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The map label for this gene is ompW [H]

Identifier: 78064887

GI number: 78064887

Start: 268461

End: 269294

Strand: Reverse

Name: ompW [H]

Synonym: Bcep18194_A3410

Alternate gene names: 78064887

Gene position: 269294-268461 (Counterclockwise)

Preceding gene: 78064888

Following gene: 78064885

Centisome position: 7.29

GC content: 66.91

Gene sequence:

>834_bases
ATGAAGAAAACCCTTCTCTGCGCGGCGGCCGGCGCCGCCGTGCTGGCGCCGCTCGCGGCGCACGCGCAGAGCGCCGGCAG
CAACGTCGTCACGCTGGGCTGGTTCCACGTGATGCCGCAGCAGAGCAGCACGCCGATGACGACCAACGTCGCGCCGACGC
CGATCAACACGCCGCTGCGGCTGCCGCCATCGTTCACGTCGCCGGGCACCGGGCTGCGCACGAGCGGCGCCGATACCGTC
GGCCTGACGGTCAGCCACTTCCTGACCGACCACATCGCGGTGACATCGGTGGCCGGCGTGCCGCCGGTGTTCAAGGTGTC
GGGCCAGGGCACGATCAAGCCGCCAGGACCTGCCGGCGCGCTCGGCACGCAGAACATCGGGCTGGCGTCGGTCAACCCGA
TCGTGAAGAGCGTGCGGCAATGGAGCCCGGCGGTGCTGCTGCAGTACTACTTCGGGCAGGCTACCGCGAAGTTCCGGCCG
TTCCTCGGCCTCGGCGTGTCGTACAACTGGTTCAGCGACCTGCAGCTCAACACGAACTTCATCAAGCAGACGCAGGACAA
CCTCGGCGCGATTCTCGCGGCGGGCGCGGGCAAGCCGGGTACGACATCGGTGGAGGCAAAGGCGTCGTCGTCATGGCAGC
CGGTGTTCAACGCGGGCCTGCAGTACAACATGACCGAGCACTTCGGGCTGATCGCGTCGGTCACGTACATCCCGCTGAAG
ACGACGTCGACGGTGACGATCAAGGCAGCCGACGGCACGGTGCTCTCGGAGTCGAAATCGGACCTGAAGGCCGACCCGAT
CATCAGCTACGTCGGGATGACGTACAAGTTCTGA

Upstream 100 bases:

>100_bases
CATCTTCACGGGTGGCGTGTTCGGTTTCCTCGACAACGCCGGATCGACGCCGTATTTCACGATCGGCGCATTCGTCCAGT
AAGCGGAGGGGGAAGCCGTG

Downstream 100 bases:

>100_bases
GCGCGGCGACGGAAGGCGAATGGAACGCTGCGACAAAATCGCAGGCAAAAAAAAGCCCGCCTAAGAGGCGGGCTGAATCC
ATATCAGAGGAGACATGGAG

Product: OmpW family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MKKTLLCAAAGAAVLAPLAAHAQSAGSNVVTLGWFHVMPQQSSTPMTTNVAPTPINTPLRLPPSFTSPGTGLRTSGADTV
GLTVSHFLTDHIAVTSVAGVPPVFKVSGQGTIKPPGPAGALGTQNIGLASVNPIVKSVRQWSPAVLLQYYFGQATAKFRP
FLGLGVSYNWFSDLQLNTNFIKQTQDNLGAILAAGAGKPGTTSVEAKASSSWQPVFNAGLQYNMTEHFGLIASVTYIPLK
TTSTVTIKAADGTVLSESKSDLKADPIISYVGMTYKF

Sequences:

>Translated_277_residues
MKKTLLCAAAGAAVLAPLAAHAQSAGSNVVTLGWFHVMPQQSSTPMTTNVAPTPINTPLRLPPSFTSPGTGLRTSGADTV
GLTVSHFLTDHIAVTSVAGVPPVFKVSGQGTIKPPGPAGALGTQNIGLASVNPIVKSVRQWSPAVLLQYYFGQATAKFRP
FLGLGVSYNWFSDLQLNTNFIKQTQDNLGAILAAGAGKPGTTSVEAKASSSWQPVFNAGLQYNMTEHFGLIASVTYIPLK
TTSTVTIKAADGTVLSESKSDLKADPIISYVGMTYKF
>Mature_277_residues
MKKTLLCAAAGAAVLAPLAAHAQSAGSNVVTLGWFHVMPQQSSTPMTTNVAPTPINTPLRLPPSFTSPGTGLRTSGADTV
GLTVSHFLTDHIAVTSVAGVPPVFKVSGQGTIKPPGPAGALGTQNIGLASVNPIVKSVRQWSPAVLLQYYFGQATAKFRP
FLGLGVSYNWFSDLQLNTNFIKQTQDNLGAILAAGAGKPGTTSVEAKASSSWQPVFNAGLQYNMTEHFGLIASVTYIPLK
TTSTVTIKAADGTVLSESKSDLKADPIISYVGMTYKF

Specific function: Acts As A Receptor For Colicin S4. [C]

COG id: COG3047

COG function: function code M; Outer membrane protein W

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OmpW/AlkL family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR005618 [H]

Pfam domain/function: PF03922 OmpW [H]

EC number: NA

Molecular weight: Translated: 28894; Mature: 28894

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTLLCAAAGAAVLAPLAAHAQSAGSNVVTLGWFHVMPQQSSTPMTTNVAPTPINTPLR
CCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCEECCCCCCCCCCCCC
LPPSFTSPGTGLRTSGADTVGLTVSHFLTDHIAVTSVAGVPPVFKVSGQGTIKPPGPAGA
CCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCC
LGTQNIGLASVNPIVKSVRQWSPAVLLQYYFGQATAKFRPFLGLGVSYNWFSDLQLNTNF
CCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCEEECHHH
IKQTQDNLGAILAAGAGKPGTTSVEAKASSSWQPVFNAGLQYNMTEHFGLIASVTYIPLK
HHHHHHCCCEEEEECCCCCCCCEEEECCCCCCCHHHHCCEEECCHHHHCEEEEEEEEEEE
TTSTVTIKAADGTVLSESKSDLKADPIISYVGMTYKF
CCCEEEEEECCCCEECCCCCCCCCCHHHHECCCEECC
>Mature Secondary Structure
MKKTLLCAAAGAAVLAPLAAHAQSAGSNVVTLGWFHVMPQQSSTPMTTNVAPTPINTPLR
CCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCEECCCCCCCCCCCCC
LPPSFTSPGTGLRTSGADTVGLTVSHFLTDHIAVTSVAGVPPVFKVSGQGTIKPPGPAGA
CCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCC
LGTQNIGLASVNPIVKSVRQWSPAVLLQYYFGQATAKFRPFLGLGVSYNWFSDLQLNTNF
CCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCEEECHHH
IKQTQDNLGAILAAGAGKPGTTSVEAKASSSWQPVFNAGLQYNMTEHFGLIASVTYIPLK
HHHHHHCCCEEEEECCCCCCCCEEEECCCCCCCHHHHCCEEECCHHHHCEEEEEEEEEEE
TTSTVTIKAADGTVLSESKSDLKADPIISYVGMTYKF
CCCEEEEEECCCCEECCCCCCCCCCHHHHECCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2336399; 10952301 [H]