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The map label for this gene is glyS [H]

Identifier: 78049866

GI number: 78049866

Start: 4951778

End: 4954018

Strand: Reverse

Name: glyS [H]

Synonym: XCV4310

Alternate gene names: 78049866

Gene position: 4954018-4951778 (Counterclockwise)

Preceding gene: 78049867

Following gene: 78049865

Centisome position: 95.67

GC content: 65.51

Gene sequence:

>2241_bases
ATGAGCGAACAACTTCCCCTGCTGATCGAACTGGGCACCGAAGAGCTGCCGGTCAAGGCGCTGCCGGGTCTGGAGCAGGC
CTTTTTCGATGGCGTGCTGAGCGGCCTGGAAAAGCGCGGCGTTGCCGTCACCCGCGGCGATGCCAAGCCGCTGTCTACCC
CACGCCGTCTGGCGGTGCTGCTGCCGGGCGTGGCCACCGAGCAGCCGGAGCAGCGCTCGGAAGTGCTGGGGCCGTATCTC
AACATCGCCCTCGACGCCGAAGGCCAACCGACCAAGGCATTGGCCGGTTTCGCCGCCAAGGCCGGTATCGACTGGACCGC
GCTGGAACGCACCAGCGACGCCAAGGGCGAGCGTTTCGTGCATCGCGCAGTGACGCCGGGCGCGCGCACGGCCGACTTGT
TGCCGGAGATCCTGCGCGAGGCCATTGCCGCGATGCCCATCCCCAAGCCGATGCGCTGGGGCGCGCACGAGTACGCCTTC
GCACGGCCGGTGCAATGGTTGGTGCTGTTGTTCGGCAGCGAGGTGATTCCGGCCGAGTTGCTGGGCGTGCGCGGCGACCG
CATCACGCGCGGGCACCGCTTCATGCATGGGGGCGCAGTGTCGCTGGCGGCACCCGGCGACTACGTCGATGCGCTGCGTG
CGGCGCACGTGCTGGTGGATCCGGACGCGCGCCGTGCCCGCATCGTCGACGAAGTGCAGGCGGCCGTCAGGCAGGCCGGC
GGCAGCGCACGCATCAGCGACGACAACCTGGAGCAGGTGGTCAACCTGGTCGAATGGCCGGCGGCGGTGCTGTGCAGTTT
CGAACGCGATTTCCTGGCGGTGCCGCAGGAAGCGCTGATCGAAACCATGGAGATCAACCAGAAATTCTTCCCGGTGCTGG
ACGACGGCGGCACCTTGACCGAGCAGTTCATCGGCATCGCCAACATCCACTCCAAGGACGTGGCCGAAGTGGCCAAGGGC
TACGAGCGCGTGATCCGTCCGCGCTTTGCCGACGCCAAGTTCTTCTTCGACGAAGATCTCAAGCAGGGCCTGCAGGCGAT
GGGCGAAGGCCTATCCAGCGTCACCTATCAGGCCAAGCTGGGCACCGTGGCCGACAAGGTCGCGCGCGTGGCGGCGCTGG
CCGAGGCGATTGCACCGCAGATCGGTGCCGACCCGGTGCAGGCACGGCGTGCTGCGGAATTGGCCAAGAACGATCTGCAA
TCGCGCATGGTCAACGAATTCCCGGAATTGCAGGGCATTGCCGGCCGCCATTACGCCGAGGCCGCCGGCGAACCGAGCGA
GATTTCGCTGGCCATCGATGAGGCCTACCAACCGCGTTTTGCCGGCGACGACATCGCACTGTCGCCGCTGGGCAAGGTGT
TGGCGATTGCAGAACGGCTGGATACCTTGGCCGGTGGCTTTGCGGCCGGGTTGAAGCCGACCGGCAACAAGGACCCGTTC
GCGCTGCGGCGCAATGCGTTGGGGTTGGCGCGGACGGTGATTGAGAGTGGGTTTGATCTGGATTTGAAGAAGCTGCTTGT
TGAGGCAAGAAATCAGATCAATGTTCAGGCCAGTGCCAGGCAAACACTCAAGACAGAAGCTGCGCTAAGTAAAGCCAAGG
ACGCAGGAGCTGCTTTGCCGAAATCTGTCGAGAAGGAAGCACACACGGCGCTGGCACAGTCTGGCCAAGATGCCGAAATC
TTCGACTTCATCCTCGACCGCCTACGCGGCTATTACGCCGACAAGGGCGTACCTGCAACGCATTTCAACGCGGTCGCCGC
ATTGTTCTCCGTCACGTCCGAAGCCGTGCCGACACCGACCAACGTAGGAGCGCACCCGGGCGCGACCCACGCCTCCCTCT
ACGACTTCGACCGCCGCATCGATGCCATCGGCATCTTTGCCACGTTGCCCGAAGCCGACGCGTTGGCCGCGGCGAACAAG
CGCATCCGCAATATCCTGCGCAAGGTCGAGGGCGAGATCCCCGGTGACATCGACACCAGCCTGCTGCGCGAACCGGCCGA
ACAAGCCCTGGCCGAAGCGGTGGAAGCGGCCATCGGCGACACCGGCGATGCGCTGCACCGCCATGACTATGTCGCCGTGC
TCGCACGCCTGGCGCGCCTGCGCCCGCAGGTGGATGCGTTCTTCGACGGCGTGATGGTCAATGCCGACGACCCGCAGCTG
CGCGCCAACCGGCTCGCACTGCTGAAGAAGCTCGGCGACCGCCTCGGCAGCGTCGCCGCCATCGAGCACCTATCCAGCTG
A

Upstream 100 bases:

>100_bases
CATGCACCCAACCTCCACAGAGCTTCGCCCGTCCCCTCATCCGCCCCTTCGGGGCACCTTCTCCCGCAGGGAGAAGGGAC
TACGCAAAGGTCCATGTCAT

Downstream 100 bases:

>100_bases
TGTCCAGGTCGGCGGGCGCGCTGCACTGGCAGGCCGCCCAGGCCGCGTTGGCGCGGCGCGACCTGGGCGTGGCAGCGTCT
GCATTGCAGGCGCTGCTGGA

Product: glycyl-tRNA synthetase subunit beta

Products: NA

Alternate protein names: Glycine--tRNA ligase beta subunit; GlyRS [H]

Number of amino acids: Translated: 746; Mature: 745

Protein sequence:

>746_residues
MSEQLPLLIELGTEELPVKALPGLEQAFFDGVLSGLEKRGVAVTRGDAKPLSTPRRLAVLLPGVATEQPEQRSEVLGPYL
NIALDAEGQPTKALAGFAAKAGIDWTALERTSDAKGERFVHRAVTPGARTADLLPEILREAIAAMPIPKPMRWGAHEYAF
ARPVQWLVLLFGSEVIPAELLGVRGDRITRGHRFMHGGAVSLAAPGDYVDALRAAHVLVDPDARRARIVDEVQAAVRQAG
GSARISDDNLEQVVNLVEWPAAVLCSFERDFLAVPQEALIETMEINQKFFPVLDDGGTLTEQFIGIANIHSKDVAEVAKG
YERVIRPRFADAKFFFDEDLKQGLQAMGEGLSSVTYQAKLGTVADKVARVAALAEAIAPQIGADPVQARRAAELAKNDLQ
SRMVNEFPELQGIAGRHYAEAAGEPSEISLAIDEAYQPRFAGDDIALSPLGKVLAIAERLDTLAGGFAAGLKPTGNKDPF
ALRRNALGLARTVIESGFDLDLKKLLVEARNQINVQASARQTLKTEAALSKAKDAGAALPKSVEKEAHTALAQSGQDAEI
FDFILDRLRGYYADKGVPATHFNAVAALFSVTSEAVPTPTNVGAHPGATHASLYDFDRRIDAIGIFATLPEADALAAANK
RIRNILRKVEGEIPGDIDTSLLREPAEQALAEAVEAAIGDTGDALHRHDYVAVLARLARLRPQVDAFFDGVMVNADDPQL
RANRLALLKKLGDRLGSVAAIEHLSS

Sequences:

>Translated_746_residues
MSEQLPLLIELGTEELPVKALPGLEQAFFDGVLSGLEKRGVAVTRGDAKPLSTPRRLAVLLPGVATEQPEQRSEVLGPYL
NIALDAEGQPTKALAGFAAKAGIDWTALERTSDAKGERFVHRAVTPGARTADLLPEILREAIAAMPIPKPMRWGAHEYAF
ARPVQWLVLLFGSEVIPAELLGVRGDRITRGHRFMHGGAVSLAAPGDYVDALRAAHVLVDPDARRARIVDEVQAAVRQAG
GSARISDDNLEQVVNLVEWPAAVLCSFERDFLAVPQEALIETMEINQKFFPVLDDGGTLTEQFIGIANIHSKDVAEVAKG
YERVIRPRFADAKFFFDEDLKQGLQAMGEGLSSVTYQAKLGTVADKVARVAALAEAIAPQIGADPVQARRAAELAKNDLQ
SRMVNEFPELQGIAGRHYAEAAGEPSEISLAIDEAYQPRFAGDDIALSPLGKVLAIAERLDTLAGGFAAGLKPTGNKDPF
ALRRNALGLARTVIESGFDLDLKKLLVEARNQINVQASARQTLKTEAALSKAKDAGAALPKSVEKEAHTALAQSGQDAEI
FDFILDRLRGYYADKGVPATHFNAVAALFSVTSEAVPTPTNVGAHPGATHASLYDFDRRIDAIGIFATLPEADALAAANK
RIRNILRKVEGEIPGDIDTSLLREPAEQALAEAVEAAIGDTGDALHRHDYVAVLARLARLRPQVDAFFDGVMVNADDPQL
RANRLALLKKLGDRLGSVAAIEHLSS
>Mature_745_residues
SEQLPLLIELGTEELPVKALPGLEQAFFDGVLSGLEKRGVAVTRGDAKPLSTPRRLAVLLPGVATEQPEQRSEVLGPYLN
IALDAEGQPTKALAGFAAKAGIDWTALERTSDAKGERFVHRAVTPGARTADLLPEILREAIAAMPIPKPMRWGAHEYAFA
RPVQWLVLLFGSEVIPAELLGVRGDRITRGHRFMHGGAVSLAAPGDYVDALRAAHVLVDPDARRARIVDEVQAAVRQAGG
SARISDDNLEQVVNLVEWPAAVLCSFERDFLAVPQEALIETMEINQKFFPVLDDGGTLTEQFIGIANIHSKDVAEVAKGY
ERVIRPRFADAKFFFDEDLKQGLQAMGEGLSSVTYQAKLGTVADKVARVAALAEAIAPQIGADPVQARRAAELAKNDLQS
RMVNEFPELQGIAGRHYAEAAGEPSEISLAIDEAYQPRFAGDDIALSPLGKVLAIAERLDTLAGGFAAGLKPTGNKDPFA
LRRNALGLARTVIESGFDLDLKKLLVEARNQINVQASARQTLKTEAALSKAKDAGAALPKSVEKEAHTALAQSGQDAEIF
DFILDRLRGYYADKGVPATHFNAVAALFSVTSEAVPTPTNVGAHPGATHASLYDFDRRIDAIGIFATLPEADALAAANKR
IRNILRKVEGEIPGDIDTSLLREPAEQALAEAVEAAIGDTGDALHRHDYVAVLARLARLRPQVDAFFDGVMVNADDPQLR
ANRLALLKKLGDRLGSVAAIEHLSS

Specific function: Unknown

COG id: COG0751

COG function: function code J; Glycyl-tRNA synthetase, beta subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family [H]

Homologues:

Organism=Escherichia coli, GI1789982, Length=746, Percent_Identity=41.1528150134048, Blast_Score=496, Evalue=1e-141,

Paralogues:

None

Copy number: 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 400 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 1,800 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008909
- InterPro:   IPR006194
- InterPro:   IPR015944
- InterPro:   IPR002311 [H]

Pfam domain/function: PF05746 DALR_1; PF02092 tRNA_synt_2f [H]

EC number: =6.1.1.14 [H]

Molecular weight: Translated: 80062; Mature: 79931

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: PS50861 AA_TRNA_LIGASE_II_GLYAB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEQLPLLIELGTEELPVKALPGLEQAFFDGVLSGLEKRGVAVTRGDAKPLSTPRRLAVL
CCCCCCEEEEECCCCCCCHHCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHEE
LPGVATEQPEQRSEVLGPYLNIALDAEGQPTKALAGFAAKAGIDWTALERTSDAKGERFV
ECCCCCCCCHHHHHHCCHHHEEEECCCCCCHHHHHHHHHHCCCCHHHHCCCCCCCHHHHH
HRAVTPGARTADLLPEILREAIAAMPIPKPMRWGAHEYAFARPVQWLVLLFGSEVIPAEL
HHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHH
LGVRGDRITRGHRFMHGGAVSLAAPGDYVDALRAAHVLVDPDARRARIVDEVQAAVRQAG
HCCCCCCCCCCCCEECCCEEEECCCCHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHCC
GSARISDDNLEQVVNLVEWPAAVLCSFERDFLAVPQEALIETMEINQKFFPVLDDGGTLT
CCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHCCHHCCEECCCCHHH
EQFIGIANIHSKDVAEVAKGYERVIRPRFADAKFFFDEDLKQGLQAMGEGLSSVTYQAKL
HHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHH
GTVADKVARVAALAEAIAPQIGADPVQARRAAELAKNDLQSRMVNEFPELQGIAGRHYAE
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCHHHH
AAGEPSEISLAIDEAYQPRFAGDDIALSPLGKVLAIAERLDTLAGGFAAGLKPTGNKDPF
HCCCCCEEEEEEHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH
ALRRNALGLARTVIESGFDLDLKKLLVEARNQINVQASARQTLKTEAALSKAKDAGAALP
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCC
KSVEKEAHTALAQSGQDAEIFDFILDRLRGYYADKGVPATHFNAVAALFSVTSEAVPTPT
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCC
NVGAHPGATHASLYDFDRRIDAIGIFATLPEADALAAANKRIRNILRKVEGEIPGDIDTS
CCCCCCCCCHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
LLREPAEQALAEAVEAAIGDTGDALHRHDYVAVLARLARLRPQVDAFFDGVMVNADDPQL
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHCCEEECCCCCHH
RANRLALLKKLGDRLGSVAAIEHLSS
HHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SEQLPLLIELGTEELPVKALPGLEQAFFDGVLSGLEKRGVAVTRGDAKPLSTPRRLAVL
CCCCCEEEEECCCCCCCHHCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHEE
LPGVATEQPEQRSEVLGPYLNIALDAEGQPTKALAGFAAKAGIDWTALERTSDAKGERFV
ECCCCCCCCHHHHHHCCHHHEEEECCCCCCHHHHHHHHHHCCCCHHHHCCCCCCCHHHHH
HRAVTPGARTADLLPEILREAIAAMPIPKPMRWGAHEYAFARPVQWLVLLFGSEVIPAEL
HHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHH
LGVRGDRITRGHRFMHGGAVSLAAPGDYVDALRAAHVLVDPDARRARIVDEVQAAVRQAG
HCCCCCCCCCCCCEECCCEEEECCCCHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHCC
GSARISDDNLEQVVNLVEWPAAVLCSFERDFLAVPQEALIETMEINQKFFPVLDDGGTLT
CCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHCCHHCCEECCCCHHH
EQFIGIANIHSKDVAEVAKGYERVIRPRFADAKFFFDEDLKQGLQAMGEGLSSVTYQAKL
HHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHH
GTVADKVARVAALAEAIAPQIGADPVQARRAAELAKNDLQSRMVNEFPELQGIAGRHYAE
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCHHHH
AAGEPSEISLAIDEAYQPRFAGDDIALSPLGKVLAIAERLDTLAGGFAAGLKPTGNKDPF
HCCCCCEEEEEEHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH
ALRRNALGLARTVIESGFDLDLKKLLVEARNQINVQASARQTLKTEAALSKAKDAGAALP
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCC
KSVEKEAHTALAQSGQDAEIFDFILDRLRGYYADKGVPATHFNAVAALFSVTSEAVPTPT
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCC
NVGAHPGATHASLYDFDRRIDAIGIFATLPEADALAAANKRIRNILRKVEGEIPGDIDTS
CCCCCCCCCHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
LLREPAEQALAEAVEAAIGDTGDALHRHDYVAVLARLARLRPQVDAFFDGVMVNADDPQL
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHCCEEECCCCCHH
RANRLALLKKLGDRLGSVAAIEHLSS
HHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA