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The map label for this gene is ydeR [H]

Identifier: 78064885

GI number: 78064885

Start: 265954

End: 267249

Strand: Reverse

Name: ydeR [H]

Synonym: Bcep18194_A3408

Alternate gene names: 78064885

Gene position: 267249-265954 (Counterclockwise)

Preceding gene: 78064887

Following gene: 78064882

Centisome position: 7.23

GC content: 75.23

Gene sequence:

>1296_bases
ATGAACTGCCCTGCCAACCCTTGCCCCGCCGCCGCTCGCCCGCCCGTCAGCGCGCCCGCCGGCCCGCCGCCCGCGCTCAG
CGCGGGCATGACGCTGTTCTTCGCCGCGACGGTCGGCGTGATCGTGATGGACCTGTTCGCCGCGCAGCCGCTGACGGGCC
CGATCAGCACCGACCTGCACCTGCCGCCCGGCCTGACCGGCCTCGTCGCGATGCTGCCGCAGCTCGGCTACGCCGCCGGG
CTCGTGCTGCTCGTCCCGCTCGTCGACCTGCTCGAGAACCGTCGCCTGATCGTCACGACGCTGGCCGCGTGCGCAGCCGC
GCTCGCACTGCCGGCGTTCACGCGGTCGGGCACCGTATTCCTGCTGGCGACGCTCGTGGCCGGCGCCGCGTCGAGCGTGA
TCCAGATGCTCGTGCCGATGGCCGCGTCGATGGCGCCCGAGGCGCAGCGCGGCCGCGCGGTCGGCAACGTGATGAGCGGG
CTGATGCTCGGCATCCTGCTGTCCCGGCCGCTCGCGAGCCTGATCGCGGGCTCGGCCGGCTGGCGCGGGTTCTACGTGCT
GGCCGCGCTCGCGAACGCCGCAATCGCCGTCGTGCTCGCGCTGCGCCTGCCGTCGCGCACGCCGTCGATCACGGCCGGCT
ACCGCACGCTGCTCGCGTCGATGGGACGCCTGCTGGCCGACGAGCCGATACTGCGCCGGCATGCGTTGTCGGCCGCGCTG
GCGATGGCCGCGTTCAGCGCATTCTGGACCGCGGTCGGGCTGCGGCTCGCGCAGCCGCCGTTCGGCCTCGACCTGCACGG
CATTGCGCTGTTCGCGTTCGCCGGCGCCAGCGGTGCAATCGTCACGCCGCTCGCGGGCCGCGCCGGCGACCGCGGCCACG
GCCCGGTCGCGCAGCGGATCGCGCACGGCACGATGCTCGTGGCGCTCGTCGTGCTCGGGATCGCGGGTGCCGGCTGGTTC
GGCTTCGACGCGCACATGCATCGCGGCCCCGCGCTCGCGCTGCTGGCCGGCGGCGCGGCGCTGCTCGATGCGGGCGTCAT
CGTCGACCAGACGATCGGCCGCCGCGAGATCAACCTGCTGAACCCGGCCGCGCGCGGCCGCCTGAACGGGCTGTTCGTCG
GGCTGTTCTTCATCGGCGGCGCGCTCGGCGCGGTGCTCGCCGGCACCGCGTGGGCCTGGGGCGGGTGGAGTGCGGTATGC
GGTGTGGGGTTTGCGTTCGCCGGCGCGGCCACCGTCTTCGGGCTCACGGCCGGACGCGGGGCCGGCGCTGCCGCGTTGAC
GCGCCCGCGTGCCTAG

Upstream 100 bases:

>100_bases
CAAAACAAACTCGCATAATCATGTTAGAGATATTTCAATTGTCGCATAAACATCAGGCACCTACGATGGGTACTCCTTCG
ACCCATTCGCCAGGCTTCCG

Downstream 100 bases:

>100_bases
GCCGGCGTGACGCAGGCCCGAAAAGCCGAACGCCCCGCCCTCTTACGAGGGACGGGGCGTTCGGCGCACCGGGGTCAGTG
CGAAATCAGTGACGGACCAG

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 431; Mature: 431

Protein sequence:

>431_residues
MNCPANPCPAAARPPVSAPAGPPPALSAGMTLFFAATVGVIVMDLFAAQPLTGPISTDLHLPPGLTGLVAMLPQLGYAAG
LVLLVPLVDLLENRRLIVTTLAACAAALALPAFTRSGTVFLLATLVAGAASSVIQMLVPMAASMAPEAQRGRAVGNVMSG
LMLGILLSRPLASLIAGSAGWRGFYVLAALANAAIAVVLALRLPSRTPSITAGYRTLLASMGRLLADEPILRRHALSAAL
AMAAFSAFWTAVGLRLAQPPFGLDLHGIALFAFAGASGAIVTPLAGRAGDRGHGPVAQRIAHGTMLVALVVLGIAGAGWF
GFDAHMHRGPALALLAGGAALLDAGVIVDQTIGRREINLLNPAARGRLNGLFVGLFFIGGALGAVLAGTAWAWGGWSAVC
GVGFAFAGAATVFGLTAGRGAGAAALTRPRA

Sequences:

>Translated_431_residues
MNCPANPCPAAARPPVSAPAGPPPALSAGMTLFFAATVGVIVMDLFAAQPLTGPISTDLHLPPGLTGLVAMLPQLGYAAG
LVLLVPLVDLLENRRLIVTTLAACAAALALPAFTRSGTVFLLATLVAGAASSVIQMLVPMAASMAPEAQRGRAVGNVMSG
LMLGILLSRPLASLIAGSAGWRGFYVLAALANAAIAVVLALRLPSRTPSITAGYRTLLASMGRLLADEPILRRHALSAAL
AMAAFSAFWTAVGLRLAQPPFGLDLHGIALFAFAGASGAIVTPLAGRAGDRGHGPVAQRIAHGTMLVALVVLGIAGAGWF
GFDAHMHRGPALALLAGGAALLDAGVIVDQTIGRREINLLNPAARGRLNGLFVGLFFIGGALGAVLAGTAWAWGGWSAVC
GVGFAFAGAATVFGLTAGRGAGAAALTRPRA
>Mature_431_residues
MNCPANPCPAAARPPVSAPAGPPPALSAGMTLFFAATVGVIVMDLFAAQPLTGPISTDLHLPPGLTGLVAMLPQLGYAAG
LVLLVPLVDLLENRRLIVTTLAACAAALALPAFTRSGTVFLLATLVAGAASSVIQMLVPMAASMAPEAQRGRAVGNVMSG
LMLGILLSRPLASLIAGSAGWRGFYVLAALANAAIAVVLALRLPSRTPSITAGYRTLLASMGRLLADEPILRRHALSAAL
AMAAFSAFWTAVGLRLAQPPFGLDLHGIALFAFAGASGAIVTPLAGRAGDRGHGPVAQRIAHGTMLVALVVLGIAGAGWF
GFDAHMHRGPALALLAGGAALLDAGVIVDQTIGRREINLLNPAARGRLNGLFVGLFFIGGALGAVLAGTAWAWGGWSAVC
GVGFAFAGAATVFGLTAGRGAGAAALTRPRA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 43260; Mature: 43260

Theoretical pI: Translated: 11.88; Mature: 11.88

Prosite motif: PS00136 SUBTILASE_ASP ; PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNCPANPCPAAARPPVSAPAGPPPALSAGMTLFFAATVGVIVMDLFAAQPLTGPISTDLH
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
LPPGLTGLVAMLPQLGYAAGLVLLVPLVDLLENRRLIVTTLAACAAALALPAFTRSGTVF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHH
LLATLVAGAASSVIQMLVPMAASMAPEAQRGRAVGNVMSGLMLGILLSRPLASLIAGSAG
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
WRGFYVLAALANAAIAVVLALRLPSRTPSITAGYRTLLASMGRLLADEPILRRHALSAAL
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
AMAAFSAFWTAVGLRLAQPPFGLDLHGIALFAFAGASGAIVTPLAGRAGDRGHGPVAQRI
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEECCCCCCCCCCCCCHHHHHH
AHGTMLVALVVLGIAGAGWFGFDAHMHRGPALALLAGGAALLDAGVIVDQTIGRREINLL
HHHHHHHHHHHHHHHCCCCCCCHHHHCCCCEEEEECCCHHHHHCCHHHHCCCCCCHHCCC
NPAARGRLNGLFVGLFFIGGALGAVLAGTAWAWGGWSAVCGVGFAFAGAATVFGLTAGRG
CHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
AGAAALTRPRA
CCCCCCCCCCC
>Mature Secondary Structure
MNCPANPCPAAARPPVSAPAGPPPALSAGMTLFFAATVGVIVMDLFAAQPLTGPISTDLH
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
LPPGLTGLVAMLPQLGYAAGLVLLVPLVDLLENRRLIVTTLAACAAALALPAFTRSGTVF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHH
LLATLVAGAASSVIQMLVPMAASMAPEAQRGRAVGNVMSGLMLGILLSRPLASLIAGSAG
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
WRGFYVLAALANAAIAVVLALRLPSRTPSITAGYRTLLASMGRLLADEPILRRHALSAAL
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
AMAAFSAFWTAVGLRLAQPPFGLDLHGIALFAFAGASGAIVTPLAGRAGDRGHGPVAQRI
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEECCCCCCCCCCCCCHHHHHH
AHGTMLVALVVLGIAGAGWFGFDAHMHRGPALALLAGGAALLDAGVIVDQTIGRREINLL
HHHHHHHHHHHHHHHCCCCCCCHHHHCCCCEEEEECCCHHHHHCCHHHHCCCCCCHHCCC
NPAARGRLNGLFVGLFFIGGALGAVLAGTAWAWGGWSAVCGVGFAFAGAATVFGLTAGRG
CHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
AGAAALTRPRA
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]