| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78049093
Identifier: 78049093
GI number: 78049093
Start: 4052233
End: 4052640
Strand: Reverse
Name: 78049093
Synonym: XCV3537
Alternate gene names: NA
Gene position: 4052640-4052233 (Counterclockwise)
Preceding gene: 78049094
Following gene: 78049090
Centisome position: 78.26
GC content: 61.76
Gene sequence:
>408_bases ATGGCGCCGACGGCATGGGCACGGACGTGCGCGGTGACCATCACCGGCAACGATCAAATGAAGTTCGACCAGAGCGCGAT CAAGCTAGCGCCCGAGTGCACGCAGGTGGAGCTTACGCTCAAGCATTCCGGCAAGATGGCTGCCACCGTGATGGGGCACA ACTGGGTGTTGACCAAGTCTGCCGATTTCCAGGCGGTGGCCAATGCCGGCGTACGTTCGACCATCGCCGACAGCTATCTG CCCAAGGCCGACGCACGCGTGATTGCGCACACCAAGGTCATTGGCGGCGGCGACAGCACGACGGTGAGTTTTCCCACCAG CAAATTGAGCAAGGGCGCCGACTACACGTTCTTCTGCTCGTTCCCCGGCCATTGGGCGATGATGAAGGGCACGCTGACGT TCGGGTGA
Upstream 100 bases:
>100_bases TGTTGCAACGGTGCGCCGCGTGCGATGTGCTGCACCTTCCCAACGCAGGAGTGTTCTCTTGAAGCTGTTTTCCACGATTG CTGTGTGCGCGCTGGCGCTG
Downstream 100 bases:
>100_bases TGCATGCGGGCGGCCAGTGCTGTCAGGCCTGGCCGCCACACGTGCAAACCTGCGTTGAACGCAAGATGCATGCGGACCTG GGTCAGCCAGGTCGCAGCGG
Product: putative electron transfer protein azurin I
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MAPTAWARTCAVTITGNDQMKFDQSAIKLAPECTQVELTLKHSGKMAATVMGHNWVLTKSADFQAVANAGVRSTIADSYL PKADARVIAHTKVIGGGDSTTVSFPTSKLSKGADYTFFCSFPGHWAMMKGTLTFG
Sequences:
>Translated_135_residues MAPTAWARTCAVTITGNDQMKFDQSAIKLAPECTQVELTLKHSGKMAATVMGHNWVLTKSADFQAVANAGVRSTIADSYL PKADARVIAHTKVIGGGDSTTVSFPTSKLSKGADYTFFCSFPGHWAMMKGTLTFG >Mature_134_residues APTAWARTCAVTITGNDQMKFDQSAIKLAPECTQVELTLKHSGKMAATVMGHNWVLTKSADFQAVANAGVRSTIADSYLP KADARVIAHTKVIGGGDSTTVSFPTSKLSKGADYTFFCSFPGHWAMMKGTLTFG
Specific function: Unknown
COG id: COG3241
COG function: function code C; Azurin
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 plastocyanin-like domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014068 - InterPro: IPR000923 - InterPro: IPR008972 [H]
Pfam domain/function: PF00127 Copper-bind [H]
EC number: NA
Molecular weight: Translated: 14379; Mature: 14247
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: PS00196 COPPER_BLUE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPTAWARTCAVTITGNDQMKFDQSAIKLAPECTQVELTLKHSGKMAATVMGHNWVLTKS CCCCCCCEEEEEEEECCCCEEECCHHEEECCCCEEEEEEEECCCCEEEEEECCCEEEEEC ADFQAVANAGVRSTIADSYLPKADARVIAHTKVIGGGDSTTVSFPTSKLSKGADYTFFCS CCCHHHHCCCCHHHHHHHCCCCCCCEEEEEEEEEECCCCCEEECCHHHHCCCCCEEEEEC FPGHWAMMKGTLTFG CCCCEEEEEEEEECC >Mature Secondary Structure APTAWARTCAVTITGNDQMKFDQSAIKLAPECTQVELTLKHSGKMAATVMGHNWVLTKS CCCCCCEEEEEEEECCCCEEECCHHEEECCCCEEEEEEEECCCCEEEEEECCCEEEEEC ADFQAVANAGVRSTIADSYLPKADARVIAHTKVIGGGDSTTVSFPTSKLSKGADYTFFCS CCCHHHHCCCCHHHHHHHCCCCCCCEEEEEEEEEECCCCCEEECCHHHHCCCCCEEEEEC FPGHWAMMKGTLTFG CCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12910271 [H]