Click here to switch to the map view.

The map label for this gene is 78049513

Identifier: 78049513

GI number: 78049513

Start: 4541931

End: 4542815

Strand: Reverse

Name: 78049513

Synonym: XCV3957

Alternate gene names: NA

Gene position: 4542815-4541931 (Counterclockwise)

Preceding gene: 78049514

Following gene: 78049510

Centisome position: 87.73

GC content: 64.07

Gene sequence:

>885_bases
ATGCAATGGAAGCAGCGTTTCAGTCTTGGCATCTTGCTGGCATTGAGCAGCATCGCAGCGACGCAGGCACGTCCAGGCGC
AGAACAGGCGCACATGCAGATTGAGGCCAGCATGAATGTGGCAGGCGAGTTGACCCTGACCCCGGACGGCACGGTCACGG
CAGTGAAGCTTGCCGACGAAGCGAGTTTGCCGCCGGCAGTGCGCGAGCGGATCAAGCGTTCGGTCGCATCGTGGCGCTTC
GACCCTGTGCGCGACAACGGAAGCGCCTTGCCCGCGCAGTTGCCGATGAGCCTGCTGCTGGTCGCCAAACAGGGGGAAGG
GGAAAATTATCTGGTGTCGATCCGTAGCGCGCATTTTGGCGGCCAGGCGCAGGACGCGACGAGTGTGCGCACCAACGACA
TGCGGCCGCCGCGCTACCCCGAAGCGGCGTTTCGGGCCGGTGCCACCGGCGTGGTCTATCTGATGCTCAAGATCGGGCGC
GACGGCAAGGTCCAGGATCTGATCGCAGAGCAAGTCAACCTGACATCCCTCGTACCGGAATCCAAACGTGCACGGTTGCG
CCAGGCGTTTGCCGATGCGGCCTCGACGAAGGCGCGTGCATGGACGTTTCTGCCGCCGACAGAGGGTCCGGACGTCAAGG
CGCCGTACTGGGTCATGCGTGTTCCGGTCAGCTTCGACATCGGAACGTCGCCACGCGATCTGATCGCCGCACAACAGGTC
CAGAAATGGCGTTCGTATCTGCCTGGCACCCGTCAGGCCGCCCCATGGGATGAACAGCGCGGCGCAGCGACATCGAGCGA
CAGCCCGGATGCCCTGCCTGCCAGCGGGTTGTTCTCCGCACGCGGGGAAGGTGTTCGCCTGGTCACGCCGCTGCAAGGAA
GTTGA

Upstream 100 bases:

>100_bases
CGACACCCCGCCCTATGCGGAGTCGCGCAGGCTGGCGTAGCGATTTACCGGCAGCGGCAACACTGGTACAACGCACGCTA
CATCATCAGGGAGTGCGGTC

Downstream 100 bases:

>100_bases
GCGCGGCTCACAGAGCTGACAGAGAAGGCTAAAGCCTGCGCAACGGCCGCCTCGCACAAAGCCTGCCAGCGGGTTGTTCT
CCGCACGCGGGGAAGGTGTT

Product: putative secreted protein

Products: NA

Alternate protein names: NB Dependent Receptor Protein; NB Family Protein; Secreted Protein

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MQWKQRFSLGILLALSSIAATQARPGAEQAHMQIEASMNVAGELTLTPDGTVTAVKLADEASLPPAVRERIKRSVASWRF
DPVRDNGSALPAQLPMSLLLVAKQGEGENYLVSIRSAHFGGQAQDATSVRTNDMRPPRYPEAAFRAGATGVVYLMLKIGR
DGKVQDLIAEQVNLTSLVPESKRARLRQAFADAASTKARAWTFLPPTEGPDVKAPYWVMRVPVSFDIGTSPRDLIAAQQV
QKWRSYLPGTRQAAPWDEQRGAATSSDSPDALPASGLFSARGEGVRLVTPLQGS

Sequences:

>Translated_294_residues
MQWKQRFSLGILLALSSIAATQARPGAEQAHMQIEASMNVAGELTLTPDGTVTAVKLADEASLPPAVRERIKRSVASWRF
DPVRDNGSALPAQLPMSLLLVAKQGEGENYLVSIRSAHFGGQAQDATSVRTNDMRPPRYPEAAFRAGATGVVYLMLKIGR
DGKVQDLIAEQVNLTSLVPESKRARLRQAFADAASTKARAWTFLPPTEGPDVKAPYWVMRVPVSFDIGTSPRDLIAAQQV
QKWRSYLPGTRQAAPWDEQRGAATSSDSPDALPASGLFSARGEGVRLVTPLQGS
>Mature_294_residues
MQWKQRFSLGILLALSSIAATQARPGAEQAHMQIEASMNVAGELTLTPDGTVTAVKLADEASLPPAVRERIKRSVASWRF
DPVRDNGSALPAQLPMSLLLVAKQGEGENYLVSIRSAHFGGQAQDATSVRTNDMRPPRYPEAAFRAGATGVVYLMLKIGR
DGKVQDLIAEQVNLTSLVPESKRARLRQAFADAASTKARAWTFLPPTEGPDVKAPYWVMRVPVSFDIGTSPRDLIAAQQV
QKWRSYLPGTRQAAPWDEQRGAATSSDSPDALPASGLFSARGEGVRLVTPLQGS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31745; Mature: 31745

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQWKQRFSLGILLALSSIAATQARPGAEQAHMQIEASMNVAGELTLTPDGTVTAVKLADE
CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHEEEEECCCCCEEEEECCCCCEEEEEECCC
ASLPPAVRERIKRSVASWRFDPVRDNGSALPAQLPMSLLLVAKQGEGENYLVSIRSAHFG
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCEEEEEEEECCCCCEEEEEEECCCCC
GQAQDATSVRTNDMRPPRYPEAAFRAGATGVVYLMLKIGRDGKVQDLIAEQVNLTSLVPE
CCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHCCCC
SKRARLRQAFADAASTKARAWTFLPPTEGPDVKAPYWVMRVPVSFDIGTSPRDLIAAQQV
HHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEEEEEEEEEECCCCHHHHHHHHHH
QKWRSYLPGTRQAAPWDEQRGAATSSDSPDALPASGLFSARGEGVRLVTPLQGS
HHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCHHCCCCCEEEECCCCCC
>Mature Secondary Structure
MQWKQRFSLGILLALSSIAATQARPGAEQAHMQIEASMNVAGELTLTPDGTVTAVKLADE
CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHEEEEECCCCCEEEEECCCCCEEEEEECCC
ASLPPAVRERIKRSVASWRFDPVRDNGSALPAQLPMSLLLVAKQGEGENYLVSIRSAHFG
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCEEEEEEEECCCCCEEEEEEECCCCC
GQAQDATSVRTNDMRPPRYPEAAFRAGATGVVYLMLKIGRDGKVQDLIAEQVNLTSLVPE
CCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHCCCC
SKRARLRQAFADAASTKARAWTFLPPTEGPDVKAPYWVMRVPVSFDIGTSPRDLIAAQQV
HHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEEEEEEEEEECCCCHHHHHHHHHH
QKWRSYLPGTRQAAPWDEQRGAATSSDSPDALPASGLFSARGEGVRLVTPLQGS
HHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCHHCCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA