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The map label for this gene is yrbD [C]

Identifier: 78064991

GI number: 78064991

Start: 382794

End: 383348

Strand: Direct

Name: yrbD [C]

Synonym: Bcep18194_A3514

Alternate gene names: 78064991

Gene position: 382794-383348 (Clockwise)

Preceding gene: 78064990

Following gene: 78064992

Centisome position: 10.36

GC content: 61.8

Gene sequence:

>555_bases
ATGAAAAAGACTGCTCTCGACTTCTGGGTCGGCCTGTTCGTGGTGGTGGGCTTCCTTGCGGTGCTGTTCCTGGCGCTGAA
GGTCGGCAACATGAGCTCGCTGTCGTTTCAGCCGACCTACTCGGTGAAGATGAAATTCGACAATATCGGCGGGCTCAAGC
CGCGTGCGGCCGTGAAGAGCGCGGGTGTCGTGGTCGGCCGCGTGAAGACGATCGGCTTCGACACGAATACGTATCAGGCA
CTTGTCACGATCGATGTCGACGGCCAGTATCAATTCCCGAAGGATTCGTCGGCGAAGATCCTGACGTCGGGCTTGCTCGG
CGAGCAATATATCGGTCTGGATCCGGGCGGTGACACCGAAATGCTGAAGACGGGCGATACGATCACGATGACGCAATCGG
CGATCGTGCTCGAAAACCTGATCGGCCAGTTCCTGTACAGCAAGGCTGCCGATGCGGGTGGGGCGAAGCCGGCAGCCGGT
GCGCCGGCTGCACCGGCACCGGTGGCGGTGCCGGCGTCGGCGGTGTCCGCTGCGTCCGGTTCGGCGGCCCAATAA

Upstream 100 bases:

>100_bases
GACGGTCGTGTTCGCGTCGCTCGCCGTACTCGGCCTCGATTTCCTGCTGACCGCGCTGATGTTCAGCTAAGCCTCAGCCA
AGCCAAATTTTGGGATGACG

Downstream 100 bases:

>100_bases
CCACACGAGAGAAAACAAGAGGGTAATGACCATGCAGACGATCCGCATCAGGCAGGCCGCGCTGGCGGTAGCGGCAGTCG
CCGCGTTGAGCGGCTGCGCG

Product: ABC transporter, inner membrane subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MKKTALDFWVGLFVVVGFLAVLFLALKVGNMSSLSFQPTYSVKMKFDNIGGLKPRAAVKSAGVVVGRVKTIGFDTNTYQA
LVTIDVDGQYQFPKDSSAKILTSGLLGEQYIGLDPGGDTEMLKTGDTITMTQSAIVLENLIGQFLYSKAADAGGAKPAAG
APAAPAPVAVPASAVSAASGSAAQ

Sequences:

>Translated_184_residues
MKKTALDFWVGLFVVVGFLAVLFLALKVGNMSSLSFQPTYSVKMKFDNIGGLKPRAAVKSAGVVVGRVKTIGFDTNTYQA
LVTIDVDGQYQFPKDSSAKILTSGLLGEQYIGLDPGGDTEMLKTGDTITMTQSAIVLENLIGQFLYSKAADAGGAKPAAG
APAAPAPVAVPASAVSAASGSAAQ
>Mature_184_residues
MKKTALDFWVGLFVVVGFLAVLFLALKVGNMSSLSFQPTYSVKMKFDNIGGLKPRAAVKSAGVVVGRVKTIGFDTNTYQA
LVTIDVDGQYQFPKDSSAKILTSGLLGEQYIGLDPGGDTEMLKTGDTITMTQSAIVLENLIGQFLYSKAADAGGAKPAAG
APAAPAPVAVPASAVSAASGSAAQ

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG1463

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaD family [H]

Homologues:

Organism=Escherichia coli, GI1789584, Length=170, Percent_Identity=48.2352941176471, Blast_Score=138, Evalue=3e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003399 [H]

Pfam domain/function: PF02470 MCE [H]

EC number: NA

Molecular weight: Translated: 18908; Mature: 18908

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTALDFWVGLFVVVGFLAVLFLALKVGNMSSLSFQPTYSVKMKFDNIGGLKPRAAVKS
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCEEEEEEECCCCCCCCHHHHHH
AGVVVGRVKTIGFDTNTYQALVTIDVDGQYQFPKDSSAKILTSGLLGEQYIGLDPGGDTE
CCEEEEEEEEEECCCCCEEEEEEEEECCCEECCCCCCCCEEHHCCCCCCEECCCCCCCCC
MLKTGDTITMTQSAIVLENLIGQFLYSKAADAGGAKPAAGAPAAPAPVAVPASAVSAASG
EEECCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCC
SAAQ
CCCC
>Mature Secondary Structure
MKKTALDFWVGLFVVVGFLAVLFLALKVGNMSSLSFQPTYSVKMKFDNIGGLKPRAAVKS
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCEEEEEEECCCCCCCCHHHHHH
AGVVVGRVKTIGFDTNTYQALVTIDVDGQYQFPKDSSAKILTSGLLGEQYIGLDPGGDTE
CCEEEEEEEEEECCCCCEEEEEEEEECCCEECCCCCCCCEEHHCCCCCCEECCCCCCCCC
MLKTGDTITMTQSAIVLENLIGQFLYSKAADAGGAKPAAGAPAAPAPVAVPASAVSAASG
EEECCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCC
SAAQ
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]