| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is aceK [H]
Identifier: 78049514
GI number: 78049514
Start: 4542876
End: 4544615
Strand: Reverse
Name: aceK [H]
Synonym: XCV3958
Alternate gene names: 78049514
Gene position: 4544615-4542876 (Counterclockwise)
Preceding gene: 78049515
Following gene: 78049513
Centisome position: 87.76
GC content: 63.05
Gene sequence:
>1740_bases ATGAGCCATCCACCCTTGCCACCACAATCCGAGCGCCGCGCGCTGGCGATCGCCCAGGCCGTGTACGAAGCGTTCGAGGA CTATCACGCGCGCTTTTCCGAAATCACCGCACGCGCCAAGCAGCGGTTCGAAACACGCGACTGGAGCGGCGCGCGCGAAG ACGCGGTAGCGCGCATCGCGCTGTACGACCAATACATCGCCGAATGCATGTTGCGCCTGCGTGCAGTACTGCTGGGCCAG GCGCACGATCGCGCGCTGTGGATGCGTGCGCGCGATCATTACGCCGCCTTGCTGAGCGGGTTGATCGACCAGGAGTTGTA CAAGACGTTCTACAACACCCTGACCCGGCGCTACTTCGGTACCCACGGCGTCGATGCCGATATCGAATTCATCGCCCTGG ATATCGAACCGACCGACGCCATCACCGTGCCTGTTGCGCGCCACACCTATGCGGTCTCGCCCGGCCGCCTGACCGACATG CTGGTGCGGGTGCTCGGCGACTACGCGTTCGCCGTACCGTATACGCACCGCACCCGCTGCGCGGCCGCCATCGCGGTGCG TCTGCTCGACGATCTTGCGCATTGGGGCGAGCATCCGGTGCGCAGCGTGGAATTACTGGAGACGGTGTTCTATCGCGAGC GGCGCGCGTATCTGGTCGGACGCGTGTTCGGCGAACATCGCTTTTCGCCGTGCGTGATCGCGCTGATCAACGACGAGGCG GGCCTGCGCGCCGAAGCGGTGTTGACCCGGCGCAGCGATGTCGCGCAATTGTTCAGTAACTCGCGTAGCTATTTTCAAGC CGACCTGTCCACTGTCGGCGACGCGGTGGTGTTCCTGCGCAGCCTGCTCACCCACAAGCCGGTCGATGAGCTATACACGA TGCTGGGTCGCGCCAAACAGGGCAAGACCGAGCGTTACCGCACGTTTTTCAGTCATTTTCAGGCGCATCCGTCCGAACAG CTGGTGCACGCCGACGGCACTCCCGGCATGGTCATGGTGGTGTTTACGCTGCCCAGTTATCCGCTGGTCTTCAAACTCAT TCGCGACCGCTTTGCGTATCCCAAAACCATGAGCCGCGCGCAGGTAGAGGGCAAGTACGAGCTGGTCTTCCAGCTCGACC GCATCGGCCGCCTGCTCGACGCGCAGCCGTATCGCTTCCTGCGCTTCCCCAAGGCGCGCTTCTCACCGGCGTTGCTGCAA GAACTGCAGACCAGCTGCGCGATGAGCCTGAGCGAAGACGGCGACGATGTCCTGATCGCACTGTGCTATGTGCAGCGCCG GTTGCGCCCGTTGAATTTGTACCTGCGCGAACAATTGCCCGAAGCCGCGCATGCCGCAGCGCTGGACTACGGCCAGGCCA TCAAGGACATGGCGCGCAACAACATCTTTCCTGGCGACATGCTGCTGAAGAATTTCGGCATTACCCGCCATCAGCGCGCG GTGTTCTACGACTACGACGAGCTATGCCTGATCACCGAATGCAACTTCCGCGATTGGCCAGTGCCCACCACTTACGAAGA ACAGATGGCCGCAGAACCCTGGTTCCATGTCGGCCCGCGCGACGTCTTTCCCGAGCGCTTCGCCTTGTTCATGGGCCTGC CCGCCTCGCAACTGGAAGCGGTCAAGCACCAGCACCCGGAACTGTTCGACCCACGCTGGTGGCGCGACCTGCAGAGCCGG CTGCGCGAAGACGATTATCCCGACACCCCGCCCTATGCGGAGTCGCGCAGGCTGGCGTAG
Upstream 100 bases:
>100_bases CCTGGCTGCAGGGCCAGGCGCGCGAACACGCCGCGCATGCGCAGCAGGCGACCGCCATACCACTTGCCGCGCGCCGCAAG CGCTCCGGGACACTGCCGCC
Downstream 100 bases:
>100_bases CGATTTACCGGCAGCGGCAACACTGGTACAACGCACGCTACATCATCAGGGAGTGCGGTCATGCAATGGAAGCAGCGTTT CAGTCTTGGCATCTTGCTGG
Product: bifunctional isocitrate dehydrogenase kinase/phosphatase protein
Products: NA
Alternate protein names: IDH kinase/phosphatase; IDHK/P [H]
Number of amino acids: Translated: 579; Mature: 578
Protein sequence:
>579_residues MSHPPLPPQSERRALAIAQAVYEAFEDYHARFSEITARAKQRFETRDWSGAREDAVARIALYDQYIAECMLRLRAVLLGQ AHDRALWMRARDHYAALLSGLIDQELYKTFYNTLTRRYFGTHGVDADIEFIALDIEPTDAITVPVARHTYAVSPGRLTDM LVRVLGDYAFAVPYTHRTRCAAAIAVRLLDDLAHWGEHPVRSVELLETVFYRERRAYLVGRVFGEHRFSPCVIALINDEA GLRAEAVLTRRSDVAQLFSNSRSYFQADLSTVGDAVVFLRSLLTHKPVDELYTMLGRAKQGKTERYRTFFSHFQAHPSEQ LVHADGTPGMVMVVFTLPSYPLVFKLIRDRFAYPKTMSRAQVEGKYELVFQLDRIGRLLDAQPYRFLRFPKARFSPALLQ ELQTSCAMSLSEDGDDVLIALCYVQRRLRPLNLYLREQLPEAAHAAALDYGQAIKDMARNNIFPGDMLLKNFGITRHQRA VFYDYDELCLITECNFRDWPVPTTYEEQMAAEPWFHVGPRDVFPERFALFMGLPASQLEAVKHQHPELFDPRWWRDLQSR LREDDYPDTPPYAESRRLA
Sequences:
>Translated_579_residues MSHPPLPPQSERRALAIAQAVYEAFEDYHARFSEITARAKQRFETRDWSGAREDAVARIALYDQYIAECMLRLRAVLLGQ AHDRALWMRARDHYAALLSGLIDQELYKTFYNTLTRRYFGTHGVDADIEFIALDIEPTDAITVPVARHTYAVSPGRLTDM LVRVLGDYAFAVPYTHRTRCAAAIAVRLLDDLAHWGEHPVRSVELLETVFYRERRAYLVGRVFGEHRFSPCVIALINDEA GLRAEAVLTRRSDVAQLFSNSRSYFQADLSTVGDAVVFLRSLLTHKPVDELYTMLGRAKQGKTERYRTFFSHFQAHPSEQ LVHADGTPGMVMVVFTLPSYPLVFKLIRDRFAYPKTMSRAQVEGKYELVFQLDRIGRLLDAQPYRFLRFPKARFSPALLQ ELQTSCAMSLSEDGDDVLIALCYVQRRLRPLNLYLREQLPEAAHAAALDYGQAIKDMARNNIFPGDMLLKNFGITRHQRA VFYDYDELCLITECNFRDWPVPTTYEEQMAAEPWFHVGPRDVFPERFALFMGLPASQLEAVKHQHPELFDPRWWRDLQSR LREDDYPDTPPYAESRRLA >Mature_578_residues SHPPLPPQSERRALAIAQAVYEAFEDYHARFSEITARAKQRFETRDWSGAREDAVARIALYDQYIAECMLRLRAVLLGQA HDRALWMRARDHYAALLSGLIDQELYKTFYNTLTRRYFGTHGVDADIEFIALDIEPTDAITVPVARHTYAVSPGRLTDML VRVLGDYAFAVPYTHRTRCAAAIAVRLLDDLAHWGEHPVRSVELLETVFYRERRAYLVGRVFGEHRFSPCVIALINDEAG LRAEAVLTRRSDVAQLFSNSRSYFQADLSTVGDAVVFLRSLLTHKPVDELYTMLGRAKQGKTERYRTFFSHFQAHPSEQL VHADGTPGMVMVVFTLPSYPLVFKLIRDRFAYPKTMSRAQVEGKYELVFQLDRIGRLLDAQPYRFLRFPKARFSPALLQE LQTSCAMSLSEDGDDVLIALCYVQRRLRPLNLYLREQLPEAAHAAALDYGQAIKDMARNNIFPGDMLLKNFGITRHQRAV FYDYDELCLITECNFRDWPVPTTYEEQMAAEPWFHVGPRDVFPERFALFMGLPASQLEAVKHQHPELFDPRWWRDLQSRL REDDYPDTPPYAESRRLA
Specific function: Bifunctional enzyme which can phosphorylate or dephosphorylate isocitrate dehydrogenase (IDH) on a specific serine residue. This is a regulatory mechanism which enables bacteria to bypass the Krebs cycle via the glyoxylate shunt in response to the source
COG id: COG4579
COG function: function code T; Isocitrate dehydrogenase kinase/phosphatase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AceK family [H]
Homologues:
Organism=Escherichia coli, GI1790446, Length=566, Percent_Identity=34.8056537102473, Blast_Score=338, Evalue=7e-94,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010452 - ProDom: PD043552 [H]
Pfam domain/function: PF06315 AceK [H]
EC number: =2.7.11.5 [H]
Molecular weight: Translated: 66816; Mature: 66685
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHPPLPPQSERRALAIAQAVYEAFEDYHARFSEITARAKQRFETRDWSGAREDAVARIA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH LYDQYIAECMLRLRAVLLGQAHDRALWMRARDHYAALLSGLIDQELYKTFYNTLTRRYFG HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC THGVDADIEFIALDIEPTDAITVPVARHTYAVSPGRLTDMLVRVLGDYAFAVPYTHRTRC CCCCCCCEEEEEEEECCCCCEEECEECCEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHH AAAIAVRLLDDLAHWGEHPVRSVELLETVFYRERRAYLVGRVFGEHRFSPCVIALINDEA HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCC GLRAEAVLTRRSDVAQLFSNSRSYFQADLSTVGDAVVFLRSLLTHKPVDELYTMLGRAKQ CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC GKTERYRTFFSHFQAHPSEQLVHADGTPGMVMVVFTLPSYPLVFKLIRDRFAYPKTMSRA CCHHHHHHHHHHHHCCCCCCEEECCCCCCEEEEEEECCCHHHHHHHHHHHHCCCHHHHHH QVEGKYELVFQLDRIGRLLDAQPYRFLRFPKARFSPALLQELQTSCAMSLSEDGDDVLIA HCCCHHHHHHHHHHHHHHHCCCCHHHHCCCHHCCCHHHHHHHHHHHHHHCCCCCCHHHHH LCYVQRRLRPLNLYLREQLPEAAHAAALDYGQAIKDMARNNIFPGDMLLKNFGITRHQRA HHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCE VFYDYDELCLITECNFRDWPVPTTYEEQMAAEPWFHVGPRDVFPERFALFMGLPASQLEA EEECCCCEEEEEECCCCCCCCCCCHHHHHCCCCCCCCCCHHHCHHHHHHHHCCCHHHHHH VKHQHPELFDPRWWRDLQSRLREDDYPDTPPYAESRRLA HHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SHPPLPPQSERRALAIAQAVYEAFEDYHARFSEITARAKQRFETRDWSGAREDAVARIA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH LYDQYIAECMLRLRAVLLGQAHDRALWMRARDHYAALLSGLIDQELYKTFYNTLTRRYFG HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC THGVDADIEFIALDIEPTDAITVPVARHTYAVSPGRLTDMLVRVLGDYAFAVPYTHRTRC CCCCCCCEEEEEEEECCCCCEEECEECCEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHH AAAIAVRLLDDLAHWGEHPVRSVELLETVFYRERRAYLVGRVFGEHRFSPCVIALINDEA HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCC GLRAEAVLTRRSDVAQLFSNSRSYFQADLSTVGDAVVFLRSLLTHKPVDELYTMLGRAKQ CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC GKTERYRTFFSHFQAHPSEQLVHADGTPGMVMVVFTLPSYPLVFKLIRDRFAYPKTMSRA CCHHHHHHHHHHHHCCCCCCEEECCCCCCEEEEEEECCCHHHHHHHHHHHHCCCHHHHHH QVEGKYELVFQLDRIGRLLDAQPYRFLRFPKARFSPALLQELQTSCAMSLSEDGDDVLIA HCCCHHHHHHHHHHHHHHHCCCCHHHHCCCHHCCCHHHHHHHHHHHHHHCCCCCCHHHHH LCYVQRRLRPLNLYLREQLPEAAHAAALDYGQAIKDMARNNIFPGDMLLKNFGITRHQRA HHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCE VFYDYDELCLITECNFRDWPVPTTYEEQMAAEPWFHVGPRDVFPERFALFMGLPASQLEA EEECCCCEEEEEECCCCCCCCCCCHHHHHCCCCCCCCCCHHHCHHHHHHHHCCCHHHHHH VKHQHPELFDPRWWRDLQSRLREDDYPDTPPYAESRRLA HHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]