Click here to switch to the map view.

The map label for this gene is ynbB [H]

Identifier: 78065988

GI number: 78065988

Start: 1481668

End: 1482597

Strand: Reverse

Name: ynbB [H]

Synonym: Bcep18194_A4517

Alternate gene names: 78065988

Gene position: 1482597-1481668 (Counterclockwise)

Preceding gene: 78065989

Following gene: 78065985

Centisome position: 40.13

GC content: 63.55

Gene sequence:

>930_bases
ATGCGAACAATTTTCTGGGAACTGGTCGCGGGCGTCACGGGCGTGCTCGTCGTCGCGACCGTGATCGGCGCGATCCTCGG
CGCGCGCAGCGGCGGCACGAGCGCGACCATCGTCAACCTGAACCAGCGCATCCGCGCGTGGTGGGCGATGATCGCGATCA
TGGCCATCGCGATCGGCCTCGGCAACAACATCACGTACCTGGTGTTCGCGGTGCTGTCCTACCTGACGCTGCGCGAATTC
ATCACGCTCACGCCAACCACCGCAAGCGACCATACGACGCTGTTCATCGCGTTCTTCGTCGCGATCCCCGTGCAATACCT
GTTGCTCGGGATCAACTGGTACGGGATGTATTCGATCTTCGTGCCCGTGCACCTGTTCTTCGCGATGTCGCTCGTATCGG
CACTCACGCAGGACACGCGCGAATTCCTGAGCCGCAACGCGAAGATCAACTGGGCGCTGATGGTGTGCGTGTACGGGTTG
AGCCACGCGCCGGCCGTACTGATCCTCGACATTCCGCACTACGCGGGGCAGAACGCGCTGCTGCTGTTCTTCTTCCTGTT
CGTCGTGCAGATCAGCGACGTGCTGCAGTACGTGGTCGGCAAGCTGTTCGGCAAGCGCAAGATTGCGCCGCAGCTGTCGC
CGTCGAAGACGATCGAAGGGTTCGTCGGCGGCGGCTTGCTGGCCACGCTGTGCGGCGCATCGCTGTATCGCGTGACGCCG
TTCAGCTTCGGATCGGCATTCGGCATCTCGCTCGCGATCGTGATCGCGGGCTTCGTCGGCGGCCTCGTGCTGTCGGCCGT
CAAGCGCTCGCTCGGCACCAAGGACTGGGGCTCGATGATCGCAGGCCACGGCGGGATGCTCGATCGCGTCGACTCGATCT
GCTTCGCCGCGCCGGTGTTCTTCCACCTCGTGCGGTATCTGTACGTGTGA

Upstream 100 bases:

>100_bases
TTCCTCGCCCGCATGCGCGACGCAGTCGTCGCGCTCGCGCCGCCGCAGCGGCCGGCCGGCTGAACGCGGCGCCCTCTTCT
CCCCTTTCCGGATATCAACA

Downstream 100 bases:

>100_bases
TGCGCGGGCGGCGCAACGCCGCCCGTTCCGGTGCGCGAAGGATCAGTACCCTTCGCGCAATGCCTTCGGCACGACGTAGC
GGCCACGCGCCGCGTCGAAC

Product: phosphatidate cytidylyltransferase

Products: diphosphate; CDPdiacylglycerol

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MRTIFWELVAGVTGVLVVATVIGAILGARSGGTSATIVNLNQRIRAWWAMIAIMAIAIGLGNNITYLVFAVLSYLTLREF
ITLTPTTASDHTTLFIAFFVAIPVQYLLLGINWYGMYSIFVPVHLFFAMSLVSALTQDTREFLSRNAKINWALMVCVYGL
SHAPAVLILDIPHYAGQNALLLFFFLFVVQISDVLQYVVGKLFGKRKIAPQLSPSKTIEGFVGGGLLATLCGASLYRVTP
FSFGSAFGISLAIVIAGFVGGLVLSAVKRSLGTKDWGSMIAGHGGMLDRVDSICFAAPVFFHLVRYLYV

Sequences:

>Translated_309_residues
MRTIFWELVAGVTGVLVVATVIGAILGARSGGTSATIVNLNQRIRAWWAMIAIMAIAIGLGNNITYLVFAVLSYLTLREF
ITLTPTTASDHTTLFIAFFVAIPVQYLLLGINWYGMYSIFVPVHLFFAMSLVSALTQDTREFLSRNAKINWALMVCVYGL
SHAPAVLILDIPHYAGQNALLLFFFLFVVQISDVLQYVVGKLFGKRKIAPQLSPSKTIEGFVGGGLLATLCGASLYRVTP
FSFGSAFGISLAIVIAGFVGGLVLSAVKRSLGTKDWGSMIAGHGGMLDRVDSICFAAPVFFHLVRYLYV
>Mature_309_residues
MRTIFWELVAGVTGVLVVATVIGAILGARSGGTSATIVNLNQRIRAWWAMIAIMAIAIGLGNNITYLVFAVLSYLTLREF
ITLTPTTASDHTTLFIAFFVAIPVQYLLLGINWYGMYSIFVPVHLFFAMSLVSALTQDTREFLSRNAKINWALMVCVYGL
SHAPAVLILDIPHYAGQNALLLFFFLFVVQISDVLQYVVGKLFGKRKIAPQLSPSKTIEGFVGGGLLATLCGASLYRVTP
FSFGSAFGISLAIVIAGFVGGLVLSAVKRSLGTKDWGSMIAGHGGMLDRVDSICFAAPVFFHLVRYLYV

Specific function: Unknown

COG id: COG4589

COG function: function code R; Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDS family [H]

Homologues:

Organism=Escherichia coli, GI1787677, Length=305, Percent_Identity=36.3934426229508, Blast_Score=166, Evalue=2e-42,
Organism=Escherichia coli, GI87081696, Length=135, Percent_Identity=40.7407407407407, Blast_Score=91, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000374 [H]

Pfam domain/function: PF01148 CTP_transf_1 [H]

EC number: 2.7.7.41

Molecular weight: Translated: 33507; Mature: 33507

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTIFWELVAGVTGVLVVATVIGAILGARSGGTSATIVNLNQRIRAWWAMIAIMAIAIGL
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHC
GNNITYLVFAVLSYLTLREFITLTPTTASDHTTLFIAFFVAIPVQYLLLGINWYGMYSIF
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
VPVHLFFAMSLVSALTQDTREFLSRNAKINWALMVCVYGLSHAPAVLILDIPHYAGQNAL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCHHH
LLFFFLFVVQISDVLQYVVGKLFGKRKIAPQLSPSKTIEGFVGGGLLATLCGASLYRVTP
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCHHHHHHHHCCHHHEECC
FSFGSAFGISLAIVIAGFVGGLVLSAVKRSLGTKDWGSMIAGHGGMLDRVDSICFAAPVF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHH
FHLVRYLYV
HHHHHHHHC
>Mature Secondary Structure
MRTIFWELVAGVTGVLVVATVIGAILGARSGGTSATIVNLNQRIRAWWAMIAIMAIAIGL
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHC
GNNITYLVFAVLSYLTLREFITLTPTTASDHTTLFIAFFVAIPVQYLLLGINWYGMYSIF
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
VPVHLFFAMSLVSALTQDTREFLSRNAKINWALMVCVYGLSHAPAVLILDIPHYAGQNAL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCHHH
LLFFFLFVVQISDVLQYVVGKLFGKRKIAPQLSPSKTIEGFVGGGLLATLCGASLYRVTP
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCHHHHHHHHCCHHHEECC
FSFGSAFGISLAIVIAGFVGGLVLSAVKRSLGTKDWGSMIAGHGGMLDRVDSICFAAPVF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHH
FHLVRYLYV
HHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: CTP; phosphatidate

Specific reaction: CTP + phosphatidate = diphosphate + CDP-diacylglycerol

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503; 9097039 [H]