| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is hisC3 [H]
Identifier: 78049094
GI number: 78049094
Start: 4052893
End: 4054095
Strand: Reverse
Name: hisC3 [H]
Synonym: XCV3538
Alternate gene names: 78049094
Gene position: 4054095-4052893 (Counterclockwise)
Preceding gene: 78049095
Following gene: 78049093
Centisome position: 78.29
GC content: 64.59
Gene sequence:
>1203_bases ATGAACACTGCTCTTTCGCGCCGCGCGTTTCTACGCGACTCCGCGTTGTTTGCCGGCGCCGCCGGTGCCGGCAGCTTGCC GCTGTTGGCCAGCGGCTTCGAACGCGCCACTGCCATCGCGCCCGCATCGGCAACGGCGCTGGCACCGGTGATGATCGACT CCAATGAATTTCCGGATGGACCGTCGGCTGCCGCAGTAAAGGCCATCGCGCAGATCGCCCCGCAAGGCGGGCGGTATTTG CGGCAGGTACAGATGGAATTGATGACCACCCTGGCTGCCGAGCTCGCGCTGCCGGTCGATCACCTGATGGCGTATGCCGG GTCCACCGAACCGCTCGACTACACGATGCTGGCATTTACTTCGCCCAGCGCCGCGTTGGTCACAGCCGACCCCACCTACG AATCCGGTTGGCGTGCGGCAACCCGCAATGGCGCGCGCCTGATCAAGGTGCCGCTGCGCAAGGACTTTTCGCACGATGTA CAGGCCATGTGCGCGGCGGACGCCAACGCGGGCGTGATCTACATCTGCAACCCCAACAATCCCACCGGTTCGGTCACCGC ACGCAAGGATCTGGACTACGCGTTGGCGCACAAGCCCAAAGGCAGCGTGTTGGTGGTGGATGAGGCGTATATCCACTTCG CGCAAAACACGCGCAGCATGGTCGACATGGTTGCTGCAGGCGAAGACGTGGTGGTGTTGCGCACCTTCTCCAAACTCTAT GGCATGGCCGGCATCCGCCTGGGCTATGCGGCCGCGCGTCCGGACCTGCTGGCCAAGCTGAAGTTCTACAGCGTCAACAG CTTGCCGGTCACCGCCGCCGCTGCCGGGCTGGCCAGCCTGCGTGATCCTGCACTGGTGCCGCAACGGCGCGCACGTACGG CCGCGACGCGCACGGATGTGATGGACTTTCTCGCCAGGCAGGGCTATGCGTGCACTGCCTCGGAGAGCAACTGCTTCATG GTGGATGTAAAGCGGCCTGCCGCCGGCTTCAAGGACGCCATGGCCACCCATGGCGTGTTCATCGGCCGCAGCTGGCCGGT GTGGCCAACCTGGTCGCGGATCACTGTGGGCACCGATGCGGAGATGGCGCGTTTCAAGCAGGCGTTCGTACAAGTGATCG CCGGTAAGCGCGGCCCGTTGCCGGTGCCGGCCATCGCGTCCGCAGCAGCAGATCCGATGGATGCGTTTTTCCGTTACGCG TGA
Upstream 100 bases:
>100_bases ATTCCAGATCGCAGCGCTGGGTAACCCGCTGTACCGGGTCGAGATCGAAGTGGTTGCCGTGCGTCCCTGAATCCGCGTTG TCATCCTGCTGGAGGTTGTC
Downstream 100 bases:
>100_bases AGCACGCATGCGGCCGAAGGTCTGCTTGCAATCAGCAGGGCGCCTGGCATCGTTGGTCGATGCGCGAGCGCATGCAGTGG GCTGGCGCGTGATGCCCTGT
Product: putative aminotransferase
Products: 3-(imidazol-4-yl)-2-oxopropyl phosphate; L-glutamate
Alternate protein names: NA
Number of amino acids: Translated: 400; Mature: 400
Protein sequence:
>400_residues MNTALSRRAFLRDSALFAGAAGAGSLPLLASGFERATAIAPASATALAPVMIDSNEFPDGPSAAAVKAIAQIAPQGGRYL RQVQMELMTTLAAELALPVDHLMAYAGSTEPLDYTMLAFTSPSAALVTADPTYESGWRAATRNGARLIKVPLRKDFSHDV QAMCAADANAGVIYICNPNNPTGSVTARKDLDYALAHKPKGSVLVVDEAYIHFAQNTRSMVDMVAAGEDVVVLRTFSKLY GMAGIRLGYAAARPDLLAKLKFYSVNSLPVTAAAAGLASLRDPALVPQRRARTAATRTDVMDFLARQGYACTASESNCFM VDVKRPAAGFKDAMATHGVFIGRSWPVWPTWSRITVGTDAEMARFKQAFVQVIAGKRGPLPVPAIASAAADPMDAFFRYA
Sequences:
>Translated_400_residues MNTALSRRAFLRDSALFAGAAGAGSLPLLASGFERATAIAPASATALAPVMIDSNEFPDGPSAAAVKAIAQIAPQGGRYL RQVQMELMTTLAAELALPVDHLMAYAGSTEPLDYTMLAFTSPSAALVTADPTYESGWRAATRNGARLIKVPLRKDFSHDV QAMCAADANAGVIYICNPNNPTGSVTARKDLDYALAHKPKGSVLVVDEAYIHFAQNTRSMVDMVAAGEDVVVLRTFSKLY GMAGIRLGYAAARPDLLAKLKFYSVNSLPVTAAAAGLASLRDPALVPQRRARTAATRTDVMDFLARQGYACTASESNCFM VDVKRPAAGFKDAMATHGVFIGRSWPVWPTWSRITVGTDAEMARFKQAFVQVIAGKRGPLPVPAIASAAADPMDAFFRYA >Mature_400_residues MNTALSRRAFLRDSALFAGAAGAGSLPLLASGFERATAIAPASATALAPVMIDSNEFPDGPSAAAVKAIAQIAPQGGRYL RQVQMELMTTLAAELALPVDHLMAYAGSTEPLDYTMLAFTSPSAALVTADPTYESGWRAATRNGARLIKVPLRKDFSHDV QAMCAADANAGVIYICNPNNPTGSVTARKDLDYALAHKPKGSVLVVDEAYIHFAQNTRSMVDMVAAGEDVVVLRTFSKLY GMAGIRLGYAAARPDLLAKLKFYSVNSLPVTAAAAGLASLRDPALVPQRRARTAATRTDVMDFLARQGYACTASESNCFM VDVKRPAAGFKDAMATHGVFIGRSWPVWPTWSRITVGTDAEMARFKQAFVQVIAGKRGPLPVPAIASAAADPMDAFFRYA
Specific function: May catalyze the transamination reaction in phenylalanine biosynthesis [H]
COG id: COG0079
COG function: function code E; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Escherichia coli, GI1788332, Length=336, Percent_Identity=26.1904761904762, Blast_Score=90, Evalue=2e-19, Organism=Saccharomyces cerevisiae, GI6322075, Length=260, Percent_Identity=27.6923076923077, Blast_Score=65, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001176 - InterPro: IPR001917 - InterPro: IPR004839 - InterPro: IPR005861 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: 2.6.1.9
Molecular weight: Translated: 42457; Mature: 42457
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTALSRRAFLRDSALFAGAAGAGSLPLLASGFERATAIAPASATALAPVMIDSNEFPDG CCCCHHHHHHHHHCHHEECCCCCCCCCHHHCCHHHHHEECCCCCHHEEEEEECCCCCCCC PSAAAVKAIAQIAPQGGRYLRQVQMELMTTLAAELALPVDHLMAYAGSTEPLDYTMLAFT CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCEEEEEEC SPSAALVTADPTYESGWRAATRNGARLIKVPLRKDFSHDVQAMCAADANAGVIYICNPNN CCCCEEEECCCCCCCCCCHHCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCEEEEECCCC PTGSVTARKDLDYALAHKPKGSVLVVDEAYIHFAQNTRSMVDMVAAGEDVVVLRTFSKLY CCCCEEECCCCCHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHH GMAGIRLGYAAARPDLLAKLKFYSVNSLPVTAAAAGLASLRDPALVPQRRARTAATRTDV CCCCCEECHHHCCCHHHHEEEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH MDFLARQGYACTASESNCFMVDVKRPAAGFKDAMATHGVFIGRSWPVWPTWSRITVGTDA HHHHHHCCCEEECCCCCEEEEEECCCCCCHHHHHHHCCEEECCCCCCCCCCCEEEECCCH EMARFKQAFVQVIAGKRGPLPVPAIASAAADPMDAFFRYA HHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCHHHHHHCCC >Mature Secondary Structure MNTALSRRAFLRDSALFAGAAGAGSLPLLASGFERATAIAPASATALAPVMIDSNEFPDG CCCCHHHHHHHHHCHHEECCCCCCCCCHHHCCHHHHHEECCCCCHHEEEEEECCCCCCCC PSAAAVKAIAQIAPQGGRYLRQVQMELMTTLAAELALPVDHLMAYAGSTEPLDYTMLAFT CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCEEEEEEC SPSAALVTADPTYESGWRAATRNGARLIKVPLRKDFSHDVQAMCAADANAGVIYICNPNN CCCCEEEECCCCCCCCCCHHCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCEEEEECCCC PTGSVTARKDLDYALAHKPKGSVLVVDEAYIHFAQNTRSMVDMVAAGEDVVVLRTFSKLY CCCCEEECCCCCHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHH GMAGIRLGYAAARPDLLAKLKFYSVNSLPVTAAAAGLASLRDPALVPQRRARTAATRTDV CCCCCEECHHHCCCHHHHEEEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH MDFLARQGYACTASESNCFMVDVKRPAAGFKDAMATHGVFIGRSWPVWPTWSRITVGTDA HHHHHHCCCEEECCCCCEEEEEECCCCCCHHHHHHHCCEEECCCCCCCCCCCEEEECCCH EMARFKQAFVQVIAGKRGPLPVPAIASAAADPMDAFFRYA HHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: Pyridoxal Phosphate. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-histidinol phosphate; 2-oxoglutarate
Specific reaction: L-histidinol phosphate + 2-oxoglutarate = 3-(imidazol-4-yl)-2-oxopropyl phosphate + L-glutamate
General reaction: Amino group transfer [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA