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The map label for this gene is rsmC [H]

Identifier: 78049356

GI number: 78049356

Start: 4384802

End: 4385980

Strand: Reverse

Name: rsmC [H]

Synonym: XCV3800

Alternate gene names: 78049356

Gene position: 4385980-4384802 (Counterclockwise)

Preceding gene: 78049358

Following gene: 78049355

Centisome position: 84.7

GC content: 68.28

Gene sequence:

>1179_bases
ATGCCACGCAAGCCTCCCCCTTCTGTTCCGGACAGTCAGTATGCAACCGCAGCGGGCGTCACACCGCCACCGCTCCCTTA
CAATGGCCGCCCATTTCCGCTCCGACGACCAATGGCTGGCCCGCACGACGCCCCGCTTCAAGCCCTGTTCCTGCCTTTTG
CCCAAGGCGCGCTGCCATGGCCGGAAGGACCGGTGTTGTTCCTGCGCGCGCGCGACGGTTTTCCGCTGCGCGAGCAGGCA
AGCCCCCAGACGCTGACCTGCGAGCAGAGCTTCCGTCCGTTCGCCGAAGCGCTGGAGCGCAATGGGTGGAACGTGCGCGA
AGAAAGCGAGATTGAGGCCGACAGTACGCGCTATGCCCTGGTGCTGGTGCTGCCTCCGCGGCAGCGCGAGGAGGCGCGCG
CGCTGTTCGCACGTGCGGTGGCGCTGACTGCGCCCGGTGGCCGTGTGGTGGCCTGCCAGTCCAACAACGAAGGCGCGCGC
TCGGGAGAAGCCGATCTGCGCCAGCTCACCGGGCTGGCCGGCAGCCTGACCAAGTACCACTGCCGCACCTATTGGAGCGC
GCCGCTGCCGGCCGACACCGATGCCGCGCTGCAGGCGCGCTGGGCCGCGCTGGATGCGCCACGCAAGATTCTGGACGGCC
GCTTTGTCAGCCGTCCCGGCGTCTTCGCCTGGGATCGCATCGACCCGGCGTCCGCGCTGCTGGTCGAGCATCTGCCGACC
ACGCTGGCCGGCCATGGCGCCGATCTGGGCGCGGGTTTTGGTTATCTGTCGGCCGAAGTGCTGGCGCGTTGTCCCAAGGT
CACCGCGCTGGATCTGTACGAAGCCGAGGCGCGCGCATTGACGCTGGCGCGGCGCAACCTGCAGGACATCGCGCATCCGG
CGCAGCTGCACTACCACTGGCGCGATGTCACCGCCGGGCTGGTGGCGCAATACGATTTCATCGTCAGCAACCCGCCGTTC
CATACGCCGTCGCGTGCCGACCGCCCGGACATCGGACAGCGCTTCATTGCGGTGGCCGCACAGGCACTGCGCCCGGGCGG
GCAATTGATACTGGTCGCCAACCGGCACCTACCTTACGAACAGGTGCTCAACGACAGTTTCGGACAGGTCCGCGTGGCTG
CCGAACGCGATGGGTTCAAGCTGATCGCGGCGATCCGCGGCCGCGGAGCGCGCCCATGA

Upstream 100 bases:

>100_bases
GGCAGCCTGTGGATGAGATTGAATCACGTGATCGCTATCGCATTATCACTTTGCGCTCAACACCATATTTGTTACTTATC
AGTCAAATGGAATCATCTGG

Downstream 100 bases:

>100_bases
AGCTGGTCAAACACATCGCCAATCTCGGCTACGGCAGCCGCAAGCAGGTCACCCAGCTGTTCCGGCAGGGCGCGATCACC
GATGCGCAAGGCGAGGTGCT

Product: ribosomal RNA small subunit methyltransferase C

Products: NA

Alternate protein names: 16S rRNA m2G1207 methyltransferase; rRNA (guanine-N(2)-)-methyltransferase rsmC [H]

Number of amino acids: Translated: 392; Mature: 391

Protein sequence:

>392_residues
MPRKPPPSVPDSQYATAAGVTPPPLPYNGRPFPLRRPMAGPHDAPLQALFLPFAQGALPWPEGPVLFLRARDGFPLREQA
SPQTLTCEQSFRPFAEALERNGWNVREESEIEADSTRYALVLVLPPRQREEARALFARAVALTAPGGRVVACQSNNEGAR
SGEADLRQLTGLAGSLTKYHCRTYWSAPLPADTDAALQARWAALDAPRKILDGRFVSRPGVFAWDRIDPASALLVEHLPT
TLAGHGADLGAGFGYLSAEVLARCPKVTALDLYEAEARALTLARRNLQDIAHPAQLHYHWRDVTAGLVAQYDFIVSNPPF
HTPSRADRPDIGQRFIAVAAQALRPGGQLILVANRHLPYEQVLNDSFGQVRVAAERDGFKLIAAIRGRGARP

Sequences:

>Translated_392_residues
MPRKPPPSVPDSQYATAAGVTPPPLPYNGRPFPLRRPMAGPHDAPLQALFLPFAQGALPWPEGPVLFLRARDGFPLREQA
SPQTLTCEQSFRPFAEALERNGWNVREESEIEADSTRYALVLVLPPRQREEARALFARAVALTAPGGRVVACQSNNEGAR
SGEADLRQLTGLAGSLTKYHCRTYWSAPLPADTDAALQARWAALDAPRKILDGRFVSRPGVFAWDRIDPASALLVEHLPT
TLAGHGADLGAGFGYLSAEVLARCPKVTALDLYEAEARALTLARRNLQDIAHPAQLHYHWRDVTAGLVAQYDFIVSNPPF
HTPSRADRPDIGQRFIAVAAQALRPGGQLILVANRHLPYEQVLNDSFGQVRVAAERDGFKLIAAIRGRGARP
>Mature_391_residues
PRKPPPSVPDSQYATAAGVTPPPLPYNGRPFPLRRPMAGPHDAPLQALFLPFAQGALPWPEGPVLFLRARDGFPLREQAS
PQTLTCEQSFRPFAEALERNGWNVREESEIEADSTRYALVLVLPPRQREEARALFARAVALTAPGGRVVACQSNNEGARS
GEADLRQLTGLAGSLTKYHCRTYWSAPLPADTDAALQARWAALDAPRKILDGRFVSRPGVFAWDRIDPASALLVEHLPTT
LAGHGADLGAGFGYLSAEVLARCPKVTALDLYEAEARALTLARRNLQDIAHPAQLHYHWRDVTAGLVAQYDFIVSNPPFH
TPSRADRPDIGQRFIAVAAQALRPGGQLILVANRHLPYEQVLNDSFGQVRVAAERDGFKLIAAIRGRGARP

Specific function: Specifically methylates the guanosine in position 1207 of 16S rRNA in the 30S particle [H]

COG id: COG2813

COG function: function code J; 16S RNA G1207 methylase RsmC

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmC family [H]

Homologues:

Organism=Escherichia coli, GI1790830, Length=267, Percent_Identity=29.9625468164794, Blast_Score=89, Evalue=4e-19,
Organism=Escherichia coli, GI87082206, Length=191, Percent_Identity=25.130890052356, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002052
- InterPro:   IPR013675
- InterPro:   IPR002296
- InterPro:   IPR007848 [H]

Pfam domain/function: PF05175 MTS; PF08468 MTS_N [H]

EC number: =2.1.1.172 [H]

Molecular weight: Translated: 42804; Mature: 42673

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRKPPPSVPDSQYATAAGVTPPPLPYNGRPFPLRRPMAGPHDAPLQALFLPFAQGALPW
CCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCC
PEGPVLFLRARDGFPLREQASPQTLTCEQSFRPFAEALERNGWNVREESEIEADSTRYAL
CCCCEEEEEECCCCCCHHCCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE
VLVLPPRQREEARALFARAVALTAPGGRVVACQSNNEGARSGEADLRQLTGLAGSLTKYH
EEEECCCCHHHHHHHHHHHHEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHH
CRTYWSAPLPADTDAALQARWAALDAPRKILDGRFVSRPGVFAWDRIDPASALLVEHLPT
HHHEECCCCCCCCCHHHHHHHHHHHCCHHHHCCCEECCCCCEEECCCCHHHHHHHHHCCH
TLAGHGADLGAGFGYLSAEVLARCPKVTALDLYEAEARALTLARRNLQDIAHPAQLHYHW
HHHCCCCCCCCCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHCCHHHEEEEH
RDVTAGLVAQYDFIVSNPPFHTPSRADRPDIGQRFIAVAAQALRPGGQLILVANRHLPYE
HHHHHHHHHHEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCHH
QVLNDSFGQVRVAAERDGFKLIAAIRGRGARP
HHHCCCCCEEEEEECCCCEEEEEEECCCCCCC
>Mature Secondary Structure 
PRKPPPSVPDSQYATAAGVTPPPLPYNGRPFPLRRPMAGPHDAPLQALFLPFAQGALPW
CCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCC
PEGPVLFLRARDGFPLREQASPQTLTCEQSFRPFAEALERNGWNVREESEIEADSTRYAL
CCCCEEEEEECCCCCCHHCCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE
VLVLPPRQREEARALFARAVALTAPGGRVVACQSNNEGARSGEADLRQLTGLAGSLTKYH
EEEECCCCHHHHHHHHHHHHEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHH
CRTYWSAPLPADTDAALQARWAALDAPRKILDGRFVSRPGVFAWDRIDPASALLVEHLPT
HHHEECCCCCCCCCHHHHHHHHHHHCCHHHHCCCEECCCCCEEECCCCHHHHHHHHHCCH
TLAGHGADLGAGFGYLSAEVLARCPKVTALDLYEAEARALTLARRNLQDIAHPAQLHYHW
HHHCCCCCCCCCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHCCHHHEEEEH
RDVTAGLVAQYDFIVSNPPFHTPSRADRPDIGQRFIAVAAQALRPGGQLILVANRHLPYE
HHHHHHHHHHEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCHH
QVLNDSFGQVRVAAERDGFKLIAAIRGRGARP
HHHCCCCCEEEEEECCCCEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA