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The map label for this gene is yraR [H]

Identifier: 78065848

GI number: 78065848

Start: 1335267

End: 1336001

Strand: Direct

Name: yraR [H]

Synonym: Bcep18194_A4377

Alternate gene names: 78065848

Gene position: 1335267-1336001 (Clockwise)

Preceding gene: 78065846

Following gene: 78065850

Centisome position: 36.15

GC content: 68.71

Gene sequence:

>735_bases
ATGTTGGAAGGTTGTCGGCGCCGAGTCGGCCGACGATCATGTGGGAAGCCGGAAACCGGGCCGTTCCCGGCTCGCCAACG
CAGGCTCCACACGGAAGAACCGGACATGAAATTGCTGCTCGTCGGCGCGACCGGACTTGTCGGGCGTCACGTCCTCGAAG
TCGCGCTCGCCGATGCGCGGGTCGATCAGGTGATCGTCCTCGCGCGCCGCCCGTTGTCGCCGCACCCGAAGATGCGCGCG
CTCGAGGTCGATTTCGATCATCTGCCCGACGCGGCCGACTGGTGGCATGCCGATGCCGTGATCTGCGCGCTTGGCACCAC
GATGCGGGCCGCAGGCTCTCAGGCGGCATTCCGGCGTGTCGACCACGACTATCCGCTCGCGGTCGCGCGGCTCGCGCACC
GCTACGGCACGCCGGCTTACGTGCTGAATTCCGCACTCGGCGCGGATCCGGCGTCGCGCATCTTCTACAACCGCGTGAAG
GGTGAGGTCGAGCAGGCGCTCGCCGGTGTCGGGTTTGCGTCGCTCACTTGTGTGCGGCCCGGCCTGATCGGCGGCAGCCG
CGACGAATTCAGGTTCGGCGAGCGGCTGCTGGTGTCCGCGTTGAACGTGGCCGGCCCCGTGTTGCCGGCGAAGTGGCGCG
TGAATCCCGCGTCGCGGATCGCCCGCGCGATGCTCGACGCGGCAATCGACGCGCGGCCGGGTATGCAGGTCATCGCGTCG
GACCAGCTCGTCTGA

Upstream 100 bases:

>100_bases
AGTAGAAAGTGCGACGAATTGAAGCGTGGGCGAACTGTGGCCGATGGCGTGCCACATCCATTTAGAGATATGGATTGAGC
GTGGTCTGTAACTTTTCGAG

Downstream 100 bases:

>100_bases
CGCGAACCGGGGCGGCGCGCGCCGGTCACTGATCTGCGAAACCGTCGAGCCCGCCGAACTGTTCGGCGAGCGCCGCCGTG
AACGCCTCCAGCGCTTCGCT

Product: nucleoside-diphosphate-sugar epimerase-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MLEGCRRRVGRRSCGKPETGPFPARQRRLHTEEPDMKLLLVGATGLVGRHVLEVALADARVDQVIVLARRPLSPHPKMRA
LEVDFDHLPDAADWWHADAVICALGTTMRAAGSQAAFRRVDHDYPLAVARLAHRYGTPAYVLNSALGADPASRIFYNRVK
GEVEQALAGVGFASLTCVRPGLIGGSRDEFRFGERLLVSALNVAGPVLPAKWRVNPASRIARAMLDAAIDARPGMQVIAS
DQLV

Sequences:

>Translated_244_residues
MLEGCRRRVGRRSCGKPETGPFPARQRRLHTEEPDMKLLLVGATGLVGRHVLEVALADARVDQVIVLARRPLSPHPKMRA
LEVDFDHLPDAADWWHADAVICALGTTMRAAGSQAAFRRVDHDYPLAVARLAHRYGTPAYVLNSALGADPASRIFYNRVK
GEVEQALAGVGFASLTCVRPGLIGGSRDEFRFGERLLVSALNVAGPVLPAKWRVNPASRIARAMLDAAIDARPGMQVIAS
DQLV
>Mature_244_residues
MLEGCRRRVGRRSCGKPETGPFPARQRRLHTEEPDMKLLLVGATGLVGRHVLEVALADARVDQVIVLARRPLSPHPKMRA
LEVDFDHLPDAADWWHADAVICALGTTMRAAGSQAAFRRVDHDYPLAVARLAHRYGTPAYVLNSALGADPASRIFYNRVK
GEVEQALAGVGFASLTCVRPGLIGGSRDEFRFGERLLVSALNVAGPVLPAKWRVNPASRIARAMLDAAIDARPGMQVIAS
DQLV

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To yeast YER004W [H]

Homologues:

Organism=Homo sapiens, GI148728166, Length=235, Percent_Identity=32.3404255319149, Blast_Score=96, Evalue=4e-20,
Organism=Homo sapiens, GI148728172, Length=206, Percent_Identity=33.0097087378641, Blast_Score=93, Evalue=2e-19,
Organism=Homo sapiens, GI148728168, Length=206, Percent_Identity=33.0097087378641, Blast_Score=93, Evalue=2e-19,
Organism=Homo sapiens, GI148728164, Length=206, Percent_Identity=33.0097087378641, Blast_Score=93, Evalue=2e-19,
Organism=Escherichia coli, GI87082218, Length=215, Percent_Identity=34.8837209302326, Blast_Score=111, Evalue=5e-26,
Organism=Caenorhabditis elegans, GI71983631, Length=210, Percent_Identity=37.1428571428571, Blast_Score=131, Evalue=3e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000534 [H]

Pfam domain/function: PF01118 Semialdhyde_dh [H]

EC number: NA

Molecular weight: Translated: 26523; Mature: 26523

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEGCRRRVGRRSCGKPETGPFPARQRRLHTEEPDMKLLLVGATGLVGRHVLEVALADAR
CCCHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHH
VDQVIVLARRPLSPHPKMRALEVDFDHLPDAADWWHADAVICALGTTMRAAGSQAAFRRV
HHHHHEEECCCCCCCCCCEEEECCHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHC
DHDYPLAVARLAHRYGTPAYVLNSALGADPASRIFYNRVKGEVEQALAGVGFASLTCVRP
CCCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC
GLIGGSRDEFRFGERLLVSALNVAGPVLPAKWRVNPASRIARAMLDAAIDARPGMQVIAS
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEECC
DQLV
CCCC
>Mature Secondary Structure
MLEGCRRRVGRRSCGKPETGPFPARQRRLHTEEPDMKLLLVGATGLVGRHVLEVALADAR
CCCHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHH
VDQVIVLARRPLSPHPKMRALEVDFDHLPDAADWWHADAVICALGTTMRAAGSQAAFRRV
HHHHHEEECCCCCCCCCCEEEECCHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHC
DHDYPLAVARLAHRYGTPAYVLNSALGADPASRIFYNRVKGEVEQALAGVGFASLTCVRP
CCCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC
GLIGGSRDEFRFGERLLVSALNVAGPVLPAKWRVNPASRIARAMLDAAIDARPGMQVIAS
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEECC
DQLV
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]