| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78049391
Identifier: 78049391
GI number: 78049391
Start: 4419460
End: 4420443
Strand: Reverse
Name: 78049391
Synonym: XCV3835
Alternate gene names: NA
Gene position: 4420443-4419460 (Counterclockwise)
Preceding gene: 78049393
Following gene: 78049383
Centisome position: 85.36
GC content: 66.97
Gene sequence:
>984_bases ATGCTGGTCAGCGCTACGCTGACCTGGCGTTGCAGATGGGCTGCGTATCATTGCCGCATGTCAGCCGTCCTGCGCACTCT CACTGCCCCCGCCGCCAAACAGATCCATCGCTGGGTGCTCGACGCGTTTCCGCGTGGTCAGAGCACCATCGAATACGATC AGCCGCTGGGCGATCCCGGCATCTTCGGGCCCGACAGCATCACCTGGCGCATCCACTCCGAATTTCCGGGCATGCTGTCC GGCGGCCTGTGCGCATTGATGTTGCAGTTGTTGCATCCGCGGGCGCTGGCCGGGGTCTACGACCATTCCAACTTCCGCAC CGATTTGATCGGGCGGCTGCGGCGCACCACCAACTTCGTCGCCGGCACCACCTACGCGCCAGCCGCGGAAGCCGAACAGC TGATTGCGCGCGTGCGCAAGATCCACTCGCAGATTCGCGGCCACACTGCCGACGGCGTGCCTTACGAGGCCAACGACCCG CAGTTGCTCACTTGGGTGCACGTGACCGAGGCCTATGGGTTCTTGCAGGGATGCCGGCGTTATTGCCGCCAGGTGCCTGC TGCCATCGCCGACCGCTACTACGACGAAGCGCGACGCGTGGCCGAGGCGTTGGGCGCAGCCGATGTGCCGGCCAGCGAGG CGCAGGTGGATGCGTATTTCGCATCGGTGCTGGGAGAGTTACGCATGGACGCGCGCTCGCGCGAGGTGCTCGACATCCTC ACCAGCATCCAGCTGCCGGTGCCCGCCGCGGGTCTGTCGCGCGGGGTATTTCTCGGCGCCGGCACGGCCTTGTTGCCCGG CTGGGCCAGCGACATGCTCGGCCGCACCACCACCCAACGCGCGCAGGCGCGCGCATCGGCACGGTTGCTGCGCAGCCTGT CGCCGCTGTTCCGCACGGCCTTGCGCGACGGACTGTCTGCGCGCGCATGCAGGCGCATGCAATTGCCGCCGGCGATGTTG CTGGAGTGGCCTGACAGCGTGTAA
Upstream 100 bases:
>100_bases CCCAGATGCCAGGTCGCGTTCTTCCGGCCGCGCGGTCACGATGCCCGTCAGCATCTGGTCGCCATCGCCATCGCCATCGC CGCGCTGACGTGCCGAACGA
Downstream 100 bases:
>100_bases CGGCGGTGGGCCGGGCGGAGCGGGTGTTCTGAGGTGCGCTGGTGGCGCGATAGGCAATCGCTGGTCGTGCCGTTTTTTCG ACGGCAACCACGACGTGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MLVSATLTWRCRWAAYHCRMSAVLRTLTAPAAKQIHRWVLDAFPRGQSTIEYDQPLGDPGIFGPDSITWRIHSEFPGMLS GGLCALMLQLLHPRALAGVYDHSNFRTDLIGRLRRTTNFVAGTTYAPAAEAEQLIARVRKIHSQIRGHTADGVPYEANDP QLLTWVHVTEAYGFLQGCRRYCRQVPAAIADRYYDEARRVAEALGAADVPASEAQVDAYFASVLGELRMDARSREVLDIL TSIQLPVPAAGLSRGVFLGAGTALLPGWASDMLGRTTTQRAQARASARLLRSLSPLFRTALRDGLSARACRRMQLPPAML LEWPDSV
Sequences:
>Translated_327_residues MLVSATLTWRCRWAAYHCRMSAVLRTLTAPAAKQIHRWVLDAFPRGQSTIEYDQPLGDPGIFGPDSITWRIHSEFPGMLS GGLCALMLQLLHPRALAGVYDHSNFRTDLIGRLRRTTNFVAGTTYAPAAEAEQLIARVRKIHSQIRGHTADGVPYEANDP QLLTWVHVTEAYGFLQGCRRYCRQVPAAIADRYYDEARRVAEALGAADVPASEAQVDAYFASVLGELRMDARSREVLDIL TSIQLPVPAAGLSRGVFLGAGTALLPGWASDMLGRTTTQRAQARASARLLRSLSPLFRTALRDGLSARACRRMQLPPAML LEWPDSV >Mature_327_residues MLVSATLTWRCRWAAYHCRMSAVLRTLTAPAAKQIHRWVLDAFPRGQSTIEYDQPLGDPGIFGPDSITWRIHSEFPGMLS GGLCALMLQLLHPRALAGVYDHSNFRTDLIGRLRRTTNFVAGTTYAPAAEAEQLIARVRKIHSQIRGHTADGVPYEANDP QLLTWVHVTEAYGFLQGCRRYCRQVPAAIADRYYDEARRVAEALGAADVPASEAQVDAYFASVLGELRMDARSREVLDIL TSIQLPVPAAGLSRGVFLGAGTALLPGWASDMLGRTTTQRAQARASARLLRSLSPLFRTALRDGLSARACRRMQLPPAML LEWPDSV
Specific function: Unknown
COG id: COG3662
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36068; Mature: 36068
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVSATLTWRCRWAAYHCRMSAVLRTLTAPAAKQIHRWVLDAFPRGQSTIEYDQPLGDPG CEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC IFGPDSITWRIHSEFPGMLSGGLCALMLQLLHPRALAGVYDHSNFRTDLIGRLRRTTNFV CCCCCCEEEEECCCCCCHHHCCHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHHH AGTTYAPAAEAEQLIARVRKIHSQIRGHTADGVPYEANDPQLLTWVHVTEAYGFLQGCRR CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHH YCRQVPAAIADRYYDEARRVAEALGAADVPASEAQVDAYFASVLGELRMDARSREVLDIL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHH TSIQLPVPAAGLSRGVFLGAGTALLPGWASDMLGRTTTQRAQARASARLLRSLSPLFRTA HHCCCCCCCCHHCCCEEEECCHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH LRDGLSARACRRMQLPPAMLLEWPDSV HHHCHHHHHHHHCCCCHHHHHCCCCCC >Mature Secondary Structure MLVSATLTWRCRWAAYHCRMSAVLRTLTAPAAKQIHRWVLDAFPRGQSTIEYDQPLGDPG CEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC IFGPDSITWRIHSEFPGMLSGGLCALMLQLLHPRALAGVYDHSNFRTDLIGRLRRTTNFV CCCCCCEEEEECCCCCCHHHCCHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHHH AGTTYAPAAEAEQLIARVRKIHSQIRGHTADGVPYEANDPQLLTWVHVTEAYGFLQGCRR CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHH YCRQVPAAIADRYYDEARRVAEALGAADVPASEAQVDAYFASVLGELRMDARSREVLDIL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHH TSIQLPVPAAGLSRGVFLGAGTALLPGWASDMLGRTTTQRAQARASARLLRSLSPLFRTA HHCCCCCCCCHHCCCEEEECCHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH LRDGLSARACRRMQLPPAMLLEWPDSV HHHCHHHHHHHHCCCCHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA