Click here to switch to the map view.

The map label for this gene is tolR [H]

Identifier: 78065365

GI number: 78065365

Start: 808128

End: 808577

Strand: Reverse

Name: tolR [H]

Synonym: Bcep18194_A3891

Alternate gene names: 78065365

Gene position: 808577-808128 (Counterclockwise)

Preceding gene: 78065366

Following gene: 78065364

Centisome position: 21.89

GC content: 65.33

Gene sequence:

>450_bases
ATGGCAGGAAGTCCCATCCGTTCCAGCATGCGCGGCGGCCGCTCGCGCCGCGCAATGGCCGACATCAACGTCGTGCCGTA
CATCGACGTGATGCTGGTGCTGCTCGTGATCTTCATGGTCACCGCACCGCTCGTCGCCCCGTCGATCATCAACCTGCCGA
CCGTCGGCAACGCCGCGCCGCAGGAGCAGACGCCGCCCGTCGTCGTCAACATCAAGGCCGACCGCACGATGAGCGTCAAG
TACAAGGGCGACTCGGGCGCGACCCAGGAAGACACGATGACGAAGGCCGAGCTCGACAGCTTCATCGTCGCCCGGCAGGC
TGACCATCCGGACCAGCCGGTCGTGATCGCGGCCGACAAGACCGTGCAGTACGATGCCGTCATGACCGTGATGTCCGATC
TGAAGGCGCGCGGCGTCAAGCGCGTCGGCCTCCTCGTCAAATCGCAATGA

Upstream 100 bases:

>100_bases
CGCTACGCGCACGACATCGACCGCCTCGCGATCCGTTTCGAGACCTTCATCGAAGAGTTCTCGAACATCCTGCAGCGTCA
GGCCCAGTAAGGAGCGCGCC

Downstream 100 bases:

>100_bases
ACCGGCAGCAATCCACGCGCAGCTCCGCCTACCCGCCTCAGCCTCCCCGCGAGCGCGGCACCTGGCGCGCATTCGCGCTC
GCCGCGCTGATGCACGTGCT

Product: biopolymer transport protein ExbD/TolR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 148

Protein sequence:

>149_residues
MAGSPIRSSMRGGRSRRAMADINVVPYIDVMLVLLVIFMVTAPLVAPSIINLPTVGNAAPQEQTPPVVVNIKADRTMSVK
YKGDSGATQEDTMTKAELDSFIVARQADHPDQPVVIAADKTVQYDAVMTVMSDLKARGVKRVGLLVKSQ

Sequences:

>Translated_149_residues
MAGSPIRSSMRGGRSRRAMADINVVPYIDVMLVLLVIFMVTAPLVAPSIINLPTVGNAAPQEQTPPVVVNIKADRTMSVK
YKGDSGATQEDTMTKAELDSFIVARQADHPDQPVVIAADKTVQYDAVMTVMSDLKARGVKRVGLLVKSQ
>Mature_148_residues
AGSPIRSSMRGGRSRRAMADINVVPYIDVMLVLLVIFMVTAPLVAPSIINLPTVGNAAPQEQTPPVVVNIKADRTMSVKY
KGDSGATQEDTMTKAELDSFIVARQADHPDQPVVIAADKTVQYDAVMTVMSDLKARGVKRVGLLVKSQ

Specific function: Involved in the tonB-independent uptake of proteins [H]

COG id: COG0848

COG function: function code U; Biopolymer transport protein

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbD/tolR family [H]

Homologues:

Organism=Escherichia coli, GI1789380, Length=129, Percent_Identity=41.0852713178295, Blast_Score=77, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014168
- InterPro:   IPR003400 [H]

Pfam domain/function: PF02472 ExbD [H]

EC number: NA

Molecular weight: Translated: 16022; Mature: 15891

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGSPIRSSMRGGRSRRAMADINVVPYIDVMLVLLVIFMVTAPLVAPSIINLPTVGNAAP
CCCCCCHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCC
QEQTPPVVVNIKADRTMSVKYKGDSGATQEDTMTKAELDSFIVARQADHPDQPVVIAADK
CCCCCCEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECC
TVQYDAVMTVMSDLKARGVKRVGLLVKSQ
CCHHHHHHHHHHHHHHCCHHHHHEEEECC
>Mature Secondary Structure 
AGSPIRSSMRGGRSRRAMADINVVPYIDVMLVLLVIFMVTAPLVAPSIINLPTVGNAAP
CCCCCHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCC
QEQTPPVVVNIKADRTMSVKYKGDSGATQEDTMTKAELDSFIVARQADHPDQPVVIAADK
CCCCCCEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECC
TVQYDAVMTVMSDLKARGVKRVGLLVKSQ
CCHHHHHHHHHHHHHHCCHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8955385; 10984043 [H]