGAAGGCACTCGTGCAGATCGCCGAGG ACGGTGACGGTGCGCTGACCGGCAAGGTCGTCAAGGGCCTCGGCGCGAACGATACGCCCGATCGCCGCTGCACCGCTTGC ACGGACGAGCGCAAGGATCAGCTCATCAAGGGCATGACGATCATCAAGGCCATGAAGAAGGAAGGCGACCACTGGGACGG CGGCAACATTCTCGACCCGGAGAACGGCAAGGTCTACAAGTGCAAGATGACGCTTGAAGACGGCGGCCAGAAGCTCGTCG TGCGCGGTTACATCGGCGTGTCGCTGCTCGGTCGTTCGCAGACCTGGGTTCGCCAGCAATAA
Upstream 100 bases:
>100_bases CGTTGTTTCACGTATTCTGACGAAGCTCGCAACATGCCCGCCCCATGCAGACGGTCGTGCGGGCAAATCGAACACGACAT GCAAAACAAGGAGGACGACA
Downstream 100 bases:
>100_bases TGCGGCTCGCGCTTAAACGCGCGGCTCAATGAAAAAATCGGCCTGCGACGAAGTCGTCAGGCCGATTTTCTTTTGGTGCG TGCGTAGCGGGAACTGAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MIQLTRPFRAIAIAGVLLACAAPTFAQADNPIGMWQTIDDNTHQPKALVQIAEDGDGALTGKVVKGLGANDTPDRRCTAC TDERKDQLIKGMTIIKAMKKEGDHWDGGNILDPENGKVYKCKMTLEDGGQKLVVRGYIGVSLLGRSQTWVRQQ
Sequences:
>Translated_153_residues MIQLTRPFRAIAIAGVLLACAAPTFAQADNPIGMWQTIDDNTHQPKALVQIAEDGDGALTGKVVKGLGANDTPDRRCTAC TDERKDQLIKGMTIIKAMKKEGDHWDGGNILDPENGKVYKCKMTLEDGGQKLVVRGYIGVSLLGRSQTWVRQQ >Mature_153_residues MIQLTRPFRAIAIAGVLLACAAPTFAQADNPIGMWQTIDDNTHQPKALVQIAEDGDGALTGKVVKGLGANDTPDRRCTAC TDERKDQLIKGMTIIKAMKKEGDHWDGGNILDPENGKVYKCKMTLEDGGQKLVVRGYIGVSLLGRSQTWVRQQ
Specific function: Unknown
COG id: COG4731
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16650; Mature: 16650
Theoretical pI: Translated: 8.33; Mature: 8.33
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQLTRPFRAIAIAGVLLACAAPTFAQADNPIGMWQTIDDNTHQPKALVQIAEDGDGALT CCCCCCHHHHHHHHHHHHHHCCCCHHCCCCCCCCEEECCCCCCCCCEEEEEECCCCCEEE GKVVKGLGANDTPDRRCTACTDERKDQLIKGMTIIKAMKKEGDHWDGGNILDPENGKVYK HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE CKMTLEDGGQKLVVRGYIGVSLLGRSQTWVRQQ EEEEECCCCCEEEEEEEECEEEECCCCCCCCCC >Mature Secondary Structure MIQLTRPFRAIAIAGVLLACAAPTFAQADNPIGMWQTIDDNTHQPKALVQIAEDGDGALT CCCCCCHHHHHHHHHHHHHHCCCCHHCCCCCCCCEEECCCCCCCCCEEEEEECCCCCEEE GKVVKGLGANDTPDRRCTACTDERKDQLIKGMTIIKAMKKEGDHWDGGNILDPENGKVYK HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE CKMTLEDGGQKLVVRGYIGVSLLGRSQTWVRQQ EEEEECCCCCEEEEEEEECEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA