| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
Click here to switch to the map view.
The map label for this gene is 78064882
Identifier: 78064882
GI number: 78064882
Start: 263420
End: 264184
Strand: Reverse
Name: 78064882
Synonym: Bcep18194_A3405
Alternate gene names: NA
Gene position: 264184-263420 (Counterclockwise)
Preceding gene: 78064885
Following gene: 78064880
Centisome position: 7.15
GC content: 73.99
Gene sequence:
>765_bases ATGGCGACCGCGACCTTCCGCTTCCACGACGAACTGAACGCCTTTCTCCCGCGCGCCCAGCGCGACCGCGCGTTCGGGCA TGCGTGTGCGCGTGACGCGACGCTGAAGCACGCGATCGAGGCGCTCGGCGTCCCGCATACCGAAATCGGCCGGCTGTGCG TGAACGACGCGCCGGCCACGCTCGACCGGCCGCTCGACGACGGCGACCGGGTCGAAGCCTTTCCGGAACGCGCGCAGCCG GCGGCGAACGGAGCCACCGTGCCGCCATCGGCGCATTGGCGCTTCGCTGCCGACGCGCATCTCGGCGGCCTCGCGCAGCT GCTGCGCCTCGCGGGTTTCGACACCTGCTACGACAACCACTACCGTGACGACGAACTCGCGGCGCTCGCCGCGCGAGAGG GCCGGATCGTGCTGACCCGTGACCGCGAGCTGCTCAAGCGGCGCGCGGTCGAGCGCGGCTGCTACCTGCACGCGCTGCAG CCGGCCGACCAGCTGCGCGAACTGTTCGAGCGGCTCGATCTCGCTCCGCACATGCGGCCGTTCCGGCTGTGCCTGCGCTG CAATGCGCCGCTGCATCCGCTCGACGCGGCCGCGGCCGCGCCACGCGTGCCGGCCGGCGTCCGGCTGCGGCACCGGCGCT TCGCCGCGTGCGACGTGTGCCGGCGCGTGTTCTGGGAAGGCTCGCACTGGCGGCGCATGCGCACGGTGGTCGACGCGATG CGCGCGCCGCCGCCGCCAGCGCCGGCCGGCGAACGCGAGGCCTGA
Upstream 100 bases:
>100_bases CCATTTCCCGCTCCTTCGCTCCGTGAAGCGGGGAGTTAACCACAGATGCGTGGCGTCTGCAGGGCACGCGGCCGGCCATG CGCGGTGCCATACTGCCCGC
Downstream 100 bases:
>100_bases AAAAAACAAAACCCCGCATGCGTGAACATGCGGGGTTTCGCGACTGGCGGCCGGCGGTGCCGGCCCCGGGCGAAGCGCTT AGTTTGCTGCGCCTGCGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 254; Mature: 253
Protein sequence:
>254_residues MATATFRFHDELNAFLPRAQRDRAFGHACARDATLKHAIEALGVPHTEIGRLCVNDAPATLDRPLDDGDRVEAFPERAQP AANGATVPPSAHWRFAADAHLGGLAQLLRLAGFDTCYDNHYRDDELAALAAREGRIVLTRDRELLKRRAVERGCYLHALQ PADQLRELFERLDLAPHMRPFRLCLRCNAPLHPLDAAAAAPRVPAGVRLRHRRFAACDVCRRVFWEGSHWRRMRTVVDAM RAPPPPAPAGEREA
Sequences:
>Translated_254_residues MATATFRFHDELNAFLPRAQRDRAFGHACARDATLKHAIEALGVPHTEIGRLCVNDAPATLDRPLDDGDRVEAFPERAQP AANGATVPPSAHWRFAADAHLGGLAQLLRLAGFDTCYDNHYRDDELAALAAREGRIVLTRDRELLKRRAVERGCYLHALQ PADQLRELFERLDLAPHMRPFRLCLRCNAPLHPLDAAAAAPRVPAGVRLRHRRFAACDVCRRVFWEGSHWRRMRTVVDAM RAPPPPAPAGEREA >Mature_253_residues ATATFRFHDELNAFLPRAQRDRAFGHACARDATLKHAIEALGVPHTEIGRLCVNDAPATLDRPLDDGDRVEAFPERAQPA ANGATVPPSAHWRFAADAHLGGLAQLLRLAGFDTCYDNHYRDDELAALAAREGRIVLTRDRELLKRRAVERGCYLHALQP ADQLRELFERLDLAPHMRPFRLCLRCNAPLHPLDAAAAAPRVPAGVRLRHRRFAACDVCRRVFWEGSHWRRMRTVVDAMR APPPPAPAGEREA
Specific function: Unknown
COG id: COG1656
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28430; Mature: 28299
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATATFRFHDELNAFLPRAQRDRAFGHACARDATLKHAIEALGVPHTEIGRLCVNDAPAT CCCCEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCH LDRPLDDGDRVEAFPERAQPAANGATVPPSAHWRFAADAHLGGLAQLLRLAGFDTCYDNH HCCCCCCCCHHHHCHHHCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCHHHCCC YRDDELAALAAREGRIVLTRDRELLKRRAVERGCYLHALQPADQLRELFERLDLAPHMRP CCCHHHHHHHHCCCCEEEECCHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHCCCCCCCH FRLCLRCNAPLHPLDAAAAAPRVPAGVRLRHRRFAACDVCRRVFWEGSHWRRMRTVVDAM HHHHHHCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH RAPPPPAPAGEREA HCCCCCCCCCCCCC >Mature Secondary Structure ATATFRFHDELNAFLPRAQRDRAFGHACARDATLKHAIEALGVPHTEIGRLCVNDAPAT CCCEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCH LDRPLDDGDRVEAFPERAQPAANGATVPPSAHWRFAADAHLGGLAQLLRLAGFDTCYDNH HCCCCCCCCHHHHCHHHCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCHHHCCC YRDDELAALAAREGRIVLTRDRELLKRRAVERGCYLHALQPADQLRELFERLDLAPHMRP CCCHHHHHHHHCCCCEEEECCHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHCCCCCCCH FRLCLRCNAPLHPLDAAAAAPRVPAGVRLRHRRFAACDVCRRVFWEGSHWRRMRTVVDAM HHHHHHCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH RAPPPPAPAGEREA HCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA