| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78065364
Identifier: 78065364
GI number: 78065364
Start: 807076
End: 808131
Strand: Reverse
Name: 78065364
Synonym: Bcep18194_A3890
Alternate gene names: NA
Gene position: 808131-807076 (Counterclockwise)
Preceding gene: 78065365
Following gene: 78065363
Centisome position: 21.88
GC content: 69.13
Gene sequence:
>1056_bases ATGAACCGGCAGCAATCCACGCGCAGCTCCGCCTACCCGCCTCAGCCTCCCCGCGAGCGCGGCACCTGGCGCGCATTCGC GCTCGCCGCGCTGATGCACGTGCTGCTCGCGCTGTTTCTCTATCACGGCGTGCAGTGGCAGAACAGCACGCCGGCCGGCG CCGAAGCCGAGCTGTGGACCGAGGTGCCGGATGTCCCCGCGCCGCGGCCCGTCGTCACACCCACACCGCCCGTGAAGGTC GCGCCGCCCCCTCCCCCGGTGCGCGACGAGCAGGCCGACATCGCGCTGCAGCAGAAGAAGCGGCAGCAGGAAGCGGCCGC GCGTGAAGCGCTGCTCGAGCAGCAGCGCCGCGCGCAGCAACTGAAGGCCCAGCAGGAAGACGAAGCCCGGCGCGCGCAGC TCGCGGCGCAGCAGGCAGCCGCACTCGCCGCGCAGAAGGCCGCGGAACGCGACAAGCAGAAGCAGGCCGACAAGCTCAAG CAACAGCAGCTCGCCGAGCAGCAAAAGCTCGAACAGCAGAAACTTCAGCAGCAGAAACAGGCGCAGCTCGAAGCGCAGCA GGCGGCGAAGGCGAAGGCCGACGCGGCCGCGAAGGCAAAGGCGGAAGCCCAGGCCAAGGCGAAGGCCGAAGCCACGGCGC GCGCGAAGGCCAATGCGGCAGCGAACGCCAAGCTCGACCGCGAGCGCAGCGCACGCCTGGCACAGATGCAGGGCCTGTCC GGCGCCGGTGAAGGCGGCGGCGAAGGCCTCGCGAAAAGTGGCACGGGCACGGGCTCCGGCGGCAATGCCGCCACGCCCGG CTATGCCGACAAGGTGCGCCGCCGCGTCAAACCGAACATCGTTTGGGGCGGCGAGCGAGCAGGCCTGACCACCGTCGTCA AGATTCGGTGCACGCCGTCCGGTGACGTATTGAGCGCATCGGTTTCCCGCTCCAGCGGGAATTCGGGGTGGGATCAAGCC GTGGTCAATGCAATCCACGCATCGGTCCCGTTGCCGCCCGATTCTAACGGTCGTACCCCGTCGGACATTACGATTACCTT CAAGGCAGCGGAGTGA
Upstream 100 bases:
>100_bases TCGCGGCCGACAAGACCGTGCAGTACGATGCCGTCATGACCGTGATGTCCGATCTGAAGGCGCGCGGCGTCAAGCGCGTC GGCCTCCTCGTCAAATCGCA
Downstream 100 bases:
>100_bases AAGGAAATGCGCTTACACTCCGGGCGTCGCTGTCGGACGGGAACGAATCGGGTATTTTTACTGTCTCTGCCGTTGCGCAG CGATCCAAGCCATACGGGAA
Product: TonB/TolA-like protein
Products: NA
Alternate protein names: NB-Like Protein; Membrane Spanning Protein In lA-TolQ-TolR Complex; LA Family Protein; LA-Related Transport Transmembrane Protein; LA Protein; NB Protein
Number of amino acids: Translated: 351; Mature: 351
Protein sequence:
>351_residues MNRQQSTRSSAYPPQPPRERGTWRAFALAALMHVLLALFLYHGVQWQNSTPAGAEAELWTEVPDVPAPRPVVTPTPPVKV APPPPPVRDEQADIALQQKKRQQEAAAREALLEQQRRAQQLKAQQEDEARRAQLAAQQAAALAAQKAAERDKQKQADKLK QQQLAEQQKLEQQKLQQQKQAQLEAQQAAKAKADAAAKAKAEAQAKAKAEATARAKANAAANAKLDRERSARLAQMQGLS GAGEGGGEGLAKSGTGTGSGGNAATPGYADKVRRRVKPNIVWGGERAGLTTVVKIRCTPSGDVLSASVSRSSGNSGWDQA VVNAIHASVPLPPDSNGRTPSDITITFKAAE
Sequences:
>Translated_351_residues MNRQQSTRSSAYPPQPPRERGTWRAFALAALMHVLLALFLYHGVQWQNSTPAGAEAELWTEVPDVPAPRPVVTPTPPVKV APPPPPVRDEQADIALQQKKRQQEAAAREALLEQQRRAQQLKAQQEDEARRAQLAAQQAAALAAQKAAERDKQKQADKLK QQQLAEQQKLEQQKLQQQKQAQLEAQQAAKAKADAAAKAKAEAQAKAKAEATARAKANAAANAKLDRERSARLAQMQGLS GAGEGGGEGLAKSGTGTGSGGNAATPGYADKVRRRVKPNIVWGGERAGLTTVVKIRCTPSGDVLSASVSRSSGNSGWDQA VVNAIHASVPLPPDSNGRTPSDITITFKAAE >Mature_351_residues MNRQQSTRSSAYPPQPPRERGTWRAFALAALMHVLLALFLYHGVQWQNSTPAGAEAELWTEVPDVPAPRPVVTPTPPVKV APPPPPVRDEQADIALQQKKRQQEAAAREALLEQQRRAQQLKAQQEDEARRAQLAAQQAAALAAQKAAERDKQKQADKLK QQQLAEQQKLEQQKLQQQKQAQLEAQQAAKAKADAAAKAKAEAQAKAKAEATARAKANAAANAKLDRERSARLAQMQGLS GAGEGGGEGLAKSGTGTGSGGNAATPGYADKVRRRVKPNIVWGGERAGLTTVVKIRCTPSGDVLSASVSRSSGNSGWDQA VVNAIHASVPLPPDSNGRTPSDITITFKAAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37381; Mature: 37381
Theoretical pI: Translated: 10.71; Mature: 10.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRQQSTRSSAYPPQPPRERGTWRAFALAALMHVLLALFLYHGVQWQNSTPAGAEAELWT CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH EVPDVPAPRPVVTPTPPVKVAPPPPPVRDEQADIALQQKKRQQEAAAREALLEQQRRAQQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKAQQEDEARRAQLAAQQAAALAAQKAAERDKQKQADKLKQQQLAEQQKLEQQKLQQQKQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQLEAQQAAKAKADAAAKAKAEAQAKAKAEATARAKANAAANAKLDRERSARLAQMQGLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC GAGEGGGEGLAKSGTGTGSGGNAATPGYADKVRRRVKPNIVWGGERAGLTTVVKIRCTPS CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEECCCCCCCEEEEEEEECCC GDVLSASVSRSSGNSGWDQAVVNAIHASVPLPPDSNGRTPSDITITFKAAE CCEEEHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECC >Mature Secondary Structure MNRQQSTRSSAYPPQPPRERGTWRAFALAALMHVLLALFLYHGVQWQNSTPAGAEAELWT CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH EVPDVPAPRPVVTPTPPVKVAPPPPPVRDEQADIALQQKKRQQEAAAREALLEQQRRAQQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKAQQEDEARRAQLAAQQAAALAAQKAAERDKQKQADKLKQQQLAEQQKLEQQKLQQQKQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQLEAQQAAKAKADAAAKAKAEAQAKAKAEATARAKANAAANAKLDRERSARLAQMQGLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC GAGEGGGEGLAKSGTGTGSGGNAATPGYADKVRRRVKPNIVWGGERAGLTTVVKIRCTPS CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEECCCCCCCEEEEEEEECCC GDVLSASVSRSSGNSGWDQAVVNAIHASVPLPPDSNGRTPSDITITFKAAE CCEEEHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA