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The map label for this gene is scpB [H]

Identifier: 78066107

GI number: 78066107

Start: 1618313

End: 1619344

Strand: Direct

Name: scpB [H]

Synonym: Bcep18194_A4637

Alternate gene names: 78066107

Gene position: 1618313-1619344 (Clockwise)

Preceding gene: 78066106

Following gene: 78066108

Centisome position: 43.81

GC content: 65.21

Gene sequence:

>1032_bases
ATGAATACCCAAGAGGCGAAGATCGTCCTCGAGACTGCTTTGATCTGTGCGCAGGAACCGCTGAAACTCGGCGATTTGCG
CAAGCTCTTTGCCGACGGCGTGTCGGCTGACACGGTCCGCACGTTGCTCGAAGATCTGAAACAGGATTGGTCCGGCCGCG
GCGTCGAACTGGTGGCGCTGGCAACCGGATGGCGCTTCCAGAGCAAGCCGGCGATGCGTCACTATCTGGATCGCCTGCAT
CCCGAGAAGCCGCCGAAATATTCGCGTGCGGTGCTCGAAACGCTCGCGATCATTGCGTACCGGCAACCTGTCACGCGCGG
CGACATCGAAGAGATTCGCGGCGTGACGGTCAATACGCAGGTGGTCAAGCAACTCGAGGATCGCGGCTGGATCGAAGTGA
TCGGTCATCGCGACGTGCCGGGACGCCCGGCGCTGTATGCGACGACCAAGCAGTTCCTCGACGACCTCGGCCTGAAGGCG
CTCGATGATCTGCCTGCGCTCGAAGAGCCGGCCGCGAACATCGAGGCCGCGCTGCTTGCGCAGCAGGCGATGGATTTCGA
CGAGGGCATGCCGGTTGCCGACGACGCAACGGGCGACGCGCCGCAAACGGATGAGGCATCCGCCGGTCAATCGGCGGGAT
TGCCGGATGATCCCGCGGCGGACGTCGCGTCGACGCATGAAATCGCGAGCCGCGATACGCTCGATGCTGTTCGCGGGCAA
ACGGAACAAATGGAACAGGCTGGCGCCGAAGCAGTGCCAGCCGGTGTGCAGCCCGAGCCGCTGCGCGCGGATTGGAGCGA
GGAAGATCGCAAGCCGGCTGCCGAAGCGGTTGCCGGAGACGGAGCGGAAGCGGCCGGCGACATGCCCGGCGAGGCTGGCC
AGGCCGACGCCCCCCGTTCCCGTCCTGCGGACGACGAGATGCTGGACGACACGTCCGACAGTCTCGCCGATGCCGTACGA
AGCGCCAGTGCACCCATCGGTGCCGATGCGCTGCCGGACGACGAAGCAGAACCTGAACAGCGTCGCGCCTGA

Upstream 100 bases:

>100_bases
CCCATCAATATGACCGATCAGAATCGGGCGAGCGCGTCTTCCGTTCCTTTCGTCTGTTTGTTGATCCGGTTCGTTTGACC
ACAGGGTCTGGCCTAGCTGC

Downstream 100 bases:

>100_bases
TCGCGGCCAACTTCTTGCCGCGCCCGCGCCGGGCGCGAGACCTGACATTTTGAGGTTGTTTTGACAGATATCCACGATAT
TGAATCGTCCGCGCCTGCCG

Product: condensin subunit ScpB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MNTQEAKIVLETALICAQEPLKLGDLRKLFADGVSADTVRTLLEDLKQDWSGRGVELVALATGWRFQSKPAMRHYLDRLH
PEKPPKYSRAVLETLAIIAYRQPVTRGDIEEIRGVTVNTQVVKQLEDRGWIEVIGHRDVPGRPALYATTKQFLDDLGLKA
LDDLPALEEPAANIEAALLAQQAMDFDEGMPVADDATGDAPQTDEASAGQSAGLPDDPAADVASTHEIASRDTLDAVRGQ
TEQMEQAGAEAVPAGVQPEPLRADWSEEDRKPAAEAVAGDGAEAAGDMPGEAGQADAPRSRPADDEMLDDTSDSLADAVR
SASAPIGADALPDDEAEPEQRRA

Sequences:

>Translated_343_residues
MNTQEAKIVLETALICAQEPLKLGDLRKLFADGVSADTVRTLLEDLKQDWSGRGVELVALATGWRFQSKPAMRHYLDRLH
PEKPPKYSRAVLETLAIIAYRQPVTRGDIEEIRGVTVNTQVVKQLEDRGWIEVIGHRDVPGRPALYATTKQFLDDLGLKA
LDDLPALEEPAANIEAALLAQQAMDFDEGMPVADDATGDAPQTDEASAGQSAGLPDDPAADVASTHEIASRDTLDAVRGQ
TEQMEQAGAEAVPAGVQPEPLRADWSEEDRKPAAEAVAGDGAEAAGDMPGEAGQADAPRSRPADDEMLDDTSDSLADAVR
SASAPIGADALPDDEAEPEQRRA
>Mature_343_residues
MNTQEAKIVLETALICAQEPLKLGDLRKLFADGVSADTVRTLLEDLKQDWSGRGVELVALATGWRFQSKPAMRHYLDRLH
PEKPPKYSRAVLETLAIIAYRQPVTRGDIEEIRGVTVNTQVVKQLEDRGWIEVIGHRDVPGRPALYATTKQFLDDLGLKA
LDDLPALEEPAANIEAALLAQQAMDFDEGMPVADDATGDAPQTDEASAGQSAGLPDDPAADVASTHEIASRDTLDAVRGQ
TEQMEQAGAEAVPAGVQPEPLRADWSEEDRKPAAEAVAGDGAEAAGDMPGEAGQADAPRSRPADDEMLDDTSDSLADAVR
SASAPIGADALPDDEAEPEQRRA

Specific function: May participate in chromosomal partitioning during cell division (Potential) [H]

COG id: COG1386

COG function: function code K; Predicted transcriptional regulator containing the HTH domain

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005234
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04079 DUF387 [H]

EC number: NA

Molecular weight: Translated: 36670; Mature: 36670

Theoretical pI: Translated: 4.07; Mature: 4.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTQEAKIVLETALICAQEPLKLGDLRKLFADGVSADTVRTLLEDLKQDWSGRGVELVAL
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEE
ATGWRFQSKPAMRHYLDRLHPEKPPKYSRAVLETLAIIAYRQPVTRGDIEEIRGVTVNTQ
ECCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHH
VVKQLEDRGWIEVIGHRDVPGRPALYATTKQFLDDLGLKALDDLPALEEPAANIEAALLA
HHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHCHHHHHCCCCCCCCHHHHHHHHHH
QQAMDFDEGMPVADDATGDAPQTDEASAGQSAGLPDDPAADVASTHEIASRDTLDAVRGQ
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCH
TEQMEQAGAEAVPAGVQPEPLRADWSEEDRKPAAEAVAGDGAEAAGDMPGEAGQADAPRS
HHHHHHCCCHHCCCCCCCCCCCCCCCHHHCCHHHHHHHCCCCHHCCCCCCCCCCCCCCCC
RPADDEMLDDTSDSLADAVRSASAPIGADALPDDEAEPEQRRA
CCCCHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCC
>Mature Secondary Structure
MNTQEAKIVLETALICAQEPLKLGDLRKLFADGVSADTVRTLLEDLKQDWSGRGVELVAL
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEE
ATGWRFQSKPAMRHYLDRLHPEKPPKYSRAVLETLAIIAYRQPVTRGDIEEIRGVTVNTQ
ECCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHH
VVKQLEDRGWIEVIGHRDVPGRPALYATTKQFLDDLGLKALDDLPALEEPAANIEAALLA
HHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHCHHHHHCCCCCCCCHHHHHHHHHH
QQAMDFDEGMPVADDATGDAPQTDEASAGQSAGLPDDPAADVASTHEIASRDTLDAVRGQ
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCH
TEQMEQAGAEAVPAGVQPEPLRADWSEEDRKPAAEAVAGDGAEAAGDMPGEAGQADAPRS
HHHHHHCCCHHCCCCCCCCCCCCCCCHHHCCHHHHHHHCCCCHHCCCCCCCCCCCCCCCC
RPADDEMLDDTSDSLADAVRSASAPIGADALPDDEAEPEQRRA
CCCCHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12704232 [H]