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The map label for this gene is ybeC [H]

Identifier: 78049393

GI number: 78049393

Start: 4421728

End: 4423323

Strand: Reverse

Name: ybeC [H]

Synonym: XCV3837

Alternate gene names: 78049393

Gene position: 4423323-4421728 (Counterclockwise)

Preceding gene: 78049394

Following gene: 78049391

Centisome position: 85.42

GC content: 66.1

Gene sequence:

>1596_bases
ATGTCCGAACACTCGCTACGCCGCGACGTTGGCCCCTTCGCCCTCATGCTCACCGGCCTGGGCTCGATCATTGGCTCTGG
TTGGCTGTTCGGCGCCTGGCGCGCGGCCGGCCTGGCCGGCCCCGGCGCGATCTGGGCCTGGGTGCTGGGCGCGGCGATCA
TCACCACCATCGCGCTGTCGTATGCCGAGCTGGGCGCCATGTTCCCCGAATCCGGCGGCATGGTGCGCTACAGCCATTAT
TCGCACGGCTCGCTGGTGGGTTTCATTGCCGGCTGGGCCAACTGGATCGCCATCGTCTCGGTGATCCCGGTCGAGGCCGA
GGCCTCGGTGCAGTACATGGCGTCCTGGCCATGGGCCTGGGCGCAGGGCTTGTATGTGCAGGCGCCTGGTGGGGCAGGCG
AGCTCTCTGTGCCCGGCCTGCTGATTTCCGCGGTGCTGGTGCTGGTGTATTTCTTTCTGAATTTCTGGAGCGTCAAGCTG
TTCGCACGCTCCAATACGCTGATCACCGTGTTCAAGCTGGTGGTGCCTGCCGCCACTGGCGTGGCGCTGATCGCCAGCGG
CTTCCATAGCGAAAACTTCAGCGTCGGCATCCACGGCGATTCGCATGTGCTCGACCTGGCTGCGGTGCTCACGGCGGTGG
CCACCGCCGGCATCGTCTTCAGCTTCAACGGCTTCCAGAGCCCGGTGAATCTGGCTGGCGAGGCGCGTAACCCCGGCCGC
AGCATTCCGTTCGCGGTGCTGGGTTCGATCGCGCTGGCCACGGTGGTGTACGTGATCCTGCAGGTGGCCTACATCGGCGC
CGTGCCGCCGGATCTGCTGGCCAAGGCCGGCTGGCACGGTATCGATTTCCGCTCGCCGTTCGCCGAGCTGGCCATCATCG
TCAACCTGCATTGGCTGGCGATGCTGCTCTACATCGATGCGTTCGTCAGCCCCAGCGGCACCGGCATCACCTATACCGCG
ACCACTGCACGCATGGTCTACGGCATGGAAAAGAACGGCACCATGCCGGCCGTGCTGGGCAAGCTGCACCCGGTCTGGGG
CGTGCCGCGCATGGCGATGTTCTTCAACCTGGCCGTGTCGTTCGTGTTCCTGTTCTTTTTCCGCGGCTGGGGCACGCTGG
CGGCCGTGATCTCGGTGGCCACCATCATTTCCTACCTCACCGGCCCGATCAGCGCGATGGCGCTACGCCGGCACGCGCCG
GAACTGCACCGCCCGCTGCGTATCGCCGCACTGCCGGTGCTGGCCGGCGTGGCCTTCGTGATGGCCACCGAACTGCTGTA
TTGGGCACGCTGGCCGCTGACCGGCGAGATCATCCTGCTGATGGTCGTGGCGCTGCCGGTGTACTGCTATTACCAGGCCA
AGCAAGGCTGGCCGGATCTGCGCCGCAACCTCAAGGGTGCGGCCTGGATGATCTGCTACCTGCCCACCATTGCACTGGTC
TCGTGGGCCGGCAGCACCGATTTCGGTGGACATGGCTACCTCAGCTACGGCACCGATCTGGTCGTGGTCGCAGTCGTGGG
CGCGGTGTTCTACGTCTGGGGCGTGCGCAGCGGCTGGCGGACTCCCTCGGTGGAGAAGGCGGTCGCGCAGGCGTGA

Upstream 100 bases:

>100_bases
GCCCCGGTCGTGCCTGAATACGCACTGACGGCAAGCGGTCGCTTCTGCGATCATTACCGGCTTGTTGCCGGTTCACGGCG
TCCTCACTGCCAGGCTCCTC

Downstream 100 bases:

>100_bases
ATGCTCACAGGCGCTAGCCGGCGCCGACTCCCGGCAACCGGCTGGCAGTCACCGCCGGGAATAAACGAGAACGGCCGGTG
CAGTGCGCACCGGCCGTTCC

Product: amino acid-polyamine-organocation superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 531; Mature: 530

Protein sequence:

>531_residues
MSEHSLRRDVGPFALMLTGLGSIIGSGWLFGAWRAAGLAGPGAIWAWVLGAAIITTIALSYAELGAMFPESGGMVRYSHY
SHGSLVGFIAGWANWIAIVSVIPVEAEASVQYMASWPWAWAQGLYVQAPGGAGELSVPGLLISAVLVLVYFFLNFWSVKL
FARSNTLITVFKLVVPAATGVALIASGFHSENFSVGIHGDSHVLDLAAVLTAVATAGIVFSFNGFQSPVNLAGEARNPGR
SIPFAVLGSIALATVVYVILQVAYIGAVPPDLLAKAGWHGIDFRSPFAELAIIVNLHWLAMLLYIDAFVSPSGTGITYTA
TTARMVYGMEKNGTMPAVLGKLHPVWGVPRMAMFFNLAVSFVFLFFFRGWGTLAAVISVATIISYLTGPISAMALRRHAP
ELHRPLRIAALPVLAGVAFVMATELLYWARWPLTGEIILLMVVALPVYCYYQAKQGWPDLRRNLKGAAWMICYLPTIALV
SWAGSTDFGGHGYLSYGTDLVVVAVVGAVFYVWGVRSGWRTPSVEKAVAQA

Sequences:

>Translated_531_residues
MSEHSLRRDVGPFALMLTGLGSIIGSGWLFGAWRAAGLAGPGAIWAWVLGAAIITTIALSYAELGAMFPESGGMVRYSHY
SHGSLVGFIAGWANWIAIVSVIPVEAEASVQYMASWPWAWAQGLYVQAPGGAGELSVPGLLISAVLVLVYFFLNFWSVKL
FARSNTLITVFKLVVPAATGVALIASGFHSENFSVGIHGDSHVLDLAAVLTAVATAGIVFSFNGFQSPVNLAGEARNPGR
SIPFAVLGSIALATVVYVILQVAYIGAVPPDLLAKAGWHGIDFRSPFAELAIIVNLHWLAMLLYIDAFVSPSGTGITYTA
TTARMVYGMEKNGTMPAVLGKLHPVWGVPRMAMFFNLAVSFVFLFFFRGWGTLAAVISVATIISYLTGPISAMALRRHAP
ELHRPLRIAALPVLAGVAFVMATELLYWARWPLTGEIILLMVVALPVYCYYQAKQGWPDLRRNLKGAAWMICYLPTIALV
SWAGSTDFGGHGYLSYGTDLVVVAVVGAVFYVWGVRSGWRTPSVEKAVAQA
>Mature_530_residues
SEHSLRRDVGPFALMLTGLGSIIGSGWLFGAWRAAGLAGPGAIWAWVLGAAIITTIALSYAELGAMFPESGGMVRYSHYS
HGSLVGFIAGWANWIAIVSVIPVEAEASVQYMASWPWAWAQGLYVQAPGGAGELSVPGLLISAVLVLVYFFLNFWSVKLF
ARSNTLITVFKLVVPAATGVALIASGFHSENFSVGIHGDSHVLDLAAVLTAVATAGIVFSFNGFQSPVNLAGEARNPGRS
IPFAVLGSIALATVVYVILQVAYIGAVPPDLLAKAGWHGIDFRSPFAELAIIVNLHWLAMLLYIDAFVSPSGTGITYTAT
TARMVYGMEKNGTMPAVLGKLHPVWGVPRMAMFFNLAVSFVFLFFFRGWGTLAAVISVATIISYLTGPISAMALRRHAPE
LHRPLRIAALPVLAGVAFVMATELLYWARWPLTGEIILLMVVALPVYCYYQAKQGWPDLRRNLKGAAWMICYLPTIALVS
WAGSTDFGGHGYLSYGTDLVVVAVVGAVFYVWGVRSGWRTPSVEKAVAQA

Specific function: Uptake of an yet unknown amino-acid with the concomitant import of a proton [H]

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. AGT (TC 2.A.3.11) family [H]

Homologues:

Organism=Homo sapiens, GI71979932, Length=474, Percent_Identity=24.4725738396624, Blast_Score=80, Evalue=5e-15,
Organism=Homo sapiens, GI33286428, Length=490, Percent_Identity=24.6938775510204, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI187423910, Length=420, Percent_Identity=23.5714285714286, Blast_Score=69, Evalue=9e-12,
Organism=Homo sapiens, GI7657591, Length=420, Percent_Identity=23.5714285714286, Blast_Score=69, Evalue=9e-12,
Organism=Homo sapiens, GI114326544, Length=508, Percent_Identity=22.4409448818898, Blast_Score=66, Evalue=8e-11,
Organism=Homo sapiens, GI114326550, Length=508, Percent_Identity=22.4409448818898, Blast_Score=66, Evalue=8e-11,
Organism=Homo sapiens, GI7657683, Length=364, Percent_Identity=25.5494505494505, Blast_Score=66, Evalue=1e-10,
Organism=Escherichia coli, GI87082250, Length=478, Percent_Identity=24.2677824267782, Blast_Score=86, Evalue=8e-18,
Organism=Escherichia coli, GI1786789, Length=421, Percent_Identity=24.9406175771971, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1786302, Length=437, Percent_Identity=27.0022883295195, Blast_Score=72, Evalue=8e-14,
Organism=Escherichia coli, GI1790653, Length=354, Percent_Identity=23.4463276836158, Blast_Score=72, Evalue=8e-14,
Organism=Escherichia coli, GI87081869, Length=332, Percent_Identity=23.4939759036145, Blast_Score=69, Evalue=8e-13,
Organism=Escherichia coli, GI1788480, Length=364, Percent_Identity=26.9230769230769, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1786602, Length=504, Percent_Identity=23.8095238095238, Blast_Score=62, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI32566699, Length=392, Percent_Identity=25, Blast_Score=83, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI17540018, Length=441, Percent_Identity=25.8503401360544, Blast_Score=81, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17532491, Length=408, Percent_Identity=24.7549019607843, Blast_Score=81, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17531343, Length=413, Percent_Identity=24.9394673123487, Blast_Score=73, Evalue=4e-13,
Organism=Drosophila melanogaster, GI24667468, Length=419, Percent_Identity=26.491646778043, Blast_Score=101, Evalue=1e-21,
Organism=Drosophila melanogaster, GI21357367, Length=416, Percent_Identity=24.7596153846154, Blast_Score=78, Evalue=2e-14,
Organism=Drosophila melanogaster, GI221331183, Length=427, Percent_Identity=23.6533957845433, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI17647653, Length=427, Percent_Identity=23.6533957845433, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24664379, Length=427, Percent_Identity=23.6533957845433, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24651635, Length=453, Percent_Identity=25.60706401766, Blast_Score=72, Evalue=7e-13,
Organism=Drosophila melanogaster, GI24651633, Length=453, Percent_Identity=25.60706401766, Blast_Score=72, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 56878; Mature: 56747

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEHSLRRDVGPFALMLTGLGSIIGSGWLFGAWRAAGLAGPGAIWAWVLGAAIITTIALS
CCCCCHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
YAELGAMFPESGGMVRYSHYSHGSLVGFIAGWANWIAIVSVIPVEAEASVQYMASWPWAW
HHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHH
AQGLYVQAPGGAGELSVPGLLISAVLVLVYFFLNFWSVKLFARSNTLITVFKLVVPAATG
HCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHCC
VALIASGFHSENFSVGIHGDSHVLDLAAVLTAVATAGIVFSFNGFQSPVNLAGEARNPGR
HHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHEEEECCCCCCHHCCCCCCCCCC
SIPFAVLGSIALATVVYVILQVAYIGAVPPDLLAKAGWHGIDFRSPFAELAIIVNLHWLA
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
MLLYIDAFVSPSGTGITYTATTARMVYGMEKNGTMPAVLGKLHPVWGVPRMAMFFNLAVS
HHHHHHHHCCCCCCCEEEEEHHHHHHEECCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHH
FVFLFFFRGWGTLAAVISVATIISYLTGPISAMALRRHAPELHRPLRIAALPVLAGVAFV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHH
MATELLYWARWPLTGEIILLMVVALPVYCYYQAKQGWPDLRRNLKGAAWMICYLPTIALV
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHH
SWAGSTDFGGHGYLSYGTDLVVVAVVGAVFYVWGVRSGWRTPSVEKAVAQA
HCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCC
>Mature Secondary Structure 
SEHSLRRDVGPFALMLTGLGSIIGSGWLFGAWRAAGLAGPGAIWAWVLGAAIITTIALS
CCCCHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
YAELGAMFPESGGMVRYSHYSHGSLVGFIAGWANWIAIVSVIPVEAEASVQYMASWPWAW
HHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHH
AQGLYVQAPGGAGELSVPGLLISAVLVLVYFFLNFWSVKLFARSNTLITVFKLVVPAATG
HCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHCC
VALIASGFHSENFSVGIHGDSHVLDLAAVLTAVATAGIVFSFNGFQSPVNLAGEARNPGR
HHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHEEEECCCCCCHHCCCCCCCCCC
SIPFAVLGSIALATVVYVILQVAYIGAVPPDLLAKAGWHGIDFRSPFAELAIIVNLHWLA
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
MLLYIDAFVSPSGTGITYTATTARMVYGMEKNGTMPAVLGKLHPVWGVPRMAMFFNLAVS
HHHHHHHHCCCCCCCEEEEEHHHHHHEECCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHH
FVFLFFFRGWGTLAAVISVATIISYLTGPISAMALRRHAPELHRPLRIAALPVLAGVAFV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHH
MATELLYWARWPLTGEIILLMVVALPVYCYYQAKQGWPDLRRNLKGAAWMICYLPTIALV
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHH
SWAGSTDFGGHGYLSYGTDLVVVAVVGAVFYVWGVRSGWRTPSVEKAVAQA
HCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377; 12730183 [H]