| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78049737
Identifier: 78049737
GI number: 78049737
Start: 4792658
End: 4795024
Strand: Reverse
Name: 78049737
Synonym: XCV4181
Alternate gene names: NA
Gene position: 4795024-4792658 (Counterclockwise)
Preceding gene: 78049738
Following gene: 78049736
Centisome position: 92.6
GC content: 67.43
Gene sequence:
>2367_bases ATGGCGCTTGAATTGAACGCAAACCGCCGCATCGGCCTGGCGCTGTTTTGGCTGGCCTTGCTGGCAGTGGCTGGCTTCTG GTTGAGCGAGACGCTCAAGGTCACTGGGGACTTGCGCAAGTTCATGCCCGCCCCGCGCACGCCGGCGCAAAAACTGCTGA TCGAAGAACTCGGCGAAGGCCCTGGATCGCGGTTGCTGCTGATGGCGTTGTCCAACAACGATCCGGTCACCTTGGCCGAG CAGTCGCAGCAACTGCACCAGGCGCTGTCCGCGCAGCCGGCGTTGTTCGAACTGGTCAGCAATGGCGGCAATGCCGGATT GGAGGCGATTCCCAAGCGCTTGCTGCCGTACCGCTATCTGCTCAGCGACAGCTTCGACAAGACCCCGCTCGACGCGCCGA CGCTGGAAGCGGCGTTGCAGGCGCGCGTGCAGGATCTGGGCTCGCCGGCAGCGGCCATGGTGGAGCCGTTGTTGCCGCGC GACCCCACGATGGAAATCGTGCATCTGGCCGAAACCCTGCAGCCGGCAGCGATGCCGCGCACGCGCAATGACGTGTGGTT CGATCGCGCCGGCACTTCGGCGCTGTTGATCGTGCAGACCCGCGCGGCCGGCTTCGACCCCACCGGCCAGCAACTGGCCT ATGACGCCGTGCAGGCGGCGTTCGCGAAGGTCAGCAAGGGCACTGCCACCCGGCTGACGCTGACCGGGCCGGGCGCATTC GCGGTGGAAATCACCGCGCGCACGCAGGGCGAGGCGCAGTGGATCGGCACGCTGGATACGGTAGGCCTGGTGTTGCTGCT GCTGGTGGCCTACCGCAGCTGGAAGATTCCGGTGCTTGGCGTGTTGCCGCTGGCCAGCGCCGGTCTGGCCGGCCTGGGTG CGGTGGCGCTGCTGTTCGACGGCGTGCATGGCATCACCGTGGCATTCGGCTTCACGCTGATCGGCGTGGTGCAGGATTAC CCGATCCACCTGTTCAGTCATCAGCGCCCTGGTCTGGATCCGCGCGAGAACGCACGGCACCTGTGGCCAACACTGGCCAC CGGCGTGGTCTCTACCTGCATTGCCTATGTGACCTTCCTGTTTTCCGGCGTGGACGGCCTGCGGCAGTTGGCGGTGTTCA CCATCGCCGGCCTTGCCACCGCCGCGGTCACCACGCGCTGGCTGTTGCCGGCCTTGATCGATCCGGCCCCGCGCGACTAC GCGGACTCGCGCCTGCTGGCGGTGCTGTGGCGTGGCATTGCGCGCCTGCCGCGGCCACGCATCAGCCTGGCGGTGATGGC CGTGATCGGCATTGCGGTGATCGTGTTCGCGCCCGGGCAATTCTGGCAGAACGATCTGTCGAAGCTGACCCCGGTGCCAC CCAAGGCCTTGGCGCAGGACACCCATCTGCGTCAGGAGCTGGGCGCGCCGGATGTGCGTTACGTGCTGGCGCTGCCGGCA GCCAGCGATGAAGCGGCGTTGCAGGCCAGCGAGCAGTTGCGCCCGCGTCTGGATGCGCTGGTGCGCGATGGTGCGTTGCT CGGTTACGACATGGCGGCACGCTATCTGCCCAGTGCCAAGACCCAGCGTGCGCGACAGGCCGCGTTGCCCGATGCTGCCC AGGCGCGCGCGCTGACCGAGCGCGCCGTGGCCACCACGCCATTCCGCAGCGATGCGTTTGCGCCGTTCCTGCAGGATCTG GACGCCGCCAAGCGCGCTGCACCGCTGCTGCCGAAGGATCTGAGCGGCTCGCCGCTGGCCACGTCGGTCGGTGGCCTGCT GCTCGGCCGTGGCGATCGCAGCACCGCATTGGTGTCGTTGACCGGCCTGCGCGATCCGGCGGTGTTGGCGGCCGCCGTGC AGGGCAGCGGCGCGCAATTGCTGGATCTCAAGGACGCCTCCGAATCGCTGGTGGCCGCCTACCGCGGACGCGTGCTCGGT GCGCTGGTCCTTGCCGCATTGCTGCTGGCGGTGACCGTGGCGATTGCACTGCGCAGCCCGCGCCGCATCGTGCGGGTGCT GCTACCGATGGCGCTGACCACGGTGCTGATCCTGGCGATCCTGCGCGGCACCGGGGTGGAGCTCAATCTGTTCCATCTGA TCGCGCTGATCCTGGCCGCCGGTCTGGGCCTGGATTACGCGCTGTTCTTCGATCATGCCGGCGACGATCACGCCGACCAG CTGCGTACGCTGCACGCGTTGATCGTCTGCAGCCTGATGACACTGCTGGTGTTTGCGCTGTTGGCCGCTTCCAGTATCCC GGTCTTGCGTGCCATCGGCAGCACGGTGGCGCTGGGCGTGTTGTTCAATTTCATTCTGGCCTTGCTGGTGTCGCGCGAAC CGGCGCTGGAACGCACCGCGAACGGAGAGCCGCATGCAGGGACGTGA
Upstream 100 bases:
>100_bases AAGTTCATGCCCGCCCTCAGGAAAAACAACGCGTCGTTGCAGCCCGATGCCGCGCGCGCGGCCGGCGGGCGTTCGGCCGC TGCAGCAGGATATGCATGCC
Downstream 100 bases:
>100_bases CGCAATCGCTGCGCTGATTCCGCACCAGGGCAGCATGTGCCTGTGGGAAGAAGTGATTGAGTGGGATGCACAGCGCATTG TGCTGCGCAGTCACGCACAC
Product: xanthomonadin exporter
Products: NA
Alternate protein names: Transmembrane Protein; Mmpl Exporter Transmembrane Protein; XanthomoNADin Exporter; MMPL Domain Protein; RND Superfamily Drug Exporter; Patched Family Protein; Drug Efflux Pump RND Superfamily; Exporter TRANSMEMBRANE PROTEIN; Integral Membrane Protein; Lipoprotein Transmembrane; Phosphoglucomutase/Phosphomannomutase Alpha/Beta/Subunit
Number of amino acids: Translated: 788; Mature: 787
Protein sequence:
>788_residues MALELNANRRIGLALFWLALLAVAGFWLSETLKVTGDLRKFMPAPRTPAQKLLIEELGEGPGSRLLLMALSNNDPVTLAE QSQQLHQALSAQPALFELVSNGGNAGLEAIPKRLLPYRYLLSDSFDKTPLDAPTLEAALQARVQDLGSPAAAMVEPLLPR DPTMEIVHLAETLQPAAMPRTRNDVWFDRAGTSALLIVQTRAAGFDPTGQQLAYDAVQAAFAKVSKGTATRLTLTGPGAF AVEITARTQGEAQWIGTLDTVGLVLLLLVAYRSWKIPVLGVLPLASAGLAGLGAVALLFDGVHGITVAFGFTLIGVVQDY PIHLFSHQRPGLDPRENARHLWPTLATGVVSTCIAYVTFLFSGVDGLRQLAVFTIAGLATAAVTTRWLLPALIDPAPRDY ADSRLLAVLWRGIARLPRPRISLAVMAVIGIAVIVFAPGQFWQNDLSKLTPVPPKALAQDTHLRQELGAPDVRYVLALPA ASDEAALQASEQLRPRLDALVRDGALLGYDMAARYLPSAKTQRARQAALPDAAQARALTERAVATTPFRSDAFAPFLQDL DAAKRAAPLLPKDLSGSPLATSVGGLLLGRGDRSTALVSLTGLRDPAVLAAAVQGSGAQLLDLKDASESLVAAYRGRVLG ALVLAALLLAVTVAIALRSPRRIVRVLLPMALTTVLILAILRGTGVELNLFHLIALILAAGLGLDYALFFDHAGDDHADQ LRTLHALIVCSLMTLLVFALLAASSIPVLRAIGSTVALGVLFNFILALLVSREPALERTANGEPHAGT
Sequences:
>Translated_788_residues MALELNANRRIGLALFWLALLAVAGFWLSETLKVTGDLRKFMPAPRTPAQKLLIEELGEGPGSRLLLMALSNNDPVTLAE QSQQLHQALSAQPALFELVSNGGNAGLEAIPKRLLPYRYLLSDSFDKTPLDAPTLEAALQARVQDLGSPAAAMVEPLLPR DPTMEIVHLAETLQPAAMPRTRNDVWFDRAGTSALLIVQTRAAGFDPTGQQLAYDAVQAAFAKVSKGTATRLTLTGPGAF AVEITARTQGEAQWIGTLDTVGLVLLLLVAYRSWKIPVLGVLPLASAGLAGLGAVALLFDGVHGITVAFGFTLIGVVQDY PIHLFSHQRPGLDPRENARHLWPTLATGVVSTCIAYVTFLFSGVDGLRQLAVFTIAGLATAAVTTRWLLPALIDPAPRDY ADSRLLAVLWRGIARLPRPRISLAVMAVIGIAVIVFAPGQFWQNDLSKLTPVPPKALAQDTHLRQELGAPDVRYVLALPA ASDEAALQASEQLRPRLDALVRDGALLGYDMAARYLPSAKTQRARQAALPDAAQARALTERAVATTPFRSDAFAPFLQDL DAAKRAAPLLPKDLSGSPLATSVGGLLLGRGDRSTALVSLTGLRDPAVLAAAVQGSGAQLLDLKDASESLVAAYRGRVLG ALVLAALLLAVTVAIALRSPRRIVRVLLPMALTTVLILAILRGTGVELNLFHLIALILAAGLGLDYALFFDHAGDDHADQ LRTLHALIVCSLMTLLVFALLAASSIPVLRAIGSTVALGVLFNFILALLVSREPALERTANGEPHAGT >Mature_787_residues ALELNANRRIGLALFWLALLAVAGFWLSETLKVTGDLRKFMPAPRTPAQKLLIEELGEGPGSRLLLMALSNNDPVTLAEQ SQQLHQALSAQPALFELVSNGGNAGLEAIPKRLLPYRYLLSDSFDKTPLDAPTLEAALQARVQDLGSPAAAMVEPLLPRD PTMEIVHLAETLQPAAMPRTRNDVWFDRAGTSALLIVQTRAAGFDPTGQQLAYDAVQAAFAKVSKGTATRLTLTGPGAFA VEITARTQGEAQWIGTLDTVGLVLLLLVAYRSWKIPVLGVLPLASAGLAGLGAVALLFDGVHGITVAFGFTLIGVVQDYP IHLFSHQRPGLDPRENARHLWPTLATGVVSTCIAYVTFLFSGVDGLRQLAVFTIAGLATAAVTTRWLLPALIDPAPRDYA DSRLLAVLWRGIARLPRPRISLAVMAVIGIAVIVFAPGQFWQNDLSKLTPVPPKALAQDTHLRQELGAPDVRYVLALPAA SDEAALQASEQLRPRLDALVRDGALLGYDMAARYLPSAKTQRARQAALPDAAQARALTERAVATTPFRSDAFAPFLQDLD AAKRAAPLLPKDLSGSPLATSVGGLLLGRGDRSTALVSLTGLRDPAVLAAAVQGSGAQLLDLKDASESLVAAYRGRVLGA LVLAALLLAVTVAIALRSPRRIVRVLLPMALTTVLILAILRGTGVELNLFHLIALILAAGLGLDYALFFDHAGDDHADQL RTLHALIVCSLMTLLVFALLAASSIPVLRAIGSTVALGVLFNFILALLVSREPALERTANGEPHAGT
Specific function: Unknown
COG id: COG4258
COG function: function code R; Predicted exporter
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83610; Mature: 83478
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALELNANRRIGLALFWLALLAVAGFWLSETLKVTGDLRKFMPAPRTPAQKLLIEELGEG CEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC PGSRLLLMALSNNDPVTLAEQSQQLHQALSAQPALFELVSNGGNAGLEAIPKRLLPYRYL CCCEEEEEEECCCCCEEHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHCCHHHH LSDSFDKTPLDAPTLEAALQARVQDLGSPAAAMVEPLLPRDPTMEIVHLAETLQPAAMPR HCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCC TRNDVWFDRAGTSALLIVQTRAAGFDPTGQQLAYDAVQAAFAKVSKGTATRLTLTGPGAF CCCCCEEECCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEE AVEITARTQGEAQWIGTLDTVGLVLLLLVAYRSWKIPVLGVLPLASAGLAGLGAVALLFD EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHCCHHHHHHHHHHHC GVHGITVAFGFTLIGVVQDYPIHLFSHQRPGLDPRENARHLWPTLATGVVSTCIAYVTFL CHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHH FSGVDGLRQLAVFTIAGLATAAVTTRWLLPALIDPAPRDYADSRLLAVLWRGIARLPRPR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCH ISLAVMAVIGIAVIVFAPGQFWQNDLSKLTPVPPKALAQDTHLRQELGAPDVRYVLALPA HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECC ASDEAALQASEQLRPRLDALVRDGALLGYDMAARYLPSAKTQRARQAALPDAAQARALTE CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHH RAVATTPFRSDAFAPFLQDLDAAKRAAPLLPKDLSGSPLATSVGGLLLGRGDRSTALVSL HHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCEEECCCCCEEEEEE TGLRDPAVLAAAVQGSGAQLLDLKDASESLVAAYRGRVLGALVLAALLLAVTVAIALRSP ECCCCHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH RRIVRVLLPMALTTVLILAILRGTGVELNLFHLIALILAAGLGLDYALFFDHAGDDHADQ HHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHH LRTLHALIVCSLMTLLVFALLAASSIPVLRAIGSTVALGVLFNFILALLVSREPALERTA HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCC NGEPHAGT CCCCCCCC >Mature Secondary Structure ALELNANRRIGLALFWLALLAVAGFWLSETLKVTGDLRKFMPAPRTPAQKLLIEELGEG EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC PGSRLLLMALSNNDPVTLAEQSQQLHQALSAQPALFELVSNGGNAGLEAIPKRLLPYRYL CCCEEEEEEECCCCCEEHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHCCHHHH LSDSFDKTPLDAPTLEAALQARVQDLGSPAAAMVEPLLPRDPTMEIVHLAETLQPAAMPR HCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCC TRNDVWFDRAGTSALLIVQTRAAGFDPTGQQLAYDAVQAAFAKVSKGTATRLTLTGPGAF CCCCCEEECCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEE AVEITARTQGEAQWIGTLDTVGLVLLLLVAYRSWKIPVLGVLPLASAGLAGLGAVALLFD EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHCCHHHHHHHHHHHC GVHGITVAFGFTLIGVVQDYPIHLFSHQRPGLDPRENARHLWPTLATGVVSTCIAYVTFL CHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHH FSGVDGLRQLAVFTIAGLATAAVTTRWLLPALIDPAPRDYADSRLLAVLWRGIARLPRPR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCH ISLAVMAVIGIAVIVFAPGQFWQNDLSKLTPVPPKALAQDTHLRQELGAPDVRYVLALPA HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECC ASDEAALQASEQLRPRLDALVRDGALLGYDMAARYLPSAKTQRARQAALPDAAQARALTE CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHH RAVATTPFRSDAFAPFLQDLDAAKRAAPLLPKDLSGSPLATSVGGLLLGRGDRSTALVSL HHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCEEECCCCCEEEEEE TGLRDPAVLAAAVQGSGAQLLDLKDASESLVAAYRGRVLGALVLAALLLAVTVAIALRSP ECCCCHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH RRIVRVLLPMALTTVLILAILRGTGVELNLFHLIALILAAGLGLDYALFFDHAGDDHADQ HHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHH LRTLHALIVCSLMTLLVFALLAASSIPVLRAIGSTVALGVLFNFILALLVSREPALERTA HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCC NGEPHAGT CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA