| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78065754
Identifier: 78065754
GI number: 78065754
Start: 1219579
End: 1220754
Strand: Direct
Name: 78065754
Synonym: Bcep18194_A4282
Alternate gene names: NA
Gene position: 1219579-1220754 (Clockwise)
Preceding gene: 78065752
Following gene: 78065755
Centisome position: 33.01
GC content: 71.0
Gene sequence:
>1176_bases ATGACGGCAACCGCAACGATGCTCGACTGGCTCCTGATCGTCTTCACGCTGGCCGCGGCCGGCTATGCGCTCGTCGCCGC GTTCGCCCCGCGGCCGCGTACGCCGCGCACGGCCGTGCGCGACGGCTTCGAGCCGGTCAGCGTGCTCAAGCCGCTGTGCG GCGCGGAGCCGCACCTGTACGAAAACCTCGCGACGTTCTGCGAGCAGCGCCATCCGCGGTATGAAGTGCTGTTCGGCGTC GCGTCGGCGGTCGATCCGGCCATCGCCGTGGTCGAACGGCTGCGCGCCGATTATCCCGAGTGCGACATCACGCTCGTGAT CGATGCGCGCGTGCACGGCAAGAACCTGAAGGTCAGCAACCTGATCAACCTCGCCGAGCGTGCGAAGTACGGCCGCATCG TGATCGCGGACAGCGACATCGCGGTGAAGCCCGACTATCTGGAGCGCGTGACGGCGCCGCTCGCCGACGTGTCGGTGGGT GTCGTCACGTGCCTGTATCATGCGCGCAGCGTCGGCGGGTTCTGGACGCGGATCGGCGCGCAGTTCGTCGACGCATGGTT CGCGCCGTCGGTCCGGATCACGCACCTCGGCCGTTCGACCCGCTTCGGCTTCGGCGCGACGCTTGCGCTGACGCGCGACA CGCTCGACCGGATCGGCGGCTTTCCCGCGCTGAAGGACGAACTGGCCGACGATTTCTGGCTGGCCGAGCTGCCGCGCCGC CTCGGGCGACGCACCGTGCTGTCGGAGGTCGAGGTCGCGACCGACGTGATCGAGCCGTCGTTCGGGCCGCTGTGGCACCG CGAGACGCGCTGGCTGCGCACGATCCGTTCGCTGAACCCGGCTGGCTTCGCGTTCCTGTTCATTACGTTTACCGTGCCGT GGCTCGCGATCGGCGCGGCGCTCGCGCTGCGCCTCGACGGCACCTTCGCGGGCTCGCTGGCGGGCTGGGCGGCCGTGGTG GGCGCGTTCGGGCGGCTCGTGCTGCACGCCCGCGGCGAGGACGGCTGGCGCGCGTTCTGGCGCGACCTGCCGCTCGTCGC GGTGCGCGACACACTGCTCGCGCTCGAGTGGCTCGCCGCGGTGTTCGGCACGCACGTCGTGTGGCGCGGCGCGAGGATGA CGGTCGTCGGCGGCGAGCGCGCGACGGCGGCAGTGGAAGCAGTGGACGGCCGCTAG
Upstream 100 bases:
>100_bases GTCGGGTCGTGCCCGCGTTCGTCGTTGTCGGAATACCGAATCACGCTCAATCACGCACAAGCGTTCTCCATGGCGTTCAG GTCGCCGGGAGGCGTCGCGC
Downstream 100 bases:
>100_bases GGCCGTTCCGACCGAACCCGGCCCGAGGGCCGAGACGCGCTGCACGGCGAGGCCGTGCGGCGCGACATGACAGAGAGGCG GGCGCCGACAGGGCGGCCCG
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: Glycosyltransferase; Glycosyl Transferase Family Protein; Glucosyltransferase; Cell Wall Biosynthesis Glycosyltransferase-Like Protein; Glycosyl Transferase Group 2 Family; Glycosyl Transferase; Cell Wall Biosynthesis Glycosyltransferase; Glycosyl Transferase Group 2 Family Protein; Glycosyl Transferase Protein; Acyl-CoA Dehydrogenase-Like; Glycosyl Tranferase Homolog; Syl Transferase Group 2 Family Protein; Acyl-CoA Dehydrogenase-Like Protein; UDP-GlucoseCeramide Glycosyltransferase; Glycosyltransferase Family; Putatiave Glycosyltransferase; Family 2 Glycosyl Transferase
Number of amino acids: Translated: 391; Mature: 390
Protein sequence:
>391_residues MTATATMLDWLLIVFTLAAAGYALVAAFAPRPRTPRTAVRDGFEPVSVLKPLCGAEPHLYENLATFCEQRHPRYEVLFGV ASAVDPAIAVVERLRADYPECDITLVIDARVHGKNLKVSNLINLAERAKYGRIVIADSDIAVKPDYLERVTAPLADVSVG VVTCLYHARSVGGFWTRIGAQFVDAWFAPSVRITHLGRSTRFGFGATLALTRDTLDRIGGFPALKDELADDFWLAELPRR LGRRTVLSEVEVATDVIEPSFGPLWHRETRWLRTIRSLNPAGFAFLFITFTVPWLAIGAALALRLDGTFAGSLAGWAAVV GAFGRLVLHARGEDGWRAFWRDLPLVAVRDTLLALEWLAAVFGTHVVWRGARMTVVGGERATAAVEAVDGR
Sequences:
>Translated_391_residues MTATATMLDWLLIVFTLAAAGYALVAAFAPRPRTPRTAVRDGFEPVSVLKPLCGAEPHLYENLATFCEQRHPRYEVLFGV ASAVDPAIAVVERLRADYPECDITLVIDARVHGKNLKVSNLINLAERAKYGRIVIADSDIAVKPDYLERVTAPLADVSVG VVTCLYHARSVGGFWTRIGAQFVDAWFAPSVRITHLGRSTRFGFGATLALTRDTLDRIGGFPALKDELADDFWLAELPRR LGRRTVLSEVEVATDVIEPSFGPLWHRETRWLRTIRSLNPAGFAFLFITFTVPWLAIGAALALRLDGTFAGSLAGWAAVV GAFGRLVLHARGEDGWRAFWRDLPLVAVRDTLLALEWLAAVFGTHVVWRGARMTVVGGERATAAVEAVDGR >Mature_390_residues TATATMLDWLLIVFTLAAAGYALVAAFAPRPRTPRTAVRDGFEPVSVLKPLCGAEPHLYENLATFCEQRHPRYEVLFGVA SAVDPAIAVVERLRADYPECDITLVIDARVHGKNLKVSNLINLAERAKYGRIVIADSDIAVKPDYLERVTAPLADVSVGV VTCLYHARSVGGFWTRIGAQFVDAWFAPSVRITHLGRSTRFGFGATLALTRDTLDRIGGFPALKDELADDFWLAELPRRL GRRTVLSEVEVATDVIEPSFGPLWHRETRWLRTIRSLNPAGFAFLFITFTVPWLAIGAALALRLDGTFAGSLAGWAAVVG AFGRLVLHARGEDGWRAFWRDLPLVAVRDTLLALEWLAAVFGTHVVWRGARMTVVGGERATAAVEAVDGR
Specific function: Unknown
COG id: COG1215
COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4507811, Length=240, Percent_Identity=32.9166666666667, Blast_Score=109, Evalue=5e-24, Organism=Caenorhabditis elegans, GI25147526, Length=275, Percent_Identity=27.2727272727273, Blast_Score=105, Evalue=6e-23, Organism=Caenorhabditis elegans, GI32564728, Length=266, Percent_Identity=27.0676691729323, Blast_Score=92, Evalue=4e-19, Organism=Caenorhabditis elegans, GI25149577, Length=266, Percent_Identity=27.0676691729323, Blast_Score=92, Evalue=5e-19, Organism=Caenorhabditis elegans, GI25149574, Length=266, Percent_Identity=27.0676691729323, Blast_Score=92, Evalue=6e-19, Organism=Caenorhabditis elegans, GI25149580, Length=233, Percent_Identity=28.3261802575107, Blast_Score=91, Evalue=9e-19, Organism=Caenorhabditis elegans, GI32566973, Length=239, Percent_Identity=25.9414225941423, Blast_Score=90, Evalue=2e-18, Organism=Drosophila melanogaster, GI24657569, Length=238, Percent_Identity=30.2521008403361, Blast_Score=98, Evalue=8e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42873; Mature: 42742
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATATMLDWLLIVFTLAAAGYALVAAFAPRPRTPRTAVRDGFEPVSVLKPLCGAEPHLY CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHCCCCHHH ENLATFCEQRHPRYEVLFGVASAVDPAIAVVERLRADYPECDITLVIDARVHGKNLKVSN HHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCHHH LINLAERAKYGRIVIADSDIAVKPDYLERVTAPLADVSVGVVTCLYHARSVGGFWTRIGA HHHHHHHCCCCEEEEECCCCEECCHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHH QFVDAWFAPSVRITHLGRSTRFGFGATLALTRDTLDRIGGFPALKDELADDFWLAELPRR HHHHHHCCCCEEEEECCCCCCCCCCEEEEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHH LGRRTVLSEVEVATDVIEPSFGPLWHRETRWLRTIRSLNPAGFAFLFITFTVPWLAIGAA HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH LALRLDGTFAGSLAGWAAVVGAFGRLVLHARGEDGWRAFWRDLPLVAVRDTLLALEWLAA HHEEECCCHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHH VFGTHVVWRGARMTVVGGERATAAVEAVDGR HHHHHHHCCCCEEEEECCCHHHHHHHCCCCC >Mature Secondary Structure TATATMLDWLLIVFTLAAAGYALVAAFAPRPRTPRTAVRDGFEPVSVLKPLCGAEPHLY CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHCCCCHHH ENLATFCEQRHPRYEVLFGVASAVDPAIAVVERLRADYPECDITLVIDARVHGKNLKVSN HHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCHHH LINLAERAKYGRIVIADSDIAVKPDYLERVTAPLADVSVGVVTCLYHARSVGGFWTRIGA HHHHHHHCCCCEEEEECCCCEECCHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHH QFVDAWFAPSVRITHLGRSTRFGFGATLALTRDTLDRIGGFPALKDELADDFWLAELPRR HHHHHHCCCCEEEEECCCCCCCCCCEEEEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHH LGRRTVLSEVEVATDVIEPSFGPLWHRETRWLRTIRSLNPAGFAFLFITFTVPWLAIGAA HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH LALRLDGTFAGSLAGWAAVVGAFGRLVLHARGEDGWRAFWRDLPLVAVRDTLLALEWLAA HHEEECCCHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHH VFGTHVVWRGARMTVVGGERATAAVEAVDGR HHHHHHHCCCCEEEEECCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA