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The map label for this gene is ycdJ [C]

Identifier: 78065752

GI number: 78065752

Start: 1216843

End: 1217904

Strand: Direct

Name: ycdJ [C]

Synonym: Bcep18194_A4280

Alternate gene names: 78065752

Gene position: 1216843-1217904 (Clockwise)

Preceding gene: 78065748

Following gene: 78065754

Centisome position: 32.94

GC content: 67.51

Gene sequence:

>1062_bases
ATGCTTTCGATTCGCAAGATGTTGTTTGCCGCGCGCGCCGCCGTGCTCGGCGCGGGTGTCGCCGTCGCGTGCGCCATGCC
CGCCATGGCGGCCGCCGTTTCGCCCGCTGGTAACGACGGGCCCGTGTATGGCCCGCGCCTCGAAGGGTTCACTTATCCGG
CGCCCGTTCATCTGTACACGTTCGTGTCGCAGCGCGAAACGCTCGAGATGGCGTACCTCGACGTGCAGCCGGCACACCCG
AACGGCCGCACCGTCGTGCTGCTGCACGGGAAGAACTTCTGCGCGGCGACCTGGGAGGACACGATCGGCGTGCTGAGCCG
TGCCGGCTATCGCGTGATCGCACCGGACCAGATCGGCTTCTGCAAGTCGTCGAAGCCCGATCGTTATCAGTACAGCTTCC
AGCAGCTGGCGCGCAACACGCACGCGCTGCTCGAATCGATGGGGGTGAAGTCGGCGACGATCGTCGGCCACTCGACGGGC
GGGATGCTCGCGATGCGCTACGCGCTGATGTATCCGAAGGCGACCGACCAGCTCGTGCTCGTGAACCCGATCGGCCTCGA
GGACTGGAAGGCGCTCGGCGTGCCGCCGCTGTCGGTCGACTACTGGTATGCACGCGAACTGAAGACCACGGCAGACGGCA
TCCGCCGCTACGAGCAGGGCACGTACTACGCGGGCAAGTGGTCGCCGTCGTACGAGCGCTGGGTGCAGATGCTGGCCGGG
ATGTACCGTGGCGCCGGTCGCGACGCGGTCGCGTGGAACTCCGCGCTGATCTACGACATGATCCTCACGCAGCCGGTGGT
CTATGAACTCGGTGCGATCCGCGTGCCGACGCTGCTGATGATCGGCGACAAGGACACGACCGCGATCGGCAAGGACGTCT
CGCCGCCCGACGTGCATGCGAAGCTCGGCCACTATCCGGAGCTCGCGAAGCGCACGCAGGCCGCGATTCCCGGCGCCCAG
CTCGTCGAGTTCCCGGCGCTCGGGCACGCGCCGCAGATCCAGGACCCGGACGCGTTCCACAAGGCGCTGCTCGACGGGCT
GGAGGCCGTGCACCCGCAGTGA

Upstream 100 bases:

>100_bases
GCCCCGGAGTGTTGCGCGCCGTCGTCAGCGCGACCGCGTAGAATCGCGGGGCGCGAGGCGGCCCGGCCGCCCGCGTGCGT
CTCCAATCACCGTGATCGCC

Downstream 100 bases:

>100_bases
TGCGGGGCCGGCCGCAGGCGGCCCGGGCGCGCGCCGTCAGCGCGTTTCGCTCGCGAGCTCGTCGCGGATCTGCGCAGTCA
ATTCGAACGAGCGCAGCCGT

Product: Alpha/beta hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MLSIRKMLFAARAAVLGAGVAVACAMPAMAAAVSPAGNDGPVYGPRLEGFTYPAPVHLYTFVSQRETLEMAYLDVQPAHP
NGRTVVLLHGKNFCAATWEDTIGVLSRAGYRVIAPDQIGFCKSSKPDRYQYSFQQLARNTHALLESMGVKSATIVGHSTG
GMLAMRYALMYPKATDQLVLVNPIGLEDWKALGVPPLSVDYWYARELKTTADGIRRYEQGTYYAGKWSPSYERWVQMLAG
MYRGAGRDAVAWNSALIYDMILTQPVVYELGAIRVPTLLMIGDKDTTAIGKDVSPPDVHAKLGHYPELAKRTQAAIPGAQ
LVEFPALGHAPQIQDPDAFHKALLDGLEAVHPQ

Sequences:

>Translated_353_residues
MLSIRKMLFAARAAVLGAGVAVACAMPAMAAAVSPAGNDGPVYGPRLEGFTYPAPVHLYTFVSQRETLEMAYLDVQPAHP
NGRTVVLLHGKNFCAATWEDTIGVLSRAGYRVIAPDQIGFCKSSKPDRYQYSFQQLARNTHALLESMGVKSATIVGHSTG
GMLAMRYALMYPKATDQLVLVNPIGLEDWKALGVPPLSVDYWYARELKTTADGIRRYEQGTYYAGKWSPSYERWVQMLAG
MYRGAGRDAVAWNSALIYDMILTQPVVYELGAIRVPTLLMIGDKDTTAIGKDVSPPDVHAKLGHYPELAKRTQAAIPGAQ
LVEFPALGHAPQIQDPDAFHKALLDGLEAVHPQ
>Mature_353_residues
MLSIRKMLFAARAAVLGAGVAVACAMPAMAAAVSPAGNDGPVYGPRLEGFTYPAPVHLYTFVSQRETLEMAYLDVQPAHP
NGRTVVLLHGKNFCAATWEDTIGVLSRAGYRVIAPDQIGFCKSSKPDRYQYSFQQLARNTHALLESMGVKSATIVGHSTG
GMLAMRYALMYPKATDQLVLVNPIGLEDWKALGVPPLSVDYWYARELKTTADGIRRYEQGTYYAGKWSPSYERWVQMLAG
MYRGAGRDAVAWNSALIYDMILTQPVVYELGAIRVPTLLMIGDKDTTAIGKDVSPPDVHAKLGHYPELAKRTQAAIPGAQ
LVEFPALGHAPQIQDPDAFHKALLDGLEAVHPQ

Specific function: Unknown

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dmpD/todF/xylF esterase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR000639 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 38477; Mature: 38477

Theoretical pI: Translated: 8.08; Mature: 8.08

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSIRKMLFAARAAVLGAGVAVACAMPAMAAAVSPAGNDGPVYGPRLEGFTYPAPVHLYT
CCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEE
FVSQRETLEMAYLDVQPAHPNGRTVVLLHGKNFCAATWEDTIGVLSRAGYRVIAPDQIGF
HHHHHHEEEEEEEEEECCCCCCCEEEEEECCCCEEECHHHHHHHHHHCCCEEECCCCCCC
CKSSKPDRYQYSFQQLARNTHALLESMGVKSATIVGHSTGGMLAMRYALMYPKATDQLVL
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCEEE
VNPIGLEDWKALGVPPLSVDYWYARELKTTADGIRRYEQGTYYAGKWSPSYERWVQMLAG
EECCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHH
MYRGAGRDAVAWNSALIYDMILTQPVVYELGAIRVPTLLMIGDKDTTAIGKDVSPPDVHA
HHCCCCCCCCCCCHHHHHHHHHHCHHHHHHCCCCCCEEEEECCCCCHHCCCCCCCCCHHH
KLGHYPELAKRTQAAIPGAQLVEFPALGHAPQIQDPDAFHKALLDGLEAVHPQ
HCCCCHHHHHHHHHCCCCHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLSIRKMLFAARAAVLGAGVAVACAMPAMAAAVSPAGNDGPVYGPRLEGFTYPAPVHLYT
CCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEE
FVSQRETLEMAYLDVQPAHPNGRTVVLLHGKNFCAATWEDTIGVLSRAGYRVIAPDQIGF
HHHHHHEEEEEEEEEECCCCCCCEEEEEECCCCEEECHHHHHHHHHHCCCEEECCCCCCC
CKSSKPDRYQYSFQQLARNTHALLESMGVKSATIVGHSTGGMLAMRYALMYPKATDQLVL
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCEEE
VNPIGLEDWKALGVPPLSVDYWYARELKTTADGIRRYEQGTYYAGKWSPSYERWVQMLAG
EECCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHH
MYRGAGRDAVAWNSALIYDMILTQPVVYELGAIRVPTLLMIGDKDTTAIGKDVSPPDVHA
HHCCCCCCCCCCCHHHHHHHHHHCHHHHHHCCCCCCEEEEECCCCCHHCCCCCCCCCHHH
KLGHYPELAKRTQAAIPGAQLVEFPALGHAPQIQDPDAFHKALLDGLEAVHPQ
HCCCCHHHHHHHHHCCCCHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]