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The map label for this gene is 78049736

Identifier: 78049736

GI number: 78049736

Start: 4792240

End: 4792671

Strand: Reverse

Name: 78049736

Synonym: XCV4180

Alternate gene names: NA

Gene position: 4792671-4792240 (Counterclockwise)

Preceding gene: 78049737

Following gene: 78049734

Centisome position: 92.55

GC content: 65.97

Gene sequence:

>432_bases
ATGCAGGGACGTGACGCAATCGCTGCGCTGATTCCGCACCAGGGCAGCATGTGCCTGTGGGAAGAAGTGATTGAGTGGGA
TGCACAGCGCATTGTGCTGCGCAGTCACGCACACCGCAGCGATACGCATCCGCTGCGGTGCAACGGGCGTTTGCGCGCGC
TGCATCTGTGCGAGTACGGCGCGCAGGCCATGGCCGTGCATGGCGGATTGCTGGGTCGCCAATCCGGCATGCCGGTACGC
CCGGGCATGCTGGTCGCGCTGCGTAGCGTGGAATTGCACCTCGCCTATCTGGACGACCTGCCCGATGCCATCGATTGCGA
GGCGCAGGTGCTGATGCAGGGCGAGGACAGCCAGCAATACGGCTTCCGCCTGACCCATCGCGGGGAACTGCTCGCCGAAG
GCCGCGCCACGGTCATGCTGGGCGCCGCCTGA

Upstream 100 bases:

>100_bases
ATCGGCAGCACGGTGGCGCTGGGCGTGTTGTTCAATTTCATTCTGGCCTTGCTGGTGTCGCGCGAACCGGCGCTGGAACG
CACCGCGAACGGAGAGCCGC

Downstream 100 bases:

>100_bases
GGCCTGCGCTCAGGGATTGACGGGTGTCTTCGCCGCGATGAGCGCGCTCAGATTGCCGACGCCGGGCAGGCGGTGCGCAT
ACAGCCGCGCGATGTCACTG

Product: xanthomonadin biosynthesis protein

Products: NA

Alternate protein names: Potential 3-Hydroxydecyl-(Acyl Carrier Protein) Dehydratase; Beta-Hydroxyacyl-Acyl Carrier Protein-Dehydratase; 3-Oxoacyl-[Acyl-Carrier-Protein] Reductase; XanthomoNADin Biosynthesis Protein; -Hydroxymyristoyl-Acyl-Carrier-Protein Dehydratase; 3-Oxoacyl-[Acyl-Carrier Protein] Reductase; 3-Hydroxylacyl-(Acyl Carrier Protein) Dehydratase-Like

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MQGRDAIAALIPHQGSMCLWEEVIEWDAQRIVLRSHAHRSDTHPLRCNGRLRALHLCEYGAQAMAVHGGLLGRQSGMPVR
PGMLVALRSVELHLAYLDDLPDAIDCEAQVLMQGEDSQQYGFRLTHRGELLAEGRATVMLGAA

Sequences:

>Translated_143_residues
MQGRDAIAALIPHQGSMCLWEEVIEWDAQRIVLRSHAHRSDTHPLRCNGRLRALHLCEYGAQAMAVHGGLLGRQSGMPVR
PGMLVALRSVELHLAYLDDLPDAIDCEAQVLMQGEDSQQYGFRLTHRGELLAEGRATVMLGAA
>Mature_143_residues
MQGRDAIAALIPHQGSMCLWEEVIEWDAQRIVLRSHAHRSDTHPLRCNGRLRALHLCEYGAQAMAVHGGLLGRQSGMPVR
PGMLVALRSVELHLAYLDDLPDAIDCEAQVLMQGEDSQQYGFRLTHRGELLAEGRATVMLGAA

Specific function: Unknown

COG id: COG4706

COG function: function code I; Predicted 3-hydroxylacyl-(acyl carrier protein) dehydratase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15776; Mature: 15776

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGRDAIAALIPHQGSMCLWEEVIEWDAQRIVLRSHAHRSDTHPLRCNGRLRALHLCEYG
CCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCEEEEEEECCC
AQAMAVHGGLLGRQSGMPVRPGMLVALRSVELHLAYLDDLPDAIDCEAQVLMQGEDSQQY
CCEEEECCCCCCCCCCCCCCCCCEEEEEHHEEEEEEHHCCCCCCCCCEEEEEECCCCCCC
GFRLTHRGELLAEGRATVMLGAA
CEEEEECCCEEECCCEEEEEECC
>Mature Secondary Structure
MQGRDAIAALIPHQGSMCLWEEVIEWDAQRIVLRSHAHRSDTHPLRCNGRLRALHLCEYG
CCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCEEEEEEECCC
AQAMAVHGGLLGRQSGMPVRPGMLVALRSVELHLAYLDDLPDAIDCEAQVLMQGEDSQQY
CCEEEECCCCCCCCCCCCCCCCCEEEEEHHEEEEEEHHCCCCCCCCCEEEEEECCCCCCC
GFRLTHRGELLAEGRATVMLGAA
CEEEEECCCEEECCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA