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The map label for this gene is fimZ [C]

Identifier: 78065985

GI number: 78065985

Start: 1479080

End: 1479871

Strand: Reverse

Name: fimZ [C]

Synonym: Bcep18194_A4514

Alternate gene names: 78065985

Gene position: 1479871-1479080 (Counterclockwise)

Preceding gene: 78065988

Following gene: 78065984

Centisome position: 40.06

GC content: 67.05

Gene sequence:

>792_bases
ATGAACCTCACCTTGCAGGATGTCGCATGGCACCGGTCGGTCGGGCGGCTCATCGAGTCGCTCGATCAGCCGGGCTTCTG
GCTGGCGCTGATCCGGCTGATCGAGGAATACGTCGCGGTCGACAGCTGGGTCGCGCTGACGTTCGGCGACGGCCGCCCGC
AGGTGTTCGCCGAATGCCCGTACGAAGGCGGCGGCCCCGACCCGCTGTTCCGCGACTACGTGCAGGGCCTGTACCAGCTC
GACCCGTTCTACATCGCGAACCGCGACGCACCGAAGAGCGGCCTGTTCCGGCTGTCCGACGTTGCGCCCGAATGCTTCCG
CGATACCGAGTACTACACGCTGTATTTCACGCACAACGTCGTCGAGGACGAGGTGCAGTTCAACGTCGTGCTCGACGATG
CGCGCACGCTGTGCCTGTCGCTCGGCAGCAAGCGGCGCTTCAGCCCCGAGCAGGTGGCGCTGCTCGACCTGATCCGGCCG
TGGGTGGCCGGGCTGATGCGGCAGCGGCTCGCATTCGAGCCGGCCTCCGCGGACCATGCGCCGCCGCGCCGGCCCGGCGC
ACACGACGGCTTCGAGCAGGCGATGGCGCGGCTCGGCACGCCGCTCACCGCGCGCGAACTCGACGTGATCCGGTTGATCC
TGAGCGGGCGCTCGAACAAGGAAGTCGCGAACAAGCTGGCGATATCCGCCGAAACGGTCAAGGTGCATCGCCGCAACATC
TACGGAAAGCTCGCCATCAACTCGCAGTCGGAGCTGTTCTCGCTGTTCCTGAACGCGCAGACCGGCACCTGA

Upstream 100 bases:

>100_bases
CTCCGTTCGATGCGCGCGGGAACCGGCCCGCGAGCCCGTAGCGTACACGCACGGCGCGGCACCGCAAGCGCGCATCGCAC
CTGCCGACATGGACCTACGC

Downstream 100 bases:

>100_bases
ACACCTGAAATGCAGCGCGGGGCACGCGTGTCGGCGCGCGCCATCACCGGCGGCGTCACAGATCAATACCCCCGAAGGGT
TAACGCGCCGGCGGGATGGG

Product: LuxR family transcriptional regulator

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MNLTLQDVAWHRSVGRLIESLDQPGFWLALIRLIEEYVAVDSWVALTFGDGRPQVFAECPYEGGGPDPLFRDYVQGLYQL
DPFYIANRDAPKSGLFRLSDVAPECFRDTEYYTLYFTHNVVEDEVQFNVVLDDARTLCLSLGSKRRFSPEQVALLDLIRP
WVAGLMRQRLAFEPASADHAPPRRPGAHDGFEQAMARLGTPLTARELDVIRLILSGRSNKEVANKLAISAETVKVHRRNI
YGKLAINSQSELFSLFLNAQTGT

Sequences:

>Translated_263_residues
MNLTLQDVAWHRSVGRLIESLDQPGFWLALIRLIEEYVAVDSWVALTFGDGRPQVFAECPYEGGGPDPLFRDYVQGLYQL
DPFYIANRDAPKSGLFRLSDVAPECFRDTEYYTLYFTHNVVEDEVQFNVVLDDARTLCLSLGSKRRFSPEQVALLDLIRP
WVAGLMRQRLAFEPASADHAPPRRPGAHDGFEQAMARLGTPLTARELDVIRLILSGRSNKEVANKLAISAETVKVHRRNI
YGKLAINSQSELFSLFLNAQTGT
>Mature_263_residues
MNLTLQDVAWHRSVGRLIESLDQPGFWLALIRLIEEYVAVDSWVALTFGDGRPQVFAECPYEGGGPDPLFRDYVQGLYQL
DPFYIANRDAPKSGLFRLSDVAPECFRDTEYYTLYFTHNVVEDEVQFNVVLDDARTLCLSLGSKRRFSPEQVALLDLIRP
WVAGLMRQRLAFEPASADHAPPRRPGAHDGFEQAMARLGTPLTARELDVIRLILSGRSNKEVANKLAISAETVKVHRRNI
YGKLAINSQSELFSLFLNAQTGT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH luxR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016032
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE [H]

EC number: NA

Molecular weight: Translated: 29645; Mature: 29645

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLTLQDVAWHRSVGRLIESLDQPGFWLALIRLIEEYVAVDSWVALTFGDGRPQVFAECP
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCEEEECC
YEGGGPDPLFRDYVQGLYQLDPFYIANRDAPKSGLFRLSDVAPECFRDTEYYTLYFTHNV
CCCCCCCHHHHHHHHHHHHCCCEEEECCCCCHHCCEEHHHCCHHHHCCCCEEEEEEECCE
VEDEVQFNVVLDDARTLCLSLGSKRRFSPEQVALLDLIRPWVAGLMRQRLAFEPASADHA
ECCCEEEEEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PPRRPGAHDGFEQAMARLGTPLTARELDVIRLILSGRSNKEVANKLAISAETVKVHRRNI
CCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC
YGKLAINSQSELFSLFLNAQTGT
EEEEEECCHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNLTLQDVAWHRSVGRLIESLDQPGFWLALIRLIEEYVAVDSWVALTFGDGRPQVFAECP
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCEEEECC
YEGGGPDPLFRDYVQGLYQLDPFYIANRDAPKSGLFRLSDVAPECFRDTEYYTLYFTHNV
CCCCCCCHHHHHHHHHHHHCCCEEEECCCCCHHCCEEHHHCCHHHHCCCCEEEEEEECCE
VEDEVQFNVVLDDARTLCLSLGSKRRFSPEQVALLDLIRPWVAGLMRQRLAFEPASADHA
ECCCEEEEEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PPRRPGAHDGFEQAMARLGTPLTARELDVIRLILSGRSNKEVANKLAISAETVKVHRRNI
CCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC
YGKLAINSQSELFSLFLNAQTGT
EEEEEECCHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7789814 [H]