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The map label for this gene is hrpA [H]

Identifier: 78048809

GI number: 78048809

Start: 3717752

End: 3721873

Strand: Reverse

Name: hrpA [H]

Synonym: XCV3253

Alternate gene names: 78048809

Gene position: 3721873-3717752 (Counterclockwise)

Preceding gene: 78048815

Following gene: 78048800

Centisome position: 71.87

GC content: 66.96

Gene sequence:

>4122_bases
ATGAGCGCTATCGACTCCACCCTTGCCGACACCTTGCGTGAACGCCGCCGTGCCGTGGATGGTGCGATGAGCCGCGACCG
TGGCCGCTTGCTGGGCCTATGGTCGCGCTGGCAGGGCAAGCCGGGCAACCCGCAGGTGCGCGATGCGTTCGAGCAGGCGC
TGGCGGCATCGCAGGCGCAACGCCAGGCGCGGGCCGAGCAGCAGCCGGCCATCACGCTGGACGACCAGTTGCCGATCGCA
CGCGAGGCCGAGCGCATCATCGCGCTGATCCGGAACCATCAGGTGGTGGTCATCGCCGGCGAAACCGGCTCGGGCAAGAC
CACCCAGCTGCCCAAGCTGTGCCTGGCGGCCGGACGCGGAGCCGCCGGGATGATCGGCTGCACCCAACCACGCCGGATCG
CCGCGCGTGCAGTGGCCGCGCGCGTGGCCGACGAGCTGAAGACGCCATTGGGCACGACGGTGGGCTTCCAGGTGCGCTTC
ACCGATCGCGTCAGCGATCAGTCGCGCATCAAGTTCATGACCGACGGCATCCTGCTGGCGGAAATCGCCAGCGACCGTTG
GCTGTCGTCCTACGACACCATCATCGTGGACGAGGCGCACGAGCGCAGCCTCAACATCGATTTCCTGCTCGGCTATCTCA
AGCAGTTGCTGCGCAAGCGCTCCGATCTCAAGTTGATCGTCACCTCGGCCACCATCGATACCGAGCGCTTTGCACGGCAC
TTCGACGATGCGCCGGTGATCAGCGTGGAAGGCCGCACCTTCCCGGTCGAGGTGCGTTATCGCCCGCTGGAAGGCGATAC
GGGCGACAGCGACGATGGCGAACACGGCAGCGGCCGCGACGGCGAGCGCAGTGTCAACGATGCGATCGTGGCGGCCATCG
ACGAAATTACCCGCATCGACCCGCGCGGCGATGTGCTGATGTTCCTGCCGGGCGAGCGCGAGATTCGCGATGCGCACCAG
TCGCTGGAACGGCGCAAATACCGCGAAACCGAAGTGGTGCCGCTGTACGCGCGGCTGTCGGCGGCCGATCAGGACCGCGT
GTTCAACCCGGGCCCGCGGCGGCGCCTGGTACTGGCCACCAACGTGGCCGAGACCTCGCTGACGGTACCGCGCATCCGCT
ATGTGGTGGATCCGGGGCTTGCCCGCGTCAAGCGCTACAGCCCGCGCCAGAAGCTGGACCGGCTGCATATCGAGCCGATC
TCGCAGGCCAGCGCCAACCAGCGCATGGGCCGTTGCGGGCGCATTGCAGAGGGTATCTGCTACCGGCTGTATGCCGAAGC
GGACTTTGCCGCGCGTCCGGCGTTCACCGATCCGGAAATCCGACGTTCCTCGTTGTCCGGGGTGATCTTGCGCATGCTGC
AGTTGGGGCTGGGCAGGATCGAAGACTTCCCGTTCCTGGAGGCACCCGACGAACGTGCGTTGGCTGATGGCTGGCAACAG
CTGCTGGAGCTGGGCGCCATCGATGCGCAGCGGCGTCTGACCGCCACCGGGCGCCAGATGGCGCGCCTGCCAGTGGACGT
CAAGCTGGCGCGCATGCTGGTGGCCGCGCAGCAACATGGGTGCCTGCGCGAGATGATCATCATCGCCGCATTCCTGGGCA
TCCAGGATCCGCGCGAGCGCCCGCCGGAAGCGCGCGAGGCCGCCGATAACGCGCATGCGCTGTTTGCCGACGCGCGCTCT
GAATTCGTCGGCATCCTGCGCTTGTGGGATGCGTACCGGCAGGTGCATGAAGATCTCACCCAATCCAAGCTGCGCGACTG
GTGCAACCGGCATTTCCTCGGTTTCCTGCGCATGCGCGAGTGGCGCGAGCTGCACCGGCAGCTGCGGTTGCTGTGCGAAG
AACTGGGTTGGAGCGAAGAGCCGGCCAATGTGATGCTGGCGCCGTTGTTGGCCGGTGCCAGCGCGCCCGCCCGCGAGGAC
GGCCACAGCGTCAACCGGCCCACGCGTGGCCAACTGCACCGTGCTGCGCGGCTGGCGCGCGAAGGCAAGCCGGATCCGAA
CGCGGCGCCTGTGCAACCTGCGCCTGCTGCGACGAACAAGCAGGCCGAGGCTGCCGAAGCCTCGGCGCGGACCACCGAGC
GCGAGCGTGCGGCGGCGTATCAGGCGCTGCATCGCGCGCTGCTGGCGGGCCTGCCGACGCAGATCGGTCATCGCACCGAA
AAAGGCGACTATCTGGCTGCGCGGCAACGCCGCTTCGTGCCGTTTCCGGGTTCCGCATTGGCGCGCAAACCGCCGCCGTG
GATTCTGGCGGCCACGCTGCTGGACACGCAGAAAGTGTGGGGCATGACCAATGCCGCGATCGAGCCGGATTGGGCGATTG
CCGAGCTGCCGCATCTGCTGGCGCGCAAGCATTTCGATGCGCACTGGTCGCGTGCGCAGGGGCAGGTGGTCGCTTCGGAA
CAGATCAGCCTGTTCGGGCTGGTGCTGGCGCCGAAAAAGCCCGTGCATTTCGGCAAGATCGATCCGGCCGCAGCGCATGA
CCTGTTCGTGCGCCAAGGCCTGGTGACGGGCGAAATCAATACGCGGGCCGCATTCGTGGCCGACAATCTCAAGGTGCTCG
AGCAGGCGCGCGAAGAAGAGGCCAAGCTGCGTCGTGCCGGTATCGTTGCCGACGAAGGCTGGCAGGCGCGCTGGTATCTG
GATCGCATTCCGGCCGAGCTGCATTCGGCCAGCGGCCTGGATGCGTGGTGGAAGACCTTGCCGCCGGACAAGCGCCGCAG
CCTGCATTGGTCGTTGAACGATCTGCTGCCGGGCGAAGGCAGCGAAGCCGATCGCTTTCCGAAATATTTCCCGCTCGGCG
ATGCGCGCCTGCCGTTGCATTACCGCTTCGAGCCGGGGGCCATCGACGACGGCGTGACGCTGGAGGTGCCGTTGCACCTG
CTCAATGCGCTGGATCCGGCGCGCCTGTCGTGGCTGGCGCCGGGCTTCGTCGCCGACAAGGCGTCTGCGTTGATTCGTAG
CCTGCCCAAGGCGCAACGCCGCAACTATGTGCCGGCACCGGATTTCGGACGTGCGTTCTACGAGGCATTTAGCATTGCCT
CGGCCGACGATATCCGCGGCGAACTGGCGCGCTTTCTGACCAAGGCCACCGGGACGCAGGTGACGGCACTGGATTTCGAT
GAGCAGGCGCTGGACACGCATTTGCTGATGAACCTGCGCCTGCGCGATGACGACGGCAAGGTGCTGGCCGAGTCGCGCGA
TCTGGACGGGCTGCGTGCGCGCTTCGGCGAGCGCGCGGGGCAGGCATTCGCCGCACGGGCCGGGCGCGCGCTGGCCGCCG
AAGGCCTGCGCGACTTTCCGAGTGCGCCGATTCCCGAACAGGTGGCCGGCGAGGCCGGCGTGCCGGCATACCCGGCGCTG
GTGGATCAAGGCGACAATGCGGCGCTGCATATCTTTGCAGACCGCAACGACGCTGCGCGGGCGCATCCGCGCGGCGTGCG
GCGCTTGCTGGAAATCGCATTGGCCGACAAGATCAAGCAGGCGCGCAAGCAACTGCCGGTGTCGCCCAAGACCGGTCTGC
TGTATGCGGCGATTGAATCGCAGGAACGCCTGCGTGGCGATCTGGTCGATGCGGCGCTCAATGCCGTGCTGGCCGATGGC
CTGGGCGCCATTCGCGACCCCGGCGCGTTTGCGCAGCGCCGCGACGATGCGGGCAAGCGGCTGTTCGGCGAAGCGATGGA
GCGTTTGAAGTTGGCCGAAAGCATCCTGGGCGCCGTGGCCGAACTCAAGCCACTGCTGGAAGCACCGTTGATGGGCTGGG
CACGCGGCAACCTGGATGACATGGAGCAGCAACTGCGCGCGCTGGTGCATGCAGGCTTCCTGCGCGACACGCCGGCCGAT
GCATTGGCCAATTATCCGCGCTACCTCAGGGCGATGATCCTGCGTACCGAGCGCGCAAAGCGCGATCCTGCGCGCGACCA
GGCGCGCATGCTCGAGCTCAAACCGTTCGTGGATGCAGTGGAAGCCGCCGCTGCGCACGGTTTGCAAGACCGCCAAGAGT
GGCAGGCGCTGCGTTGGGATCTGGAAGAACTGCGCGTGTCGGTCTTTGCGCAGGAGCTGGGTGCCAAATCCGGCGTTTCG
GCGAAGAAACTGTCGCAACGGGTCGCTGCACTGCGCAGTTGA

Upstream 100 bases:

>100_bases
GATGGTCCTTGCAGGGTGGATGTCTTGGGGAACTGATATGGCGTCACAATAGACAGGCTAAAGGATCAAACGTCATTCAA
TTTTTCACATTTTTCCATCA

Downstream 100 bases:

>100_bases
GCCTTCGGTCGGGCATGTATCCGAACAAAGCCGCGTGCGTCTTTATAAGGCACGCGGCGTGCGCCTCCGATGCTGAGAAC
GGCCCGTATATCGTCGCGAG

Product: ATP-dependent RNA helicase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 1373; Mature: 1372

Protein sequence:

>1373_residues
MSAIDSTLADTLRERRRAVDGAMSRDRGRLLGLWSRWQGKPGNPQVRDAFEQALAASQAQRQARAEQQPAITLDDQLPIA
REAERIIALIRNHQVVVIAGETGSGKTTQLPKLCLAAGRGAAGMIGCTQPRRIAARAVAARVADELKTPLGTTVGFQVRF
TDRVSDQSRIKFMTDGILLAEIASDRWLSSYDTIIVDEAHERSLNIDFLLGYLKQLLRKRSDLKLIVTSATIDTERFARH
FDDAPVISVEGRTFPVEVRYRPLEGDTGDSDDGEHGSGRDGERSVNDAIVAAIDEITRIDPRGDVLMFLPGEREIRDAHQ
SLERRKYRETEVVPLYARLSAADQDRVFNPGPRRRLVLATNVAETSLTVPRIRYVVDPGLARVKRYSPRQKLDRLHIEPI
SQASANQRMGRCGRIAEGICYRLYAEADFAARPAFTDPEIRRSSLSGVILRMLQLGLGRIEDFPFLEAPDERALADGWQQ
LLELGAIDAQRRLTATGRQMARLPVDVKLARMLVAAQQHGCLREMIIIAAFLGIQDPRERPPEAREAADNAHALFADARS
EFVGILRLWDAYRQVHEDLTQSKLRDWCNRHFLGFLRMREWRELHRQLRLLCEELGWSEEPANVMLAPLLAGASAPARED
GHSVNRPTRGQLHRAARLAREGKPDPNAAPVQPAPAATNKQAEAAEASARTTERERAAAYQALHRALLAGLPTQIGHRTE
KGDYLAARQRRFVPFPGSALARKPPPWILAATLLDTQKVWGMTNAAIEPDWAIAELPHLLARKHFDAHWSRAQGQVVASE
QISLFGLVLAPKKPVHFGKIDPAAAHDLFVRQGLVTGEINTRAAFVADNLKVLEQAREEEAKLRRAGIVADEGWQARWYL
DRIPAELHSASGLDAWWKTLPPDKRRSLHWSLNDLLPGEGSEADRFPKYFPLGDARLPLHYRFEPGAIDDGVTLEVPLHL
LNALDPARLSWLAPGFVADKASALIRSLPKAQRRNYVPAPDFGRAFYEAFSIASADDIRGELARFLTKATGTQVTALDFD
EQALDTHLLMNLRLRDDDGKVLAESRDLDGLRARFGERAGQAFAARAGRALAAEGLRDFPSAPIPEQVAGEAGVPAYPAL
VDQGDNAALHIFADRNDAARAHPRGVRRLLEIALADKIKQARKQLPVSPKTGLLYAAIESQERLRGDLVDAALNAVLADG
LGAIRDPGAFAQRRDDAGKRLFGEAMERLKLAESILGAVAELKPLLEAPLMGWARGNLDDMEQQLRALVHAGFLRDTPAD
ALANYPRYLRAMILRTERAKRDPARDQARMLELKPFVDAVEAAAAHGLQDRQEWQALRWDLEELRVSVFAQELGAKSGVS
AKKLSQRVAALRS

Sequences:

>Translated_1373_residues
MSAIDSTLADTLRERRRAVDGAMSRDRGRLLGLWSRWQGKPGNPQVRDAFEQALAASQAQRQARAEQQPAITLDDQLPIA
REAERIIALIRNHQVVVIAGETGSGKTTQLPKLCLAAGRGAAGMIGCTQPRRIAARAVAARVADELKTPLGTTVGFQVRF
TDRVSDQSRIKFMTDGILLAEIASDRWLSSYDTIIVDEAHERSLNIDFLLGYLKQLLRKRSDLKLIVTSATIDTERFARH
FDDAPVISVEGRTFPVEVRYRPLEGDTGDSDDGEHGSGRDGERSVNDAIVAAIDEITRIDPRGDVLMFLPGEREIRDAHQ
SLERRKYRETEVVPLYARLSAADQDRVFNPGPRRRLVLATNVAETSLTVPRIRYVVDPGLARVKRYSPRQKLDRLHIEPI
SQASANQRMGRCGRIAEGICYRLYAEADFAARPAFTDPEIRRSSLSGVILRMLQLGLGRIEDFPFLEAPDERALADGWQQ
LLELGAIDAQRRLTATGRQMARLPVDVKLARMLVAAQQHGCLREMIIIAAFLGIQDPRERPPEAREAADNAHALFADARS
EFVGILRLWDAYRQVHEDLTQSKLRDWCNRHFLGFLRMREWRELHRQLRLLCEELGWSEEPANVMLAPLLAGASAPARED
GHSVNRPTRGQLHRAARLAREGKPDPNAAPVQPAPAATNKQAEAAEASARTTERERAAAYQALHRALLAGLPTQIGHRTE
KGDYLAARQRRFVPFPGSALARKPPPWILAATLLDTQKVWGMTNAAIEPDWAIAELPHLLARKHFDAHWSRAQGQVVASE
QISLFGLVLAPKKPVHFGKIDPAAAHDLFVRQGLVTGEINTRAAFVADNLKVLEQAREEEAKLRRAGIVADEGWQARWYL
DRIPAELHSASGLDAWWKTLPPDKRRSLHWSLNDLLPGEGSEADRFPKYFPLGDARLPLHYRFEPGAIDDGVTLEVPLHL
LNALDPARLSWLAPGFVADKASALIRSLPKAQRRNYVPAPDFGRAFYEAFSIASADDIRGELARFLTKATGTQVTALDFD
EQALDTHLLMNLRLRDDDGKVLAESRDLDGLRARFGERAGQAFAARAGRALAAEGLRDFPSAPIPEQVAGEAGVPAYPAL
VDQGDNAALHIFADRNDAARAHPRGVRRLLEIALADKIKQARKQLPVSPKTGLLYAAIESQERLRGDLVDAALNAVLADG
LGAIRDPGAFAQRRDDAGKRLFGEAMERLKLAESILGAVAELKPLLEAPLMGWARGNLDDMEQQLRALVHAGFLRDTPAD
ALANYPRYLRAMILRTERAKRDPARDQARMLELKPFVDAVEAAAAHGLQDRQEWQALRWDLEELRVSVFAQELGAKSGVS
AKKLSQRVAALRS
>Mature_1372_residues
SAIDSTLADTLRERRRAVDGAMSRDRGRLLGLWSRWQGKPGNPQVRDAFEQALAASQAQRQARAEQQPAITLDDQLPIAR
EAERIIALIRNHQVVVIAGETGSGKTTQLPKLCLAAGRGAAGMIGCTQPRRIAARAVAARVADELKTPLGTTVGFQVRFT
DRVSDQSRIKFMTDGILLAEIASDRWLSSYDTIIVDEAHERSLNIDFLLGYLKQLLRKRSDLKLIVTSATIDTERFARHF
DDAPVISVEGRTFPVEVRYRPLEGDTGDSDDGEHGSGRDGERSVNDAIVAAIDEITRIDPRGDVLMFLPGEREIRDAHQS
LERRKYRETEVVPLYARLSAADQDRVFNPGPRRRLVLATNVAETSLTVPRIRYVVDPGLARVKRYSPRQKLDRLHIEPIS
QASANQRMGRCGRIAEGICYRLYAEADFAARPAFTDPEIRRSSLSGVILRMLQLGLGRIEDFPFLEAPDERALADGWQQL
LELGAIDAQRRLTATGRQMARLPVDVKLARMLVAAQQHGCLREMIIIAAFLGIQDPRERPPEAREAADNAHALFADARSE
FVGILRLWDAYRQVHEDLTQSKLRDWCNRHFLGFLRMREWRELHRQLRLLCEELGWSEEPANVMLAPLLAGASAPAREDG
HSVNRPTRGQLHRAARLAREGKPDPNAAPVQPAPAATNKQAEAAEASARTTERERAAAYQALHRALLAGLPTQIGHRTEK
GDYLAARQRRFVPFPGSALARKPPPWILAATLLDTQKVWGMTNAAIEPDWAIAELPHLLARKHFDAHWSRAQGQVVASEQ
ISLFGLVLAPKKPVHFGKIDPAAAHDLFVRQGLVTGEINTRAAFVADNLKVLEQAREEEAKLRRAGIVADEGWQARWYLD
RIPAELHSASGLDAWWKTLPPDKRRSLHWSLNDLLPGEGSEADRFPKYFPLGDARLPLHYRFEPGAIDDGVTLEVPLHLL
NALDPARLSWLAPGFVADKASALIRSLPKAQRRNYVPAPDFGRAFYEAFSIASADDIRGELARFLTKATGTQVTALDFDE
QALDTHLLMNLRLRDDDGKVLAESRDLDGLRARFGERAGQAFAARAGRALAAEGLRDFPSAPIPEQVAGEAGVPAYPALV
DQGDNAALHIFADRNDAARAHPRGVRRLLEIALADKIKQARKQLPVSPKTGLLYAAIESQERLRGDLVDAALNAVLADGL
GAIRDPGAFAQRRDDAGKRLFGEAMERLKLAESILGAVAELKPLLEAPLMGWARGNLDDMEQQLRALVHAGFLRDTPADA
LANYPRYLRAMILRTERAKRDPARDQARMLELKPFVDAVEAAAAHGLQDRQEWQALRWDLEELRVSVFAQELGAKSGVSA
KKLSQRVAALRS

Specific function: Not yet known [H]

COG id: COG1643

COG function: function code L; HrpA-like helicases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI255982614, Length=570, Percent_Identity=40.7017543859649, Blast_Score=397, Evalue=1e-110,
Organism=Homo sapiens, GI256000749, Length=570, Percent_Identity=40.7017543859649, Blast_Score=397, Evalue=1e-110,
Organism=Homo sapiens, GI4826690, Length=544, Percent_Identity=37.6838235294118, Blast_Score=389, Evalue=1e-108,
Organism=Homo sapiens, GI68509926, Length=555, Percent_Identity=37.8378378378378, Blast_Score=377, Evalue=1e-104,
Organism=Homo sapiens, GI38158022, Length=594, Percent_Identity=39.5622895622896, Blast_Score=375, Evalue=1e-103,
Organism=Homo sapiens, GI17999539, Length=544, Percent_Identity=38.2352941176471, Blast_Score=375, Evalue=1e-103,
Organism=Homo sapiens, GI20544129, Length=605, Percent_Identity=35.702479338843, Blast_Score=355, Evalue=1e-97,
Organism=Homo sapiens, GI20336302, Length=561, Percent_Identity=34.9376114081996, Blast_Score=345, Evalue=1e-94,
Organism=Homo sapiens, GI261878478, Length=559, Percent_Identity=35.4203935599284, Blast_Score=324, Evalue=4e-88,
Organism=Homo sapiens, GI299829255, Length=522, Percent_Identity=36.3984674329502, Blast_Score=315, Evalue=1e-85,
Organism=Homo sapiens, GI167830433, Length=584, Percent_Identity=32.3630136986301, Blast_Score=277, Evalue=4e-74,
Organism=Homo sapiens, GI167830436, Length=581, Percent_Identity=32.1858864027539, Blast_Score=268, Evalue=2e-71,
Organism=Homo sapiens, GI20336294, Length=617, Percent_Identity=32.2528363047002, Blast_Score=266, Evalue=9e-71,
Organism=Homo sapiens, GI20336290, Length=617, Percent_Identity=32.2528363047002, Blast_Score=266, Evalue=1e-70,
Organism=Homo sapiens, GI166851804, Length=589, Percent_Identity=32.427843803056, Blast_Score=243, Evalue=1e-63,
Organism=Homo sapiens, GI261878481, Length=510, Percent_Identity=31.5686274509804, Blast_Score=230, Evalue=6e-60,
Organism=Homo sapiens, GI100913206, Length=596, Percent_Identity=29.5302013422819, Blast_Score=226, Evalue=1e-58,
Organism=Homo sapiens, GI20336300, Length=547, Percent_Identity=27.0566727605119, Blast_Score=203, Evalue=8e-52,
Organism=Homo sapiens, GI163914394, Length=516, Percent_Identity=29.4573643410853, Blast_Score=179, Evalue=2e-44,
Organism=Homo sapiens, GI67782362, Length=223, Percent_Identity=40.3587443946188, Blast_Score=175, Evalue=3e-43,
Organism=Homo sapiens, GI29029601, Length=252, Percent_Identity=38.0952380952381, Blast_Score=166, Evalue=1e-40,
Organism=Homo sapiens, GI269847874, Length=184, Percent_Identity=46.7391304347826, Blast_Score=164, Evalue=8e-40,
Organism=Homo sapiens, GI39777586, Length=201, Percent_Identity=43.2835820895522, Blast_Score=160, Evalue=9e-39,
Organism=Escherichia coli, GI145693127, Length=617, Percent_Identity=53.6466774716369, Blast_Score=644, Evalue=0.0,
Organism=Escherichia coli, GI87081693, Length=445, Percent_Identity=38.6516853932584, Blast_Score=251, Evalue=3e-67,
Organism=Caenorhabditis elegans, GI17535281, Length=586, Percent_Identity=37.3720136518771, Blast_Score=390, Evalue=1e-108,
Organism=Caenorhabditis elegans, GI17554326, Length=551, Percent_Identity=39.3829401088929, Blast_Score=386, Evalue=1e-107,
Organism=Caenorhabditis elegans, GI17531507, Length=552, Percent_Identity=37.5, Blast_Score=375, Evalue=1e-103,
Organism=Caenorhabditis elegans, GI25144243, Length=557, Percent_Identity=36.0861759425494, Blast_Score=372, Evalue=1e-103,
Organism=Caenorhabditis elegans, GI32565154, Length=557, Percent_Identity=36.0861759425494, Blast_Score=372, Evalue=1e-102,
Organism=Caenorhabditis elegans, GI17556386, Length=572, Percent_Identity=36.013986013986, Blast_Score=342, Evalue=1e-93,
Organism=Caenorhabditis elegans, GI71996313, Length=624, Percent_Identity=36.5384615384615, Blast_Score=318, Evalue=1e-86,
Organism=Caenorhabditis elegans, GI71990212, Length=475, Percent_Identity=36.4210526315789, Blast_Score=295, Evalue=8e-80,
Organism=Caenorhabditis elegans, GI86562256, Length=604, Percent_Identity=28.1456953642384, Blast_Score=203, Evalue=5e-52,
Organism=Caenorhabditis elegans, GI17552054, Length=263, Percent_Identity=36.8821292775665, Blast_Score=155, Evalue=1e-37,
Organism=Caenorhabditis elegans, GI17507503, Length=192, Percent_Identity=41.1458333333333, Blast_Score=142, Evalue=9e-34,
Organism=Saccharomyces cerevisiae, GI6321318, Length=554, Percent_Identity=37.3646209386282, Blast_Score=383, Evalue=1e-106,
Organism=Saccharomyces cerevisiae, GI6320850, Length=552, Percent_Identity=35.8695652173913, Blast_Score=364, Evalue=1e-101,
Organism=Saccharomyces cerevisiae, GI6322939, Length=563, Percent_Identity=38.0106571936057, Blast_Score=363, Evalue=1e-100,
Organism=Saccharomyces cerevisiae, GI6324338, Length=565, Percent_Identity=35.2212389380531, Blast_Score=343, Evalue=8e-95,
Organism=Saccharomyces cerevisiae, GI6322772, Length=570, Percent_Identity=35.9649122807018, Blast_Score=343, Evalue=1e-94,
Organism=Saccharomyces cerevisiae, GI6323451, Length=611, Percent_Identity=28.1505728314239, Blast_Score=237, Evalue=8e-63,
Organism=Saccharomyces cerevisiae, GI6323776, Length=261, Percent_Identity=38.6973180076628, Blast_Score=168, Evalue=5e-42,
Organism=Drosophila melanogaster, GI19921728, Length=550, Percent_Identity=38.9090909090909, Blast_Score=392, Evalue=1e-109,
Organism=Drosophila melanogaster, GI19921526, Length=569, Percent_Identity=38.4885764499121, Blast_Score=390, Evalue=1e-108,
Organism=Drosophila melanogaster, GI18859729, Length=541, Percent_Identity=39.9260628465804, Blast_Score=386, Evalue=1e-107,
Organism=Drosophila melanogaster, GI20129977, Length=551, Percent_Identity=37.7495462794918, Blast_Score=370, Evalue=1e-102,
Organism=Drosophila melanogaster, GI19920696, Length=552, Percent_Identity=38.0434782608696, Blast_Score=361, Evalue=2e-99,
Organism=Drosophila melanogaster, GI45550174, Length=651, Percent_Identity=34.4086021505376, Blast_Score=340, Evalue=4e-93,
Organism=Drosophila melanogaster, GI24643238, Length=560, Percent_Identity=34.2857142857143, Blast_Score=309, Evalue=1e-83,
Organism=Drosophila melanogaster, GI24642763, Length=552, Percent_Identity=33.3333333333333, Blast_Score=276, Evalue=7e-74,
Organism=Drosophila melanogaster, GI24585491, Length=625, Percent_Identity=29.92, Blast_Score=263, Evalue=8e-70,
Organism=Drosophila melanogaster, GI17136508, Length=626, Percent_Identity=32.2683706070287, Blast_Score=237, Evalue=4e-62,
Organism=Drosophila melanogaster, GI17136342, Length=618, Percent_Identity=29.6116504854369, Blast_Score=234, Evalue=4e-61,
Organism=Drosophila melanogaster, GI24585920, Length=586, Percent_Identity=30.5460750853242, Blast_Score=233, Evalue=6e-61,
Organism=Drosophila melanogaster, GI24641942, Length=386, Percent_Identity=34.1968911917098, Blast_Score=223, Evalue=9e-58,
Organism=Drosophila melanogaster, GI17136242, Length=259, Percent_Identity=37.8378378378378, Blast_Score=168, Evalue=2e-41,
Organism=Drosophila melanogaster, GI24641139, Length=348, Percent_Identity=31.0344827586207, Blast_Score=158, Evalue=2e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR011709
- InterPro:   IPR007502
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR010222 [H]

Pfam domain/function: PF00270 DEAD; PF07717 DUF1605; PF04408 HA2; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 152310; Mature: 152179

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAIDSTLADTLRERRRAVDGAMSRDRGRLLGLWSRWQGKPGNPQVRDAFEQALAASQAQ
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHH
RQARAEQQPAITLDDQLPIAREAERIIALIRNHQVVVIAGETGSGKTTQLPKLCLAAGRG
HHHHHHCCCCEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHCCCC
AAGMIGCTQPRRIAARAVAARVADELKTPLGTTVGFQVRFTDRVSDQSRIKFMTDGILLA
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHEEHHHCCCCEE
EIASDRWLSSYDTIIVDEAHERSLNIDFLLGYLKQLLRKRSDLKLIVTSATIDTERFARH
HHHHCCHHCCCCEEEEECHHCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHH
FDDAPVISVEGRTFPVEVRYRPLEGDTGDSDDGEHGSGRDGERSVNDAIVAAIDEITRID
CCCCCEEEECCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
PRGDVLMFLPGEREIRDAHQSLERRKYRETEVVPLYARLSAADQDRVFNPGPRRRLVLAT
CCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCEEHHHHHCCCCCCCCCCCCCCCEEEEEE
NVAETSLTVPRIRYVVDPGLARVKRYSPRQKLDRLHIEPISQASANQRMGRCGRIAEGIC
CCCHHCCCCHHHHHHCCCHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
YRLYAEADFAARPAFTDPEIRRSSLSGVILRMLQLGLGRIEDFPFLEAPDERALADGWQQ
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH
LLELGAIDAQRRLTATGRQMARLPVDVKLARMLVAAQQHGCLREMIIIAAFLGIQDPRER
HHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCC
PPEAREAADNAHALFADARSEFVGILRLWDAYRQVHEDLTQSKLRDWCNRHFLGFLRMRE
CCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WRELHRQLRLLCEELGWSEEPANVMLAPLLAGASAPAREDGHSVNRPTRGQLHRAARLAR
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
EGKPDPNAAPVQPAPAATNKQAEAAEASARTTERERAAAYQALHRALLAGLPTQIGHRTE
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCC
KGDYLAARQRRFVPFPGSALARKPPPWILAATLLDTQKVWGMTNAAIEPDWAIAELPHLL
CCCHHHHHCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
ARKHFDAHWSRAQGQVVASEQISLFGLVLAPKKPVHFGKIDPAAAHDLFVRQGLVTGEIN
HHHHHHHHHHHCCCCEEECCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCEECCCC
TRAAFVADNLKVLEQAREEEAKLRRAGIVADEGWQARWYLDRIPAELHSASGLDAWWKTL
CCHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCEEHHHHHCCHHHHCCCCCHHHHHCC
PPDKRRSLHWSLNDLLPGEGSEADRFPKYFPLGDARLPLHYRFEPGAIDDGVTLEVPLHL
CCCCCCCEEEEHHHCCCCCCCCHHCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEHHHHH
LNALDPARLSWLAPGFVADKASALIRSLPKAQRRNYVPAPDFGRAFYEAFSIASADDIRG
HCCCCHHHHHHCCCCHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHH
ELARFLTKATGTQVTALDFDEQALDTHLLMNLRLRDDDGKVLAESRDLDGLRARFGERAG
HHHHHHHHHCCCEEEEECCCHHHHHHHHHEEEEEECCCCCEEECCCCCHHHHHHHHHHHH
QAFAARAGRALAAEGLRDFPSAPIPEQVAGEAGVPAYPALVDQGDNAALHIFADRNDAAR
HHHHHHHCHHHHHHHHHHCCCCCCCHHHCCCCCCCCCHHHHCCCCCCEEEEEECCCCCCC
AHPRGVRRLLEIALADKIKQARKQLPVSPKTGLLYAAIESQERLRGDLVDAALNAVLADG
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHC
LGAIRDPGAFAQRRDDAGKRLFGEAMERLKLAESILGAVAELKPLLEAPLMGWARGNLDD
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
MEQQLRALVHAGFLRDTPADALANYPRYLRAMILRTERAKRDPARDQARMLELKPFVDAV
HHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
EAAAAHGLQDRQEWQALRWDLEELRVSVFAQELGAKSGVSAKKLSQRVAALRS
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
SAIDSTLADTLRERRRAVDGAMSRDRGRLLGLWSRWQGKPGNPQVRDAFEQALAASQAQ
CHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHH
RQARAEQQPAITLDDQLPIAREAERIIALIRNHQVVVIAGETGSGKTTQLPKLCLAAGRG
HHHHHHCCCCEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHCCCC
AAGMIGCTQPRRIAARAVAARVADELKTPLGTTVGFQVRFTDRVSDQSRIKFMTDGILLA
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHEEHHHCCCCEE
EIASDRWLSSYDTIIVDEAHERSLNIDFLLGYLKQLLRKRSDLKLIVTSATIDTERFARH
HHHHCCHHCCCCEEEEECHHCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHH
FDDAPVISVEGRTFPVEVRYRPLEGDTGDSDDGEHGSGRDGERSVNDAIVAAIDEITRID
CCCCCEEEECCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
PRGDVLMFLPGEREIRDAHQSLERRKYRETEVVPLYARLSAADQDRVFNPGPRRRLVLAT
CCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCEEHHHHHCCCCCCCCCCCCCCCEEEEEE
NVAETSLTVPRIRYVVDPGLARVKRYSPRQKLDRLHIEPISQASANQRMGRCGRIAEGIC
CCCHHCCCCHHHHHHCCCHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
YRLYAEADFAARPAFTDPEIRRSSLSGVILRMLQLGLGRIEDFPFLEAPDERALADGWQQ
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH
LLELGAIDAQRRLTATGRQMARLPVDVKLARMLVAAQQHGCLREMIIIAAFLGIQDPRER
HHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCC
PPEAREAADNAHALFADARSEFVGILRLWDAYRQVHEDLTQSKLRDWCNRHFLGFLRMRE
CCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WRELHRQLRLLCEELGWSEEPANVMLAPLLAGASAPAREDGHSVNRPTRGQLHRAARLAR
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
EGKPDPNAAPVQPAPAATNKQAEAAEASARTTERERAAAYQALHRALLAGLPTQIGHRTE
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCC
KGDYLAARQRRFVPFPGSALARKPPPWILAATLLDTQKVWGMTNAAIEPDWAIAELPHLL
CCCHHHHHCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
ARKHFDAHWSRAQGQVVASEQISLFGLVLAPKKPVHFGKIDPAAAHDLFVRQGLVTGEIN
HHHHHHHHHHHCCCCEEECCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCEECCCC
TRAAFVADNLKVLEQAREEEAKLRRAGIVADEGWQARWYLDRIPAELHSASGLDAWWKTL
CCHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCEEHHHHHCCHHHHCCCCCHHHHHCC
PPDKRRSLHWSLNDLLPGEGSEADRFPKYFPLGDARLPLHYRFEPGAIDDGVTLEVPLHL
CCCCCCCEEEEHHHCCCCCCCCHHCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEHHHHH
LNALDPARLSWLAPGFVADKASALIRSLPKAQRRNYVPAPDFGRAFYEAFSIASADDIRG
HCCCCHHHHHHCCCCHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHH
ELARFLTKATGTQVTALDFDEQALDTHLLMNLRLRDDDGKVLAESRDLDGLRARFGERAG
HHHHHHHHHCCCEEEEECCCHHHHHHHHHEEEEEECCCCCEEECCCCCHHHHHHHHHHHH
QAFAARAGRALAAEGLRDFPSAPIPEQVAGEAGVPAYPALVDQGDNAALHIFADRNDAAR
HHHHHHHCHHHHHHHHHHCCCCCCCHHHCCCCCCCCCHHHHCCCCCCEEEEEECCCCCCC
AHPRGVRRLLEIALADKIKQARKQLPVSPKTGLLYAAIESQERLRGDLVDAALNAVLADG
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHC
LGAIRDPGAFAQRRDDAGKRLFGEAMERLKLAESILGAVAELKPLLEAPLMGWARGNLDD
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
MEQQLRALVHAGFLRDTPADALANYPRYLRAMILRTERAKRDPARDQARMLELKPFVDAV
HHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
EAAAAHGLQDRQEWQALRWDLEELRVSVFAQELGAKSGVSAKKLSQRVAALRS
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7899078; 9097039; 9278503 [H]