| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is rhlB [H]
Identifier: 78049510
GI number: 78049510
Start: 4537342
End: 4539063
Strand: Reverse
Name: rhlB [H]
Synonym: XCV3954
Alternate gene names: 78049510
Gene position: 4539063-4537342 (Counterclockwise)
Preceding gene: 78049513
Following gene: 78049509
Centisome position: 87.65
GC content: 68.06
Gene sequence:
>1722_bases ATGAGCGACAAACCGCTGACCGATGTGACCTTTTCCTCGTTCGATCTGCATCCGGCCTTGATCGCCGGGCTGGAGAGCGC CGGGTTTACCCGCTGTACCCCGATCCAGGCGCTGACCTTGCCGGTCGCGCTGCCGGGCGGCGATGTCGCCGGCCAGGCCC AGACCGGTACCGGCAAGACCTTGGCGTTCCTGGTCGCGGTGATGAATCGGCTGCTGATCCGCCCGGCCCTGGCCGACCGC AAGCCGGAAGACCCGCGCGCGCTGATCCTGGCGCCGACCCGCGAGCTGGCGATCCAGATCCACAAGGACGCAGTGAAGTT CGGCGCCGACCTTGGCCTGCGCTTTGCGCTGGTCTATGGCGGGGTGGATTACGACAAACAGCGCGAACTGTTGCAGCAGG GCGTGGACGTGATCATCGCCACCCCGGGCCGCCTGATCGACTACGTCAAGCAGCACAAGGTGGTCTCGCTGCACGCCTGC GAGATCTGCGTGCTGGACGAGGCCGACCGCATGTTCGACCTGGGCTTCATCAAGGACATCCGCTTCCTGCTGCGGCGCAT GCCCGAGCGCGGCACCCGGCAGACGTTGTTGTTCTCGGCCACGCTCAGCCACCGCGTGCTGGAGCTGGCCTACGAGCACA TGAACGAGCCGGAAAAGCTGGTCGTCGAAACCGAAAGCATCACCGCTGCGCGGGTGCGCCAGCGCATCTATTTCCCCTCC GACGAAGAGAAGCAGACGCTGCTGTTGGGCTTGCTGTCGCGCAGCGAAGGCGCGCGCACCATGGTGTTCGTCAATACCAA GGCGTTCGTGGAGCGCGTGGCGCGCACCCTGGAGCGGCACGGCTACCGGGTCGGCGTGCTGTCGGGCGATGTGCCGCAGA AGAAGCGCGAGTCGCTGCTCAACCGCTTCCAGAAAGGCCAGCTCGAAATCCTGGTCGCCACCGACGTGGCTGCGCGCGGT CTGCATATCGATGGCGTCAAGTACGTCTACAACTACGACTTGCCGTTCGACGCCGAAGACTACGTCCATCGCATCGGCCG CACCGCACGCCTGGGCGAGGAAGGCGATGCGATCAGCTTCGCCTGCGAACGCTATGCGATGAGCCTGCCGGACATCGAGG CCTATATCGAGCAGAAGATCCCGGTCGAGCCGGTGACGTCCGAACTGCTGACGCCGCTGCCGCGTGCGCCACGCGTGCCG GTGGAAGGCGAAGAGGCCGACGACGACGCTGGCGACAGCGTGGGCACGATCTTCCGCGAAGCGCGCGAGCAGCGCGCCGC CGAAGAACAGCGTCGCGGTGGCGGGCGCAGTGGTTCGGGCGGGTCGCGCAGCGGCAGTGGCGGTGGCGGTGGTCGCCGCG AAGGCGCCGGTGCCGATGGCAAGCCGCGTCCGCGTCGCAAGCCACGGGTGGAAGGCCAGGCGCCTGCAACTGCGGCGTCG ACCGAACATCCGGTCGTTGCCGCAGCGGCGGGACAGGCACCTTCCGCGGGCGTGGCCGATGCCGAGCGCGCGCCACGCAA GCGTCGGCGTCGTCGTAACGGTCGTCCGGTCGAGGGTGCCGAGCCGGCAGTGGCATCCACGCCGGTTCCCGCACCTGCCG CACCGCGTAAGCCCACCCAGGTGGTTGCCAAGCCGGTGCGTGCCGCCGCCAAGCCGTCGGGCAGCCCCTCGCTGCTCAGC CGGATCGGCCGCCGACTGCGTTCGCTGGTCTCAGGCAACTGA
Upstream 100 bases:
>100_bases GAAGCCGCGCTGTCCGCCACAACAGCCGCAGTTTGCGACGCTGTCGGCATCGATGCAAGCCGCGCCCGGGCTGCCCAGGG CGCCTCACGAAGACGGAATA
Downstream 100 bases:
>100_bases CCGTTTGCGGCACTGATCGCATCGCCGCGCATCGGCGATGCGACGCAAGCACTGACGCTCCGGCATAATCGCTGAATGAC CGTTCTGCGTTTCGACAACG
Product: ATP-dependent RNA helicase RhlB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 573; Mature: 572
Protein sequence:
>573_residues MSDKPLTDVTFSSFDLHPALIAGLESAGFTRCTPIQALTLPVALPGGDVAGQAQTGTGKTLAFLVAVMNRLLIRPALADR KPEDPRALILAPTRELAIQIHKDAVKFGADLGLRFALVYGGVDYDKQRELLQQGVDVIIATPGRLIDYVKQHKVVSLHAC EICVLDEADRMFDLGFIKDIRFLLRRMPERGTRQTLLFSATLSHRVLELAYEHMNEPEKLVVETESITAARVRQRIYFPS DEEKQTLLLGLLSRSEGARTMVFVNTKAFVERVARTLERHGYRVGVLSGDVPQKKRESLLNRFQKGQLEILVATDVAARG LHIDGVKYVYNYDLPFDAEDYVHRIGRTARLGEEGDAISFACERYAMSLPDIEAYIEQKIPVEPVTSELLTPLPRAPRVP VEGEEADDDAGDSVGTIFREAREQRAAEEQRRGGGRSGSGGSRSGSGGGGGRREGAGADGKPRPRRKPRVEGQAPATAAS TEHPVVAAAAGQAPSAGVADAERAPRKRRRRRNGRPVEGAEPAVASTPVPAPAAPRKPTQVVAKPVRAAAKPSGSPSLLS RIGRRLRSLVSGN
Sequences:
>Translated_573_residues MSDKPLTDVTFSSFDLHPALIAGLESAGFTRCTPIQALTLPVALPGGDVAGQAQTGTGKTLAFLVAVMNRLLIRPALADR KPEDPRALILAPTRELAIQIHKDAVKFGADLGLRFALVYGGVDYDKQRELLQQGVDVIIATPGRLIDYVKQHKVVSLHAC EICVLDEADRMFDLGFIKDIRFLLRRMPERGTRQTLLFSATLSHRVLELAYEHMNEPEKLVVETESITAARVRQRIYFPS DEEKQTLLLGLLSRSEGARTMVFVNTKAFVERVARTLERHGYRVGVLSGDVPQKKRESLLNRFQKGQLEILVATDVAARG LHIDGVKYVYNYDLPFDAEDYVHRIGRTARLGEEGDAISFACERYAMSLPDIEAYIEQKIPVEPVTSELLTPLPRAPRVP VEGEEADDDAGDSVGTIFREAREQRAAEEQRRGGGRSGSGGSRSGSGGGGGRREGAGADGKPRPRRKPRVEGQAPATAAS TEHPVVAAAAGQAPSAGVADAERAPRKRRRRRNGRPVEGAEPAVASTPVPAPAAPRKPTQVVAKPVRAAAKPSGSPSLLS RIGRRLRSLVSGN >Mature_572_residues SDKPLTDVTFSSFDLHPALIAGLESAGFTRCTPIQALTLPVALPGGDVAGQAQTGTGKTLAFLVAVMNRLLIRPALADRK PEDPRALILAPTRELAIQIHKDAVKFGADLGLRFALVYGGVDYDKQRELLQQGVDVIIATPGRLIDYVKQHKVVSLHACE ICVLDEADRMFDLGFIKDIRFLLRRMPERGTRQTLLFSATLSHRVLELAYEHMNEPEKLVVETESITAARVRQRIYFPSD EEKQTLLLGLLSRSEGARTMVFVNTKAFVERVARTLERHGYRVGVLSGDVPQKKRESLLNRFQKGQLEILVATDVAARGL HIDGVKYVYNYDLPFDAEDYVHRIGRTARLGEEGDAISFACERYAMSLPDIEAYIEQKIPVEPVTSELLTPLPRAPRVPV EGEEADDDAGDSVGTIFREAREQRAAEEQRRGGGRSGSGGSRSGSGGGGGRREGAGADGKPRPRRKPRVEGQAPATAAST EHPVVAAAAGQAPSAGVADAERAPRKRRRRRNGRPVEGAEPAVASTPVPAPAAPRKPTQVVAKPVRAAAKPSGSPSLLSR IGRRLRSLVSGN
Specific function: Can carry out ATP-dependent unwinding of double stranded RNA. Has a role in RNA decay. Involved in the RNA degradosome, a multi-enzyme complex important in RNA processing and messenger RNA degradation [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI222352149, Length=388, Percent_Identity=40.2061855670103, Blast_Score=254, Evalue=2e-67, Organism=Homo sapiens, GI301171467, Length=389, Percent_Identity=38.0462724935733, Blast_Score=249, Evalue=4e-66, Organism=Homo sapiens, GI87196351, Length=389, Percent_Identity=38.0462724935733, Blast_Score=249, Evalue=6e-66, Organism=Homo sapiens, GI301171475, Length=389, Percent_Identity=38.0462724935733, Blast_Score=249, Evalue=6e-66, Organism=Homo sapiens, GI169881239, Length=389, Percent_Identity=38.0462724935733, Blast_Score=247, Evalue=2e-65, Organism=Homo sapiens, GI13514809, Length=389, Percent_Identity=38.0462724935733, Blast_Score=247, Evalue=2e-65, Organism=Homo sapiens, GI41327771, Length=378, Percent_Identity=37.5661375661376, Blast_Score=246, Evalue=6e-65, Organism=Homo sapiens, GI224593278, Length=368, Percent_Identity=37.7717391304348, Blast_Score=239, Evalue=5e-63, Organism=Homo sapiens, GI20149629, Length=457, Percent_Identity=33.4792122538293, Blast_Score=237, Evalue=2e-62, Organism=Homo sapiens, GI45446747, Length=354, Percent_Identity=38.4180790960452, Blast_Score=236, Evalue=4e-62, Organism=Homo sapiens, GI45446743, Length=354, Percent_Identity=38.4180790960452, Blast_Score=236, Evalue=4e-62, Organism=Homo sapiens, GI13518015, Length=363, Percent_Identity=38.5674931129477, Blast_Score=234, Evalue=2e-61, Organism=Homo sapiens, GI262231852, Length=363, Percent_Identity=38.5674931129477, Blast_Score=234, Evalue=2e-61, Organism=Homo sapiens, GI216548263, Length=363, Percent_Identity=38.5674931129477, Blast_Score=234, Evalue=2e-61, Organism=Homo sapiens, GI148613856, Length=336, Percent_Identity=40.4761904761905, Blast_Score=233, Evalue=3e-61, Organism=Homo sapiens, GI38201710, Length=336, Percent_Identity=40.4761904761905, Blast_Score=233, Evalue=3e-61, Organism=Homo sapiens, GI262118318, Length=363, Percent_Identity=38.5674931129477, Blast_Score=233, Evalue=3e-61, Organism=Homo sapiens, GI4758138, Length=337, Percent_Identity=39.7626112759644, Blast_Score=222, Evalue=6e-58, Organism=Homo sapiens, GI41327773, Length=356, Percent_Identity=37.6404494382022, Blast_Score=216, Evalue=5e-56, Organism=Homo sapiens, GI21071032, Length=383, Percent_Identity=37.0757180156658, Blast_Score=215, Evalue=8e-56, Organism=Homo sapiens, GI7661920, Length=380, Percent_Identity=34.2105263157895, Blast_Score=214, Evalue=2e-55, Organism=Homo sapiens, GI55749865, Length=354, Percent_Identity=33.6158192090396, Blast_Score=205, Evalue=7e-53, Organism=Homo sapiens, GI188035877, Length=361, Percent_Identity=35.7340720221607, Blast_Score=205, Evalue=1e-52, Organism=Homo sapiens, GI51094101, Length=368, Percent_Identity=34.5108695652174, Blast_Score=199, Evalue=7e-51, Organism=Homo sapiens, GI164419743, Length=368, Percent_Identity=34.5108695652174, Blast_Score=199, Evalue=8e-51, Organism=Homo sapiens, GI13514831, Length=385, Percent_Identity=34.5454545454545, Blast_Score=198, Evalue=1e-50, Organism=Homo sapiens, GI41327776, Length=457, Percent_Identity=30.6345733041575, Blast_Score=197, Evalue=3e-50, Organism=Homo sapiens, GI50659095, Length=373, Percent_Identity=34.8525469168901, Blast_Score=195, Evalue=9e-50, Organism=Homo sapiens, GI31542656, Length=380, Percent_Identity=33.6842105263158, Blast_Score=191, Evalue=1e-48, Organism=Homo sapiens, GI164664518, Length=398, Percent_Identity=30.6532663316583, Blast_Score=191, Evalue=2e-48, Organism=Homo sapiens, GI41327779, Length=404, Percent_Identity=34.9009900990099, Blast_Score=188, Evalue=9e-48, Organism=Homo sapiens, GI8922886, Length=392, Percent_Identity=32.6530612244898, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI6005743, Length=392, Percent_Identity=32.1428571428571, Blast_Score=186, Evalue=5e-47, Organism=Homo sapiens, GI13129006, Length=379, Percent_Identity=35.6200527704486, Blast_Score=185, Evalue=1e-46, Organism=Homo sapiens, GI83700235, Length=379, Percent_Identity=31.9261213720317, Blast_Score=178, Evalue=1e-44, Organism=Homo sapiens, GI4503529, Length=379, Percent_Identity=32.1899736147757, Blast_Score=177, Evalue=2e-44, Organism=Homo sapiens, GI62241022, Length=366, Percent_Identity=32.2404371584699, Blast_Score=174, Evalue=3e-43, Organism=Homo sapiens, GI4758112, Length=390, Percent_Identity=29.4871794871795, Blast_Score=171, Evalue=1e-42, Organism=Homo sapiens, GI18375623, Length=390, Percent_Identity=29.4871794871795, Blast_Score=171, Evalue=1e-42, Organism=Homo sapiens, GI21040371, Length=390, Percent_Identity=30.5128205128205, Blast_Score=169, Evalue=9e-42, Organism=Homo sapiens, GI38569505, Length=389, Percent_Identity=29.5629820051414, Blast_Score=167, Evalue=3e-41, Organism=Homo sapiens, GI38569503, Length=374, Percent_Identity=29.9465240641711, Blast_Score=166, Evalue=4e-41, Organism=Homo sapiens, GI164419732, Length=374, Percent_Identity=31.8181818181818, Blast_Score=166, Evalue=5e-41, Organism=Homo sapiens, GI38327634, Length=348, Percent_Identity=32.183908045977, Blast_Score=166, Evalue=7e-41, Organism=Homo sapiens, GI17505907, Length=409, Percent_Identity=29.0953545232274, Blast_Score=164, Evalue=3e-40, Organism=Homo sapiens, GI62241024, Length=348, Percent_Identity=32.183908045977, Blast_Score=164, Evalue=3e-40, Organism=Homo sapiens, GI256773275, Length=415, Percent_Identity=31.8072289156626, Blast_Score=159, Evalue=8e-39, Organism=Homo sapiens, GI256223453, Length=367, Percent_Identity=27.7929155313352, Blast_Score=155, Evalue=1e-37, Organism=Homo sapiens, GI9506931, Length=400, Percent_Identity=28.75, Blast_Score=152, Evalue=6e-37, Organism=Homo sapiens, GI154759257, Length=492, Percent_Identity=29.6747967479675, Blast_Score=150, Evalue=4e-36, Organism=Homo sapiens, GI9966805, Length=337, Percent_Identity=31.1572700296736, Blast_Score=136, Evalue=6e-32, Organism=Homo sapiens, GI20336298, Length=229, Percent_Identity=34.4978165938865, Blast_Score=127, Evalue=3e-29, Organism=Homo sapiens, GI4826686, Length=337, Percent_Identity=29.9703264094956, Blast_Score=114, Evalue=2e-25, Organism=Escherichia coli, GI1790214, Length=400, Percent_Identity=55.75, Blast_Score=441, Evalue=1e-125, Organism=Escherichia coli, GI1787016, Length=374, Percent_Identity=40.3743315508021, Blast_Score=266, Evalue=2e-72, Organism=Escherichia coli, GI87082221, Length=385, Percent_Identity=38.1818181818182, Blast_Score=250, Evalue=2e-67, Organism=Escherichia coli, GI1788930, Length=398, Percent_Identity=39.6984924623116, Blast_Score=231, Evalue=1e-61, Organism=Escherichia coli, GI1787605, Length=413, Percent_Identity=37.046004842615, Blast_Score=219, Evalue=6e-58, Organism=Caenorhabditis elegans, GI71995718, Length=388, Percent_Identity=39.9484536082474, Blast_Score=251, Evalue=1e-66, Organism=Caenorhabditis elegans, GI71995514, Length=366, Percent_Identity=39.8907103825137, Blast_Score=242, Evalue=4e-64, Organism=Caenorhabditis elegans, GI17510309, Length=366, Percent_Identity=39.8907103825137, Blast_Score=242, Evalue=4e-64, Organism=Caenorhabditis elegans, GI17510307, Length=366, Percent_Identity=39.8907103825137, Blast_Score=242, Evalue=4e-64, Organism=Caenorhabditis elegans, GI17510559, Length=392, Percent_Identity=35.7142857142857, Blast_Score=236, Evalue=2e-62, Organism=Caenorhabditis elegans, GI115533224, Length=365, Percent_Identity=36.1643835616438, Blast_Score=231, Evalue=9e-61, Organism=Caenorhabditis elegans, GI86570094, Length=361, Percent_Identity=38.5041551246537, Blast_Score=230, Evalue=2e-60, Organism=Caenorhabditis elegans, GI17555296, Length=440, Percent_Identity=34.0909090909091, Blast_Score=226, Evalue=3e-59, Organism=Caenorhabditis elegans, GI32565321, Length=363, Percent_Identity=36.3636363636364, Blast_Score=225, Evalue=6e-59, Organism=Caenorhabditis elegans, GI17552642, Length=388, Percent_Identity=34.7938144329897, Blast_Score=220, Evalue=2e-57, Organism=Caenorhabditis elegans, GI17507879, Length=376, Percent_Identity=36.968085106383, Blast_Score=216, Evalue=2e-56, Organism=Caenorhabditis elegans, GI17507877, Length=377, Percent_Identity=36.0742705570292, Blast_Score=212, Evalue=4e-55, Organism=Caenorhabditis elegans, GI71987143, Length=379, Percent_Identity=34.3007915567282, Blast_Score=211, Evalue=8e-55, Organism=Caenorhabditis elegans, GI71995724, Length=380, Percent_Identity=33.4210526315789, Blast_Score=210, Evalue=1e-54, Organism=Caenorhabditis elegans, GI17507121, Length=380, Percent_Identity=33.4210526315789, Blast_Score=210, Evalue=2e-54, Organism=Caenorhabditis elegans, GI17507881, Length=371, Percent_Identity=36.1185983827493, Blast_Score=207, Evalue=1e-53, Organism=Caenorhabditis elegans, GI17509811, Length=362, Percent_Identity=34.5303867403315, Blast_Score=201, Evalue=1e-51, Organism=Caenorhabditis elegans, GI17507945, Length=357, Percent_Identity=35.5742296918768, Blast_Score=199, Evalue=2e-51, Organism=Caenorhabditis elegans, GI17537549, Length=360, Percent_Identity=36.1111111111111, Blast_Score=197, Evalue=1e-50, Organism=Caenorhabditis elegans, GI71999644, Length=392, Percent_Identity=32.9081632653061, Blast_Score=193, Evalue=2e-49, Organism=Caenorhabditis elegans, GI71999646, Length=387, Percent_Identity=33.3333333333333, Blast_Score=192, Evalue=3e-49, Organism=Caenorhabditis elegans, GI17552114, Length=405, Percent_Identity=30.6172839506173, Blast_Score=191, Evalue=7e-49, Organism=Caenorhabditis elegans, GI115532548, Length=392, Percent_Identity=32.6530612244898, Blast_Score=181, Evalue=8e-46, Organism=Caenorhabditis elegans, GI115532546, Length=392, Percent_Identity=32.6530612244898, Blast_Score=180, Evalue=1e-45, Organism=Caenorhabditis elegans, GI17536103, Length=404, Percent_Identity=30.4455445544554, Blast_Score=172, Evalue=3e-43, Organism=Caenorhabditis elegans, GI193208216, Length=429, Percent_Identity=31.7016317016317, Blast_Score=172, Evalue=4e-43, Organism=Caenorhabditis elegans, GI17536101, Length=403, Percent_Identity=30.0248138957816, Blast_Score=169, Evalue=3e-42, Organism=Caenorhabditis elegans, GI17536099, Length=404, Percent_Identity=30.4455445544554, Blast_Score=169, Evalue=5e-42, Organism=Caenorhabditis elegans, GI17505370, Length=351, Percent_Identity=33.3333333333333, Blast_Score=167, Evalue=2e-41, Organism=Caenorhabditis elegans, GI71990816, Length=378, Percent_Identity=32.5396825396825, Blast_Score=166, Evalue=2e-41, Organism=Caenorhabditis elegans, GI17507641, Length=392, Percent_Identity=33.4183673469388, Blast_Score=165, Evalue=8e-41, Organism=Caenorhabditis elegans, GI71982858, Length=357, Percent_Identity=30.2521008403361, Blast_Score=162, Evalue=6e-40, Organism=Caenorhabditis elegans, GI32564046, Length=368, Percent_Identity=33.9673913043478, Blast_Score=155, Evalue=5e-38, Organism=Caenorhabditis elegans, GI17508543, Length=380, Percent_Identity=28.4210526315789, Blast_Score=152, Evalue=3e-37, Organism=Caenorhabditis elegans, GI193206561, Length=362, Percent_Identity=29.2817679558011, Blast_Score=150, Evalue=1e-36, Organism=Caenorhabditis elegans, GI25148203, Length=445, Percent_Identity=26.5168539325843, Blast_Score=143, Evalue=3e-34, Organism=Caenorhabditis elegans, GI17556951, Length=360, Percent_Identity=30.8333333333333, Blast_Score=141, Evalue=8e-34, Organism=Caenorhabditis elegans, GI17553716, Length=372, Percent_Identity=27.4193548387097, Blast_Score=134, Evalue=9e-32, Organism=Caenorhabditis elegans, GI71997889, Length=351, Percent_Identity=28.4900284900285, Blast_Score=124, Evalue=2e-28, Organism=Caenorhabditis elegans, GI25148205, Length=366, Percent_Identity=26.2295081967213, Blast_Score=108, Evalue=9e-24, Organism=Caenorhabditis elegans, GI25148291, Length=331, Percent_Identity=26.5861027190332, Blast_Score=103, Evalue=2e-22, Organism=Caenorhabditis elegans, GI71987152, Length=103, Percent_Identity=40.7766990291262, Blast_Score=92, Evalue=1e-18, Organism=Caenorhabditis elegans, GI71982862, Length=211, Percent_Identity=28.9099526066351, Blast_Score=89, Evalue=5e-18, Organism=Saccharomyces cerevisiae, GI6324217, Length=366, Percent_Identity=40.1639344262295, Blast_Score=244, Evalue=2e-65, Organism=Saccharomyces cerevisiae, GI6325138, Length=473, Percent_Identity=35.9408033826639, Blast_Score=242, Evalue=1e-64, Organism=Saccharomyces cerevisiae, GI6321856, Length=441, Percent_Identity=35.6009070294785, Blast_Score=240, Evalue=4e-64, Organism=Saccharomyces cerevisiae, GI6321360, Length=363, Percent_Identity=39.6694214876033, Blast_Score=233, Evalue=5e-62, Organism=Saccharomyces cerevisiae, GI6324778, Length=368, Percent_Identity=38.8586956521739, Blast_Score=233, Evalue=8e-62, Organism=Saccharomyces cerevisiae, GI6323021, Length=362, Percent_Identity=35.6353591160221, Blast_Score=229, Evalue=1e-60, Organism=Saccharomyces cerevisiae, GI6320224, Length=379, Percent_Identity=32.7176781002639, Blast_Score=205, Evalue=1e-53, Organism=Saccharomyces cerevisiae, GI6320041, Length=377, Percent_Identity=32.3607427055703, Blast_Score=199, Evalue=1e-51, Organism=Saccharomyces cerevisiae, GI6323947, Length=345, Percent_Identity=35.9420289855072, Blast_Score=191, Evalue=2e-49, Organism=Saccharomyces cerevisiae, GI6321963, Length=385, Percent_Identity=34.5454545454545, Blast_Score=191, Evalue=3e-49, Organism=Saccharomyces cerevisiae, GI6320449, Length=354, Percent_Identity=33.8983050847458, Blast_Score=189, Evalue=1e-48, Organism=Saccharomyces cerevisiae, GI6320173, Length=441, Percent_Identity=30.1587301587302, Blast_Score=183, Evalue=5e-47, Organism=Saccharomyces cerevisiae, GI6322427, Length=348, Percent_Identity=33.6206896551724, Blast_Score=177, Evalue=4e-45, Organism=Saccharomyces cerevisiae, GI6322912, Length=385, Percent_Identity=31.6883116883117, Blast_Score=176, Evalue=8e-45, Organism=Saccharomyces cerevisiae, GI6322323, Length=385, Percent_Identity=31.6883116883117, Blast_Score=176, Evalue=8e-45, Organism=Saccharomyces cerevisiae, GI6319714, Length=366, Percent_Identity=31.1475409836066, Blast_Score=176, Evalue=1e-44, Organism=Saccharomyces cerevisiae, GI6324620, Length=383, Percent_Identity=31.8537859007833, Blast_Score=169, Evalue=1e-42, Organism=Saccharomyces cerevisiae, GI6320400, Length=418, Percent_Identity=31.3397129186603, Blast_Score=166, Evalue=8e-42, Organism=Saccharomyces cerevisiae, GI6320119, Length=360, Percent_Identity=29.4444444444444, Blast_Score=158, Evalue=2e-39, Organism=Saccharomyces cerevisiae, GI6321267, Length=377, Percent_Identity=31.0344827586207, Blast_Score=157, Evalue=4e-39, Organism=Saccharomyces cerevisiae, GI6321111, Length=368, Percent_Identity=30.9782608695652, Blast_Score=154, Evalue=5e-38, Organism=Saccharomyces cerevisiae, GI6323306, Length=413, Percent_Identity=27.6029055690073, Blast_Score=148, Evalue=3e-36, Organism=Saccharomyces cerevisiae, GI6319618, Length=405, Percent_Identity=29.1358024691358, Blast_Score=139, Evalue=2e-33, Organism=Saccharomyces cerevisiae, GI6322876, Length=465, Percent_Identity=27.9569892473118, Blast_Score=126, Evalue=8e-30, Organism=Saccharomyces cerevisiae, GI6324366, Length=415, Percent_Identity=24.0963855421687, Blast_Score=108, Evalue=3e-24, Organism=Drosophila melanogaster, GI28574962, Length=372, Percent_Identity=38.7096774193548, Blast_Score=258, Evalue=7e-69, Organism=Drosophila melanogaster, GI21356161, Length=436, Percent_Identity=35.5504587155963, Blast_Score=250, Evalue=2e-66, Organism=Drosophila melanogaster, GI24662330, Length=365, Percent_Identity=40.2739726027397, Blast_Score=249, Evalue=5e-66, Organism=Drosophila melanogaster, GI24584399, Length=359, Percent_Identity=38.7186629526462, Blast_Score=245, Evalue=5e-65, Organism=Drosophila melanogaster, GI18857967, Length=370, Percent_Identity=38.1081081081081, Blast_Score=238, Evalue=7e-63, Organism=Drosophila melanogaster, GI17985987, Length=397, Percent_Identity=39.0428211586902, Blast_Score=238, Evalue=8e-63, Organism=Drosophila melanogaster, GI24584994, Length=397, Percent_Identity=36.272040302267, Blast_Score=238, Evalue=1e-62, Organism=Drosophila melanogaster, GI24644479, Length=369, Percent_Identity=37.940379403794, Blast_Score=236, Evalue=4e-62, Organism=Drosophila melanogaster, GI24644483, Length=369, Percent_Identity=37.940379403794, Blast_Score=235, Evalue=5e-62, Organism=Drosophila melanogaster, GI281361218, Length=369, Percent_Identity=37.940379403794, Blast_Score=235, Evalue=6e-62, Organism=Drosophila melanogaster, GI24644481, Length=369, Percent_Identity=37.940379403794, Blast_Score=235, Evalue=6e-62, Organism=Drosophila melanogaster, GI24644487, Length=369, Percent_Identity=37.940379403794, Blast_Score=235, Evalue=7e-62, Organism=Drosophila melanogaster, GI45551833, Length=369, Percent_Identity=37.940379403794, Blast_Score=235, Evalue=7e-62, Organism=Drosophila melanogaster, GI24644485, Length=369, Percent_Identity=37.940379403794, Blast_Score=235, Evalue=7e-62, Organism=Drosophila melanogaster, GI24642151, Length=349, Percent_Identity=38.6819484240688, Blast_Score=230, Evalue=2e-60, Organism=Drosophila melanogaster, GI24645031, Length=380, Percent_Identity=33.4210526315789, Blast_Score=215, Evalue=7e-56, Organism=Drosophila melanogaster, GI24585582, Length=367, Percent_Identity=35.6948228882834, Blast_Score=214, Evalue=2e-55, Organism=Drosophila melanogaster, GI21355075, Length=383, Percent_Identity=36.0313315926893, Blast_Score=211, Evalue=9e-55, Organism=Drosophila melanogaster, GI281365720, Length=321, Percent_Identity=37.6947040498442, Blast_Score=208, Evalue=1e-53, Organism=Drosophila melanogaster, GI17136814, Length=393, Percent_Identity=34.0966921119593, Blast_Score=203, Evalue=3e-52, Organism=Drosophila melanogaster, GI17977678, Length=418, Percent_Identity=33.2535885167464, Blast_Score=202, Evalue=6e-52, Organism=Drosophila melanogaster, GI24583281, Length=360, Percent_Identity=33.0555555555556, Blast_Score=191, Evalue=1e-48, Organism=Drosophila melanogaster, GI24583279, Length=430, Percent_Identity=30.6976744186047, Blast_Score=191, Evalue=1e-48, Organism=Drosophila melanogaster, GI28575014, Length=371, Percent_Identity=33.4231805929919, Blast_Score=190, Evalue=3e-48, Organism=Drosophila melanogaster, GI24582080, Length=377, Percent_Identity=32.6259946949602, Blast_Score=186, Evalue=5e-47, Organism=Drosophila melanogaster, GI24582078, Length=377, Percent_Identity=32.6259946949602, Blast_Score=186, Evalue=5e-47, Organism=Drosophila melanogaster, GI17136248, Length=377, Percent_Identity=32.6259946949602, Blast_Score=186, Evalue=5e-47, Organism=Drosophila melanogaster, GI24582075, Length=377, Percent_Identity=32.6259946949602, Blast_Score=186, Evalue=5e-47, Organism=Drosophila melanogaster, GI28571808, Length=360, Percent_Identity=32.2222222222222, Blast_Score=170, Evalue=2e-42, Organism=Drosophila melanogaster, GI28571809, Length=360, Percent_Identity=32.2222222222222, Blast_Score=170, Evalue=2e-42, Organism=Drosophila melanogaster, GI21355559, Length=400, Percent_Identity=34.25, Blast_Score=163, Evalue=2e-40, Organism=Drosophila melanogaster, GI24642822, Length=370, Percent_Identity=30.8108108108108, Blast_Score=163, Evalue=4e-40, Organism=Drosophila melanogaster, GI24581954, Length=359, Percent_Identity=29.8050139275766, Blast_Score=159, Evalue=5e-39, Organism=Drosophila melanogaster, GI24581952, Length=359, Percent_Identity=29.8050139275766, Blast_Score=159, Evalue=5e-39, Organism=Drosophila melanogaster, GI24581956, Length=359, Percent_Identity=29.8050139275766, Blast_Score=159, Evalue=5e-39, Organism=Drosophila melanogaster, GI24666101, Length=372, Percent_Identity=31.4516129032258, Blast_Score=158, Evalue=1e-38, Organism=Drosophila melanogaster, GI24643725, Length=410, Percent_Identity=28.2926829268293, Blast_Score=157, Evalue=2e-38, Organism=Drosophila melanogaster, GI20130173, Length=427, Percent_Identity=30.6791569086651, Blast_Score=155, Evalue=8e-38, Organism=Drosophila melanogaster, GI17647335, Length=397, Percent_Identity=30.2267002518892, Blast_Score=147, Evalue=2e-35, Organism=Drosophila melanogaster, GI19920478, Length=370, Percent_Identity=28.9189189189189, Blast_Score=141, Evalue=1e-33, Organism=Drosophila melanogaster, GI24668515, Length=330, Percent_Identity=30.9090909090909, Blast_Score=127, Evalue=1e-29, Organism=Drosophila melanogaster, GI24640164, Length=371, Percent_Identity=26.9541778975741, Blast_Score=119, Evalue=7e-27, Organism=Drosophila melanogaster, GI17136666, Length=411, Percent_Identity=25.3041362530414, Blast_Score=117, Evalue=3e-26, Organism=Drosophila melanogaster, GI18859659, Length=243, Percent_Identity=30.0411522633745, Blast_Score=103, Evalue=2e-22, Organism=Drosophila melanogaster, GI28571338, Length=243, Percent_Identity=30.0411522633745, Blast_Score=103, Evalue=3e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR022077 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF12300 DUF3628; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 62200; Mature: 62069
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDKPLTDVTFSSFDLHPALIAGLESAGFTRCTPIQALTLPVALPGGDVAGQAQTGTGKT CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCHH LAFLVAVMNRLLIRPALADRKPEDPRALILAPTRELAIQIHKDAVKFGADLGLRFALVYG HHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCEEEEEEEC GVDYDKQRELLQQGVDVIIATPGRLIDYVKQHKVVSLHACEICVLDEADRMFDLGFIKDI CCCHHHHHHHHHCCCCEEEECCHHHHHHHHHCCEEEEEEEEEEEECCCCHHHHHHHHHHH RFLLRRMPERGTRQTLLFSATLSHRVLELAYEHMNEPEKLVVETESITAARVRQRIYFPS HHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHCCCCC DEEKQTLLLGLLSRSEGARTMVFVNTKAFVERVARTLERHGYRVGVLSGDVPQKKRESLL CCCHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHH NRFQKGQLEILVATDVAARGLHIDGVKYVYNYDLPFDAEDYVHRIGRTARLGEEGDAISF HHHCCCCEEEEEEECHHHCCEEECCEEEEEECCCCCCHHHHHHHCCCHHCCCCCCCHHHH ACERYAMSLPDIEAYIEQKIPVEPVTSELLTPLPRAPRVPVEGEEADDDAGDSVGTIFRE HHHHHHCCCCHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH AREQRAAEEQRRGGGRSGSGGSRSGSGGGGGRREGAGADGKPRPRRKPRVEGQAPATAAS HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TEHPVVAAAAGQAPSAGVADAERAPRKRRRRRNGRPVEGAEPAVASTPVPAPAAPRKPTQ CCCCEEEEECCCCCCCCCCHHHHCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHH VVAKPVRAAAKPSGSPSLLSRIGRRLRSLVSGN HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SDKPLTDVTFSSFDLHPALIAGLESAGFTRCTPIQALTLPVALPGGDVAGQAQTGTGKT CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCHH LAFLVAVMNRLLIRPALADRKPEDPRALILAPTRELAIQIHKDAVKFGADLGLRFALVYG HHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCEEEEEEEC GVDYDKQRELLQQGVDVIIATPGRLIDYVKQHKVVSLHACEICVLDEADRMFDLGFIKDI CCCHHHHHHHHHCCCCEEEECCHHHHHHHHHCCEEEEEEEEEEEECCCCHHHHHHHHHHH RFLLRRMPERGTRQTLLFSATLSHRVLELAYEHMNEPEKLVVETESITAARVRQRIYFPS HHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHCCCCC DEEKQTLLLGLLSRSEGARTMVFVNTKAFVERVARTLERHGYRVGVLSGDVPQKKRESLL CCCHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHH NRFQKGQLEILVATDVAARGLHIDGVKYVYNYDLPFDAEDYVHRIGRTARLGEEGDAISF HHHCCCCEEEEEEECHHHCCEEECCEEEEEECCCCCCHHHHHHHCCCHHCCCCCCCHHHH ACERYAMSLPDIEAYIEQKIPVEPVTSELLTPLPRAPRVPVEGEEADDDAGDSVGTIFRE HHHHHHCCCCHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH AREQRAAEEQRRGGGRSGSGGSRSGSGGGGGRREGAGADGKPRPRRKPRVEGQAPATAAS HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TEHPVVAAAAGQAPSAGVADAERAPRKRRRRRNGRPVEGAEPAVASTPVPAPAAPRKPTQ CCCCEEEEECCCCCCCCCCHHHHCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHH VVAKPVRAAAKPSGSPSLLSRIGRRLRSLVSGN HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA