Click here to switch to the map view.

The map label for this gene is 78048799

Identifier: 78048799

GI number: 78048799

Start: 3703570

End: 3705072

Strand: Reverse

Name: 78048799

Synonym: XCV3243

Alternate gene names: NA

Gene position: 3705072-3703570 (Counterclockwise)

Preceding gene: 78048800

Following gene: 78048797

Centisome position: 71.55

GC content: 72.85

Gene sequence:

>1503_bases
ATGTCTCCGCTCCCGCGCTGGGCCAGATCGCCCCGCCTCTGGGCGCCACTGCGCAGCCGTGCGCTCTGGCGCATGGTGTT
GGCGCTGTGCGCCTGCTTGCTGCTCACCGTGATCGTGCTGCGCAAGCCGCTGGCCGATTGGCTGTGGCCGGACACGCGCA
TCCAGCAATTGTTGCAGCGGGGCGATGCGGCCCTGGCACGCGGCCAGCTCAGCGCCGCCAACGGCAACGGTGCGCGCGAA
CTGTTCGCCGCCGCGCTTGCACTGGACAGCGACCGTGGGGAAGCCCGTACCGGGCTGGCGCGGACCGGCGCTGCTGCGGT
AGCGCAGGCGCGTGCAGCGGTTGCGGCAGGCGATGCCGCAGCAGCGCAGCGCGCGCTGGCGCTGGCCACCGCCCTGGAGA
CGCCGCAGGCGCAGATCGCCCCGGTTGCGGCGCGGCTGCGCGCGCTGCAGGCGCGTCGGGTGGGGCTGGATGCCTTGCTG
GCGCAGGCCGCGCTCGCGCAGCAGCAGGGTCGCCTGGACGGCACGCCGGAGAGTGCGTTGCCGCTCTATCAACGCATCCT
GACCCTGGCGCCCGACCGCACCGACGCACTGGAAGGCCGCGAGGACGCCCTGACCGATCTGTTGGCGCAGGCACGCCACG
CACTGGCGCGCGATGCGCTCGGCGAGGCGTCGGCGTTGCTGGCCGCGGCCAAGCGTTACGACCCCAGGCATGTCGACATG
CCGCAGTACCACCGCCTGCTGGAACAGCGACGTCAGCGCGCGCAGGCCTTGCTGCGACGTGGCCGCCTGGCCCCGGCTGC
GCGCGATTTCAACGCGGTGCTGGCCGCCGAACCGGACGATGCAATCGCCCAGCGCGGCCGCGATCAGGTCGCGGACGAGT
ACGCCGCACAGGCCAGCCGGCAGGCGGCGGATTTCCACTTCGACGATGCGCTGCAATCCCTGCGTCAGGCACAGCTCCTG
GTGCCTGGCGCCGCATCGATCGTGCAGGCCGAGCAAGCGATTGCGCGCGCGCGCGACGCCCAGCGCGGCCCGGACGCGAG
CCTGTCGCGGGGCACGCGCGAGCGCCGCCTGCGGGCATTGCTGCAGCGCGTTGCCGATGCCGAAGCGCAGCAACGCTGGA
TGACACCGCCTGGCGCCAGCGCCTATGACGCCGTGCGTGCCGCGCAGGCGCTGGCGCCACGCGATCCGCGTGTGCTGCAG
GCCGCGGCGCGCGTGGTACCGGCCAGCCAACGTTGTTTCGAGGACGAACTGCGCAACAACCGCCTGCGCGCCGCGCGCGG
GTGCCTGGATGCCTGGCAGGCGCTGACGCCCAATGCCGATGCATTGGCCGGTGCGCGACGCCGCCTTGCACAGCGCTGGG
TGGCGGTCGGGAGCGAACGGCTGGGCCAGGAGGACGCAGCCTTCGCCCGCCGTGCGCAGGACGAGGCGCATCAGCTGGAT
CCGGGTTTGCCGGAACTTGCCGAATTCACGCGACGGGTCAAGGCGGTGGCCGAACAGCGGTGA

Upstream 100 bases:

>100_bases
CCGATTCCCGAAGAGCCCACACCGCCTTCGCAGCCTCCACCGCTACCATAATGCGGTGAACGCGTCCCCGTCAGGTCGCG
CCAAGGATGGACGCCACCGT

Downstream 100 bases:

>100_bases
GCAGTTGCTGGTGATGTGGGTAACGTGGAAGCCCGCCGAGCGTGTGTCGTCCCAAGGTCTCAGGCCCGTGTTGCATCAGG
TACAGGCACAGTCCCACGCT

Product: putative secreted protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 500; Mature: 499

Protein sequence:

>500_residues
MSPLPRWARSPRLWAPLRSRALWRMVLALCACLLLTVIVLRKPLADWLWPDTRIQQLLQRGDAALARGQLSAANGNGARE
LFAAALALDSDRGEARTGLARTGAAAVAQARAAVAAGDAAAAQRALALATALETPQAQIAPVAARLRALQARRVGLDALL
AQAALAQQQGRLDGTPESALPLYQRILTLAPDRTDALEGREDALTDLLAQARHALARDALGEASALLAAAKRYDPRHVDM
PQYHRLLEQRRQRAQALLRRGRLAPAARDFNAVLAAEPDDAIAQRGRDQVADEYAAQASRQAADFHFDDALQSLRQAQLL
VPGAASIVQAEQAIARARDAQRGPDASLSRGTRERRLRALLQRVADAEAQQRWMTPPGASAYDAVRAAQALAPRDPRVLQ
AAARVVPASQRCFEDELRNNRLRAARGCLDAWQALTPNADALAGARRRLAQRWVAVGSERLGQEDAAFARRAQDEAHQLD
PGLPELAEFTRRVKAVAEQR

Sequences:

>Translated_500_residues
MSPLPRWARSPRLWAPLRSRALWRMVLALCACLLLTVIVLRKPLADWLWPDTRIQQLLQRGDAALARGQLSAANGNGARE
LFAAALALDSDRGEARTGLARTGAAAVAQARAAVAAGDAAAAQRALALATALETPQAQIAPVAARLRALQARRVGLDALL
AQAALAQQQGRLDGTPESALPLYQRILTLAPDRTDALEGREDALTDLLAQARHALARDALGEASALLAAAKRYDPRHVDM
PQYHRLLEQRRQRAQALLRRGRLAPAARDFNAVLAAEPDDAIAQRGRDQVADEYAAQASRQAADFHFDDALQSLRQAQLL
VPGAASIVQAEQAIARARDAQRGPDASLSRGTRERRLRALLQRVADAEAQQRWMTPPGASAYDAVRAAQALAPRDPRVLQ
AAARVVPASQRCFEDELRNNRLRAARGCLDAWQALTPNADALAGARRRLAQRWVAVGSERLGQEDAAFARRAQDEAHQLD
PGLPELAEFTRRVKAVAEQR
>Mature_499_residues
SPLPRWARSPRLWAPLRSRALWRMVLALCACLLLTVIVLRKPLADWLWPDTRIQQLLQRGDAALARGQLSAANGNGAREL
FAAALALDSDRGEARTGLARTGAAAVAQARAAVAAGDAAAAQRALALATALETPQAQIAPVAARLRALQARRVGLDALLA
QAALAQQQGRLDGTPESALPLYQRILTLAPDRTDALEGREDALTDLLAQARHALARDALGEASALLAAAKRYDPRHVDMP
QYHRLLEQRRQRAQALLRRGRLAPAARDFNAVLAAEPDDAIAQRGRDQVADEYAAQASRQAADFHFDDALQSLRQAQLLV
PGAASIVQAEQAIARARDAQRGPDASLSRGTRERRLRALLQRVADAEAQQRWMTPPGASAYDAVRAAQALAPRDPRVLQA
AARVVPASQRCFEDELRNNRLRAARGCLDAWQALTPNADALAGARRRLAQRWVAVGSERLGQEDAAFARRAQDEAHQLDP
GLPELAEFTRRVKAVAEQR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54247; Mature: 54116

Theoretical pI: Translated: 11.38; Mature: 11.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPLPRWARSPRLWAPLRSRALWRMVLALCACLLLTVIVLRKPLADWLWPDTRIQQLLQR
CCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
GDAALARGQLSAANGNGARELFAAALALDSDRGEARTGLARTGAAAVAQARAAVAAGDAA
CHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHH
AAQRALALATALETPQAQIAPVAARLRALQARRVGLDALLAQAALAQQQGRLDGTPESAL
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
PLYQRILTLAPDRTDALEGREDALTDLLAQARHALARDALGEASALLAAAKRYDPRHVDM
HHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PQYHRLLEQRRQRAQALLRRGRLAPAARDFNAVLAAEPDDAIAQRGRDQVADEYAAQASR
HHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCHHEECCCCHHHHHCCHHHHHHHHHHHHHH
QAADFHFDDALQSLRQAQLLVPGAASIVQAEQAIARARDAQRGPDASLSRGTRERRLRAL
HHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHH
LQRVADAEAQQRWMTPPGASAYDAVRAAQALAPRDPRVLQAAARVVPASQRCFEDELRNN
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHCC
RLRAARGCLDAWQALTPNADALAGARRRLAQRWVAVGSERLGQEDAAFARRAQDEAHQLD
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
PGLPELAEFTRRVKAVAEQR
CCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SPLPRWARSPRLWAPLRSRALWRMVLALCACLLLTVIVLRKPLADWLWPDTRIQQLLQR
CCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
GDAALARGQLSAANGNGARELFAAALALDSDRGEARTGLARTGAAAVAQARAAVAAGDAA
CHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHH
AAQRALALATALETPQAQIAPVAARLRALQARRVGLDALLAQAALAQQQGRLDGTPESAL
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
PLYQRILTLAPDRTDALEGREDALTDLLAQARHALARDALGEASALLAAAKRYDPRHVDM
HHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PQYHRLLEQRRQRAQALLRRGRLAPAARDFNAVLAAEPDDAIAQRGRDQVADEYAAQASR
HHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCHHEECCCCHHHHHCCHHHHHHHHHHHHHH
QAADFHFDDALQSLRQAQLLVPGAASIVQAEQAIARARDAQRGPDASLSRGTRERRLRAL
HHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHH
LQRVADAEAQQRWMTPPGASAYDAVRAAQALAPRDPRVLQAAARVVPASQRCFEDELRNN
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHCC
RLRAARGCLDAWQALTPNADALAGARRRLAQRWVAVGSERLGQEDAAFARRAQDEAHQLD
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
PGLPELAEFTRRVKAVAEQR
CCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA