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The map label for this gene is 78049394

Identifier: 78049394

GI number: 78049394

Start: 4423645

End: 4424016

Strand: Reverse

Name: 78049394

Synonym: XCV3838

Alternate gene names: NA

Gene position: 4424016-4423645 (Counterclockwise)

Preceding gene: 78049395

Following gene: 78049393

Centisome position: 85.43

GC content: 65.32

Gene sequence:

>372_bases
ATGCGCCTGATCGCCTCCCTGGTGTATTGCCTGCTTGCCCTGGCCGGCTGCCATGAACGCAATGGCACCACCTCGATCAC
CCGTGCCACCCGCGATGGCCACGATGTGATCTTCAGCAAGACGCTGATCACCGCGAGCAGTACCAGCGTGCATTGCCTGG
CCAGCGATACCGGCCATTGCTACTACCTGATCTTTGAGGAGCAGTGCGGCGCTCGCGGCAGCGGTGATGGCGCAAGCGCA
CCGACGTGTGCCCGCAAGACCTTGGACAGCTTTGTGCTGGTGCCAGGGCAGGTGCGCGAATTGCGCGGCGTTCCCGGCCA
GGCGCACACCTGCGTGGAGACCACCGCACCGCAGGCCGATTGCCGCGGCTGA

Upstream 100 bases:

>100_bases
CGCGTGAGTGCCACAGCGTTCCGATGACCGACAACCGCTGCCTGACGCGCTGCAGCCTGCTTTGATTCCCCCGTTTGCAT
CGACTGAAAGGACTGTCTCC

Downstream 100 bases:

>100_bases
GGAAGGCGCACGCACGCACCGAGCTGTGGTTGGGCGTGCGTGCGTGTGCGTAGGCCACGCGCAGAAGCCTTAGTGCCCAT
CGCGGGTGCCTGCGGGTTCC

Product: putative secreted protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MRLIASLVYCLLALAGCHERNGTTSITRATRDGHDVIFSKTLITASSTSVHCLASDTGHCYYLIFEEQCGARGSGDGASA
PTCARKTLDSFVLVPGQVRELRGVPGQAHTCVETTAPQADCRG

Sequences:

>Translated_123_residues
MRLIASLVYCLLALAGCHERNGTTSITRATRDGHDVIFSKTLITASSTSVHCLASDTGHCYYLIFEEQCGARGSGDGASA
PTCARKTLDSFVLVPGQVRELRGVPGQAHTCVETTAPQADCRG
>Mature_123_residues
MRLIASLVYCLLALAGCHERNGTTSITRATRDGHDVIFSKTLITASSTSVHCLASDTGHCYYLIFEEQCGARGSGDGASA
PTCARKTLDSFVLVPGQVRELRGVPGQAHTCVETTAPQADCRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13002; Mature: 13002

Theoretical pI: Translated: 7.37; Mature: 7.37

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.5 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
6.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLIASLVYCLLALAGCHERNGTTSITRATRDGHDVIFSKTLITASSTSVHCLASDTGHC
CHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCEEEEEEEEEEECCCEEEEEECCCCCE
YYLIFEEQCGARGSGDGASAPTCARKTLDSFVLVPGQVRELRGVPGQAHTCVETTAPQAD
EEEEECCCCCCCCCCCCCCCCHHHHHHHHCEEECCCCHHHHCCCCCCCCEEEECCCCCCC
CRG
CCC
>Mature Secondary Structure
MRLIASLVYCLLALAGCHERNGTTSITRATRDGHDVIFSKTLITASSTSVHCLASDTGHC
CHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCEEEEEEEEEEECCCEEEEEECCCCCE
YYLIFEEQCGARGSGDGASAPTCARKTLDSFVLVPGQVRELRGVPGQAHTCVETTAPQAD
EEEEECCCCCCCCCCCCCCCCHHHHHHHHCEEECCCCHHHHCCCCCCCCEEEECCCCCCC
CRG
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA