| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is glxK [H]
Identifier: 78050028
GI number: 78050028
Start: 5158057
End: 5159226
Strand: Reverse
Name: glxK [H]
Synonym: XCV4472
Alternate gene names: 78050028
Gene position: 5159226-5158057 (Counterclockwise)
Preceding gene: 78050029
Following gene: 78050027
Centisome position: 99.63
GC content: 73.33
Gene sequence:
>1170_bases ATGAAGATCGTCATTGCCCCCGATTCGTACAAGGAAAGCCTGCCCGCGCTGGAGGTGGCCACGCAGATCGAGGCGGGCTT TCGCGAGGTCTTCCCCGACTGGCAGTACCACAAGGTGCCGGTTGCCGATGGCGGCGAAGGCACGGTCGATGCGCTGGTGG CCGCCACCGGCGGGCGGGTGATCGCCTGCACCGTCAGCGGCCCGCTCGGCACCCCGGTGCAGGCGTTCTTCGGCCTGACC GGCGACGGCCGCACCGCGGTGATCGAAATGGCCGCCGCCAGCGGCCTGGCCCTGCTGCCGCCGGCCGCGCGCGCGCCGCT GCGCACCAGCACCGCAGGCGTGGGTGAGCTGATCCTGGCCGCCCTGGACGCCGGCGCACGGCGTTTCATCATCGGCATCG GCGGCAGCGCCACCAACGACGGCGGCAGCGGCCTGGCGCAGGCCTTGGGCGTGCGGTTGCTGGATGGCCAGGGCGAGGCG ATCGGTCCAGGCGGCGGCGCGCTGGCCACGCTGGCGCGCATCGACACCGAAGGCATGGATGTGCGGCTGCAGGATTGCCA GTTCGAAGTGGCCTGCGACGTGGACAACCCGCTGATCGGGCCGACCGGCGCCTCGGCGGTGTTCGGCCCGCAGAAGGGCG CCACCCCCGGCATGGTGCGCCAGCTCGATCGCAACCTGCAGCACTACGCCGACCTGTTGCAGCGCGACCTGGGTGTGCGG TTGCACGCGCTGCCCGGCGGCGGCGCGGCCGGCGGCCTGGGCGCGGCCCTGGTGGCGTATCTGGGCGCGCAGCTGCGGCC CGGGGTGGAGATCGTCGCCCAGGCGCTCGGGCTGGACGCGCTGGTCGCCCAGGCCGATCTGGTCATCACCGGCGAAGGCC GCCTGGACAGCCAGAGCCTGCACGGCAAGACCCCGGTGGGCGTGGCGCGGGTGGCGCAACGACACAGCAAGCCGGTGATC GCCATCGCCGGTTGCCTGGGCAACGGCGCCGCGCTGCTGCATGGGCACGGCATCGACGCGATGTTTGCGGTGGTGCATCG CGCCTGCACGGTGGAGCAGGCGCTGGCCGAAGCCGCCAGCAACGTGCGCATCGCCGCCCGCAATGTGGCCGCGGCGCTGC AGCTGGGCGGGGCATTGGCACAGGTCGGGTCGGGGCGCGAGCGGGGCTGA
Upstream 100 bases:
>100_bases TACGTGCTGGCCGGCGCCATGGCGCTGGGCGCCGCGCTGGTGCTGCGGGTGCCGGCGCGGGCGGTGAACCGGTGATGCGT CCGTCCCAGCGAGTGTCCGC
Downstream 100 bases:
>100_bases CGGCAGTGCCCGGGTGGCTCGGAGGGGTGGGGCACCTGCGCTTGCGTTCGGGGCGGCCTCCTGGACAGGGTGCGCGCCCA CTGCATGTACGGCCGATCCG
Product: glycerate kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 389; Mature: 389
Protein sequence:
>389_residues MKIVIAPDSYKESLPALEVATQIEAGFREVFPDWQYHKVPVADGGEGTVDALVAATGGRVIACTVSGPLGTPVQAFFGLT GDGRTAVIEMAAASGLALLPPAARAPLRTSTAGVGELILAALDAGARRFIIGIGGSATNDGGSGLAQALGVRLLDGQGEA IGPGGGALATLARIDTEGMDVRLQDCQFEVACDVDNPLIGPTGASAVFGPQKGATPGMVRQLDRNLQHYADLLQRDLGVR LHALPGGGAAGGLGAALVAYLGAQLRPGVEIVAQALGLDALVAQADLVITGEGRLDSQSLHGKTPVGVARVAQRHSKPVI AIAGCLGNGAALLHGHGIDAMFAVVHRACTVEQALAEAASNVRIAARNVAAALQLGGALAQVGSGRERG
Sequences:
>Translated_389_residues MKIVIAPDSYKESLPALEVATQIEAGFREVFPDWQYHKVPVADGGEGTVDALVAATGGRVIACTVSGPLGTPVQAFFGLT GDGRTAVIEMAAASGLALLPPAARAPLRTSTAGVGELILAALDAGARRFIIGIGGSATNDGGSGLAQALGVRLLDGQGEA IGPGGGALATLARIDTEGMDVRLQDCQFEVACDVDNPLIGPTGASAVFGPQKGATPGMVRQLDRNLQHYADLLQRDLGVR LHALPGGGAAGGLGAALVAYLGAQLRPGVEIVAQALGLDALVAQADLVITGEGRLDSQSLHGKTPVGVARVAQRHSKPVI AIAGCLGNGAALLHGHGIDAMFAVVHRACTVEQALAEAASNVRIAARNVAAALQLGGALAQVGSGRERG >Mature_389_residues MKIVIAPDSYKESLPALEVATQIEAGFREVFPDWQYHKVPVADGGEGTVDALVAATGGRVIACTVSGPLGTPVQAFFGLT GDGRTAVIEMAAASGLALLPPAARAPLRTSTAGVGELILAALDAGARRFIIGIGGSATNDGGSGLAQALGVRLLDGQGEA IGPGGGALATLARIDTEGMDVRLQDCQFEVACDVDNPLIGPTGASAVFGPQKGATPGMVRQLDRNLQHYADLLQRDLGVR LHALPGGGAAGGLGAALVAYLGAQLRPGVEIVAQALGLDALVAQADLVITGEGRLDSQSLHGKTPVGVARVAQRHSKPVI AIAGCLGNGAALLHGHGIDAMFAVVHRACTVEQALAEAASNVRIAARNVAAALQLGGALAQVGSGRERG
Specific function: Unknown
COG id: COG1929
COG function: function code G; Glycerate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycerate kinase type-1 family [H]
Homologues:
Organism=Escherichia coli, GI145693185, Length=376, Percent_Identity=58.5106382978723, Blast_Score=412, Evalue=1e-116, Organism=Escherichia coli, GI1786724, Length=376, Percent_Identity=55.5851063829787, Blast_Score=384, Evalue=1e-108,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018193 - InterPro: IPR004381 [H]
Pfam domain/function: PF02595 Gly_kinase [H]
EC number: =2.7.1.31 [H]
Molecular weight: Translated: 39079; Mature: 39079
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIVIAPDSYKESLPALEVATQIEAGFREVFPDWQYHKVPVADGGEGTVDALVAATGGRV CEEEECCCCHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHEEECCCEE IACTVSGPLGTPVQAFFGLTGDGRTAVIEMAAASGLALLPPAARAPLRTSTAGVGELILA EEEEECCCCCCCHHHHHCCCCCCCEEEEEEHHCCCEEECCCCCCCCCCCCCCCHHHHHHH ALDAGARRFIIGIGGSATNDGGSGLAQALGVRLLDGQGEAIGPGGGALATLARIDTEGMD HHCCCCEEEEEECCCCCCCCCCHHHHHHHCEEEECCCCCEECCCCHHHHHHHHCCCCCCE VRLQDCQFEVACDVDNPLIGPTGASAVFGPQKGATPGMVRQLDRNLQHYADLLQRDLGVR EEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCE LHALPGGGAAGGLGAALVAYLGAQLRPGVEIVAQALGLDALVAQADLVITGEGRLDSQSL EEECCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCHHHHHCCCCEEEECCCCCCCCCC HGKTPVGVARVAQRHSKPVIAIAGCLGNGAALLHGHGIDAMFAVVHRACTVEQALAEAAS CCCCCHHHHHHHHHCCCCEEEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHC NVRIAARNVAAALQLGGALAQVGSGRERG CCEEEHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKIVIAPDSYKESLPALEVATQIEAGFREVFPDWQYHKVPVADGGEGTVDALVAATGGRV CEEEECCCCHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHEEECCCEE IACTVSGPLGTPVQAFFGLTGDGRTAVIEMAAASGLALLPPAARAPLRTSTAGVGELILA EEEEECCCCCCCHHHHHCCCCCCCEEEEEEHHCCCEEECCCCCCCCCCCCCCCHHHHHHH ALDAGARRFIIGIGGSATNDGGSGLAQALGVRLLDGQGEAIGPGGGALATLARIDTEGMD HHCCCCEEEEEECCCCCCCCCCHHHHHHHCEEEECCCCCEECCCCHHHHHHHHCCCCCCE VRLQDCQFEVACDVDNPLIGPTGASAVFGPQKGATPGMVRQLDRNLQHYADLLQRDLGVR EEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCE LHALPGGGAAGGLGAALVAYLGAQLRPGVEIVAQALGLDALVAQADLVITGEGRLDSQSL EEECCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCHHHHHCCCCEEEECCCCCCCCCC HGKTPVGVARVAQRHSKPVIAIAGCLGNGAALLHGHGIDAMFAVVHRACTVEQALAEAAS CCCCCHHHHHHHHHCCCCEEEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHC NVRIAARNVAAALQLGGALAQVGSGRERG CCEEEHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7584049; 9384377; 3020045 [H]