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The map label for this gene is 78049865

Identifier: 78049865

GI number: 78049865

Start: 4950171

End: 4951778

Strand: Reverse

Name: 78049865

Synonym: XCV4309

Alternate gene names: NA

Gene position: 4951778-4950171 (Counterclockwise)

Preceding gene: 78049866

Following gene: 78049862

Centisome position: 95.62

GC content: 66.17

Gene sequence:

>1608_bases
ATGTCCAGGTCGGCGGGCGCGCTGCACTGGCAGGCCGCCCAGGCCGCGTTGGCGCGGCGCGACCTGGGCGTGGCAGCGTC
TGCATTGCAGGCGCTGCTGGAGGTGGAACCGACGCATGTGGCTGCACGCGTGCTGCTGGCCGGCACCGTGTTGGCCAACG
GCCGCATGCGCGAGGCCGTGACGCAACTCCAGCTGGCCGCTCGCGATGTGGGCGACGATGTGGCGATGCGTTGCCGTGTG
GCGCAGGCCTTGTTGCGCGTGGGCGAACATCGCGTGCTGCACGCGCTGCTACGGCATCCCTCGGTGATGCAGTGCCGCGA
CGACGCGACCTTGGCTTTGCTTGCACACGTGCACCAATCCTTGGGCGAACACGTCGAGGCACTGGCGATGATGCAGCGCG
CACAGGCGTGCGGATTCGATGGTCCGGACTTCCGTTTTTTTCTTGCGGTGCAACTGCAGTTCAATGGGCGCCTGGATGAG
GCGGCGCAGGCCTTGGAGCAGACCCTGGCGCTGTCGCCCGGCTACGGCCGTGCAGCGCTCGCGCGTGCGCGGCTGCGCCG
TCAGACCACCGGCAGCAACCATGTCGCGCAATTACGTCAGCAATTGCAGCTCGCCAAACCCGATAGTGAAGATCGTGCCG
GGCTGGCCTTCGCGTTGTACAAGGAGCTGGAGGACCTGGGCGACACCGCTGCCGCCTGGGATGCGCTGCAGCACGGCAAT
GCAGTGATGCATGCACGTCTGCGCCACGATGCCGATGCCGATGCCGATGCCGATGCCGAGGCAGCGCTGTACGCGCAACT
GGGTGACCTGGCTGCGCGGGGCGTGTTCGCAGCGCAAGGCACCGGTGCCGTACAAGGTCCGCAGCCGATCTTCGTGCTCG
GCCTGCCGCGCTCGGGCACCACGGTGCTGGAGCGCATGCTGGGCAATCATTCGCAGGTCGTTTCGGCCGGCGAATTGAAC
GACTTCGGTCATCAGTTGCGTTGGGGCGCCGATCAGGCCGGGCGCAGTCTGCTGGACGCGCCGCTGTTGCAGGCGCTGCC
CTCGCTGGATTATGCGCAGATTGGCGCGCGGTATCTGCAACAAACGCAGTGGCGTGCCGGATCGGCGCGCTGGTATATCG
ATAAATTGCCGGCCAATGCGGTGGCGATCGGCGCGATTGCGCGCGCACTGCCGGGTGCACTGATCGTGCACCTGGTGCGC
GAGCCGATGGCGGTATGTTTTTCCAATTACCGCGCGCTGTTCGGCGATTCGTATGCCTACAGTTACGACCTGCACACACT
GGCGCGTCACTATCGGGCGTATCACGGCTTGATGGCGCAATGGCGCGCTGCCTTGCCGGGGCGGGTGATCGATGTGGACT
ACGCGCAGATGGTGCGCGATCCATCCACGGTGCTGCAGCAGTTGATGGCACATTGCGGGCTGGACATCGAGCCGGGGCAG
ATCGACATCACGCGCAATGCCGCAGCGTCGGCCACGCTGAGCAGCGTGCAGGTGCGCGAGGGCGTGCACAGCCGCAACGT
GGAGGAATGGCGCCGCTATGCAGTCCAGCTGGAGCCTTTGCGGCAGGCGTTGTGGCAGGCGGGTCTGATCGATGCTGGCG
TGCATTGA

Upstream 100 bases:

>100_bases
ATGCCGACGACCCGCAGCTGCGCGCCAACCGGCTCGCACTGCTGAAGAAGCTCGGCGACCGCCTCGGCAGCGTCGCCGCC
ATCGAGCACCTATCCAGCTG

Downstream 100 bases:

>100_bases
CAGCAGCCATTAGGTCTTGGGCGGCGCACTAGACGCGCTGCGAGCACGTTTCATCGGCCTCCAGTTCGATGCGCGCCGAA
GCAGTCGCCCCGATGGACAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 535; Mature: 534

Protein sequence:

>535_residues
MSRSAGALHWQAAQAALARRDLGVAASALQALLEVEPTHVAARVLLAGTVLANGRMREAVTQLQLAARDVGDDVAMRCRV
AQALLRVGEHRVLHALLRHPSVMQCRDDATLALLAHVHQSLGEHVEALAMMQRAQACGFDGPDFRFFLAVQLQFNGRLDE
AAQALEQTLALSPGYGRAALARARLRRQTTGSNHVAQLRQQLQLAKPDSEDRAGLAFALYKELEDLGDTAAAWDALQHGN
AVMHARLRHDADADADADAEAALYAQLGDLAARGVFAAQGTGAVQGPQPIFVLGLPRSGTTVLERMLGNHSQVVSAGELN
DFGHQLRWGADQAGRSLLDAPLLQALPSLDYAQIGARYLQQTQWRAGSARWYIDKLPANAVAIGAIARALPGALIVHLVR
EPMAVCFSNYRALFGDSYAYSYDLHTLARHYRAYHGLMAQWRAALPGRVIDVDYAQMVRDPSTVLQQLMAHCGLDIEPGQ
IDITRNAAASATLSSVQVREGVHSRNVEEWRRYAVQLEPLRQALWQAGLIDAGVH

Sequences:

>Translated_535_residues
MSRSAGALHWQAAQAALARRDLGVAASALQALLEVEPTHVAARVLLAGTVLANGRMREAVTQLQLAARDVGDDVAMRCRV
AQALLRVGEHRVLHALLRHPSVMQCRDDATLALLAHVHQSLGEHVEALAMMQRAQACGFDGPDFRFFLAVQLQFNGRLDE
AAQALEQTLALSPGYGRAALARARLRRQTTGSNHVAQLRQQLQLAKPDSEDRAGLAFALYKELEDLGDTAAAWDALQHGN
AVMHARLRHDADADADADAEAALYAQLGDLAARGVFAAQGTGAVQGPQPIFVLGLPRSGTTVLERMLGNHSQVVSAGELN
DFGHQLRWGADQAGRSLLDAPLLQALPSLDYAQIGARYLQQTQWRAGSARWYIDKLPANAVAIGAIARALPGALIVHLVR
EPMAVCFSNYRALFGDSYAYSYDLHTLARHYRAYHGLMAQWRAALPGRVIDVDYAQMVRDPSTVLQQLMAHCGLDIEPGQ
IDITRNAAASATLSSVQVREGVHSRNVEEWRRYAVQLEPLRQALWQAGLIDAGVH
>Mature_534_residues
SRSAGALHWQAAQAALARRDLGVAASALQALLEVEPTHVAARVLLAGTVLANGRMREAVTQLQLAARDVGDDVAMRCRVA
QALLRVGEHRVLHALLRHPSVMQCRDDATLALLAHVHQSLGEHVEALAMMQRAQACGFDGPDFRFFLAVQLQFNGRLDEA
AQALEQTLALSPGYGRAALARARLRRQTTGSNHVAQLRQQLQLAKPDSEDRAGLAFALYKELEDLGDTAAAWDALQHGNA
VMHARLRHDADADADADAEAALYAQLGDLAARGVFAAQGTGAVQGPQPIFVLGLPRSGTTVLERMLGNHSQVVSAGELND
FGHQLRWGADQAGRSLLDAPLLQALPSLDYAQIGARYLQQTQWRAGSARWYIDKLPANAVAIGAIARALPGALIVHLVRE
PMAVCFSNYRALFGDSYAYSYDLHTLARHYRAYHGLMAQWRAALPGRVIDVDYAQMVRDPSTVLQQLMAHCGLDIEPGQI
DITRNAAASATLSSVQVREGVHSRNVEEWRRYAVQLEPLRQALWQAGLIDAGVH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 8 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000863
- InterPro:   IPR001440
- InterPro:   IPR011717
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00685 Sulfotransfer_1; PF00515 TPR_1; PF07721 TPR_4 [H]

EC number: NA

Molecular weight: Translated: 58119; Mature: 57988

Theoretical pI: Translated: 7.23; Mature: 7.23

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRSAGALHWQAAQAALARRDLGVAASALQALLEVEPTHVAARVLLAGTVLANGRMREAV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHH
TQLQLAARDVGDDVAMRCRVAQALLRVGEHRVLHALLRHPSVMQCRDDATLALLAHVHQS
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHH
LGEHVEALAMMQRAQACGFDGPDFRFFLAVQLQFNGRLDEAAQALEQTLALSPGYGRAAL
HHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHCCCCCCHHHH
ARARLRRQTTGSNHVAQLRQQLQLAKPDSEDRAGLAFALYKELEDLGDTAAAWDALQHGN
HHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCC
AVMHARLRHDADADADADAEAALYAQLGDLAARGVFAAQGTGAVQGPQPIFVLGLPRSGT
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCEEEEECCCCCH
TVLERMLGNHSQVVSAGELNDFGHQLRWGADQAGRSLLDAPLLQALPSLDYAQIGARYLQ
HHHHHHHCCHHHEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
QTQWRAGSARWYIDKLPANAVAIGAIARALPGALIVHLVREPMAVCFSNYRALFGDSYAY
HHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
SYDLHTLARHYRAYHGLMAQWRAALPGRVIDVDYAQMVRDPSTVLQQLMAHCGLDIEPGQ
EHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHCCHHHHHHHHHHHCCCCCCCCE
IDITRNAAASATLSSVQVREGVHSRNVEEWRRYAVQLEPLRQALWQAGLIDAGVH
EEEECCCHHHHHHHHHHHHHCHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SRSAGALHWQAAQAALARRDLGVAASALQALLEVEPTHVAARVLLAGTVLANGRMREAV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHH
TQLQLAARDVGDDVAMRCRVAQALLRVGEHRVLHALLRHPSVMQCRDDATLALLAHVHQS
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHH
LGEHVEALAMMQRAQACGFDGPDFRFFLAVQLQFNGRLDEAAQALEQTLALSPGYGRAAL
HHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHCCCCCCHHHH
ARARLRRQTTGSNHVAQLRQQLQLAKPDSEDRAGLAFALYKELEDLGDTAAAWDALQHGN
HHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCC
AVMHARLRHDADADADADAEAALYAQLGDLAARGVFAAQGTGAVQGPQPIFVLGLPRSGT
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCEEEEECCCCCH
TVLERMLGNHSQVVSAGELNDFGHQLRWGADQAGRSLLDAPLLQALPSLDYAQIGARYLQ
HHHHHHHCCHHHEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
QTQWRAGSARWYIDKLPANAVAIGAIARALPGALIVHLVREPMAVCFSNYRALFGDSYAY
HHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
SYDLHTLARHYRAYHGLMAQWRAALPGRVIDVDYAQMVRDPSTVLQQLMAHCGLDIEPGQ
EHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHCCHHHHHHHHHHHCCCCCCCCE
IDITRNAAASATLSSVQVREGVHSRNVEEWRRYAVQLEPLRQALWQAGLIDAGVH
EEEECCCHHHHHHHHHHHHHCHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]