| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is deaD [H]
Identifier: 78048530
GI number: 78048530
Start: 3383466
End: 3385412
Strand: Reverse
Name: deaD [H]
Synonym: XCV2974
Alternate gene names: 78048530
Gene position: 3385412-3383466 (Counterclockwise)
Preceding gene: 78048535
Following gene: 78048529
Centisome position: 65.37
GC content: 68.1
Gene sequence:
>1947_bases ATGCTGCTTTGCGCCTGCCGGCTCCGTGCGGCGCCTCCGGAGTTACCCATGACCCAAGAATCTTCCGCGCCGCTGCTGTT TGCAGATCTCGGCCTCTCGGACGCTGTGATGAAGGCCGTTGCCAATGTCGGCTACGAGTCGCCGTCGCCGATCCAGGCTG CCACCATCCCCGCGTTGCTGGCCGGTCGCGACGTACTCGGCCAGGCCCAGACCGGTACCGGCAAGACCGCCGCGTTCGCG CTGCCGGTGCTGTCCAACGCCGATCTCCACCAGGTCAAGCCGCAGGCATTGGTGCTGGCCCCGACCCGCGAACTGGCCAT CCAGGTCGCCGAGGCGTTCCAGAAATATGCCGAAGCCATTCCCGGCTTCCGCGTGCTGCCGGTCTACGGCGGCCAGCCGT ATGCCCAGCAGCTGAGCGCGCTCAAGCGCGGCGTGCACGTGGTGGTCGGTACCCCGGGCCGGGTGATCGATCACCTGGAC CGCGGTACCCTGGATCTGTCGCAGCTCAAGACGCTGGTGCTGGACGAAGCCGACGAAATGCTGCGCATGGGCTTCATCGA CGACGTCGAAGCGGTGCTGAAGAAGTTGCCGGCGCAGCGCCAGGTGGCCTTGTTCTCGGCCACCATGCCGCCGGCCATCC GCCGTATCGCGCAGACCTATCTGAAGGACCCGGCCGAAGTCACCATCGCGGCCAAGACCACCACCTCGGCCAACATCCGC CAGCGCTACTGGTGGGTGAGCGGGCTGCACAAGCTGGACGCGTTGACCCGCATTCTCGAGGTCGAGCCGTTCGACGGCAT GATCATCTTCGCGCGCACCAAGGCGGCCACCGAAGAGCTGGCGCAGAAGCTGCAGGCGCGCGGCATGGCGGCAGCGGCCA TCAACGGCGACATGCAGCAGGCCGCACGCGAGAAGACCATCGCCCAGCTCAAGGACGGCAAGCTGGACATCCTGGTGGCC ACCGACGTGGCCGCACGCGGTCTGGACGTGGAGCGCATCAGCCACGTGCTGAACTACGACATTCCCTACGACACCGAAAG CTACGTGCACCGCATCGGTCGCACCGGCCGTGCCGGGCGTAACGGCGACGCGATCCTGTTCGTGACGCCGCGCGAGAAGG GCATGCTGCGCTCCATCGAACGCGCCACCCGTCAGCCGATCGAAGAGATGCAGCTGCCGAGCGTGGACGCGGTCAACGAC ACCCGCGTCGCGCGTTTCATGAGCCGCATCACCGAGACCCTGGCCGGTGGCCAGATCGACATGTACCGCGACCTGCTGCA GCGCTACGAAGCCGAAAACAACGTGCCGGCGATCGATATCGCCGCCGCGCTGGCCAAGCTGCTGCAGGGCGATGCCCCGT TCCTGCTGACCCCGCCGGTGCGCGGTGCGCGCGAGGACACTGCGCCGCGCGAACGTCATGAGCGTGCCGACCGCGGCGAT CGCCCCCGCTTCGAGCCGAAGTTCGAACGTGGCCCGCGTGCCGACGGCGAGCGCGCTGCACGCCCGCCGCGCGGTGACGA TGCCGGCGAGCGTCCACGCCGCGAGCCGGCCCCACGTGGCGAGCCGGAGTTCGGCATGGAGAGCTACCGCATCGAAGTGG GCCACAGCCACGGCGTGAAGCCGGCCAACATCGTTGGCGCGATCGCCAACGAAGCCGGGCTGGAAAGCCGGTATATCGGT CGTATCGATATCCAGGACGATTATTCGATCCTGGATCTGCCGGCCGACATGCCGCGCGAACTGCTGCAGCACCTCAAGAA GGTCTGGGTGTCTGGCCAGCAGCTCAACATGCGCAAGCTGGAAGACGGCGAAGCGGCCGCAGCGGCGTCCAAGCCGCGCT TCCCGCGTGGCGGCAAGCCGTCCGGTCGCCCGAACGGCCCGGGTCGTCCGATGGACCGCGCCGGCGCGCCGCACCGCAAG GGTCCGCCGAAGCCGCGCGGCGAGTAA
Upstream 100 bases:
>100_bases GGGACGACACGGGGGATGATTCGCGCAGCAGCGCAATTCCTCACAACCTGAATGGACTGTCACGAAAATTTCGACAGCAA GGGGGCTGAAGAGGCACACT
Downstream 100 bases:
>100_bases GGCTGCCCGGCGCTGCTCGCAGGGATCCTGCAGACGGTCGGGTTGCCCAGTATCGCTATGCATCCAAGAGCATAGCGAGC GGGTAAGGCGTTACGGCGCC
Product: ATP-dependent RNA helicase
Products: NA
Alternate protein names: ATP-dependent RNA helicase deaD homolog [H]
Number of amino acids: Translated: 648; Mature: 648
Protein sequence:
>648_residues MLLCACRLRAAPPELPMTQESSAPLLFADLGLSDAVMKAVANVGYESPSPIQAATIPALLAGRDVLGQAQTGTGKTAAFA LPVLSNADLHQVKPQALVLAPTRELAIQVAEAFQKYAEAIPGFRVLPVYGGQPYAQQLSALKRGVHVVVGTPGRVIDHLD RGTLDLSQLKTLVLDEADEMLRMGFIDDVEAVLKKLPAQRQVALFSATMPPAIRRIAQTYLKDPAEVTIAAKTTTSANIR QRYWWVSGLHKLDALTRILEVEPFDGMIIFARTKAATEELAQKLQARGMAAAAINGDMQQAAREKTIAQLKDGKLDILVA TDVAARGLDVERISHVLNYDIPYDTESYVHRIGRTGRAGRNGDAILFVTPREKGMLRSIERATRQPIEEMQLPSVDAVND TRVARFMSRITETLAGGQIDMYRDLLQRYEAENNVPAIDIAAALAKLLQGDAPFLLTPPVRGAREDTAPRERHERADRGD RPRFEPKFERGPRADGERAARPPRGDDAGERPRREPAPRGEPEFGMESYRIEVGHSHGVKPANIVGAIANEAGLESRYIG RIDIQDDYSILDLPADMPRELLQHLKKVWVSGQQLNMRKLEDGEAAAAASKPRFPRGGKPSGRPNGPGRPMDRAGAPHRK GPPKPRGE
Sequences:
>Translated_648_residues MLLCACRLRAAPPELPMTQESSAPLLFADLGLSDAVMKAVANVGYESPSPIQAATIPALLAGRDVLGQAQTGTGKTAAFA LPVLSNADLHQVKPQALVLAPTRELAIQVAEAFQKYAEAIPGFRVLPVYGGQPYAQQLSALKRGVHVVVGTPGRVIDHLD RGTLDLSQLKTLVLDEADEMLRMGFIDDVEAVLKKLPAQRQVALFSATMPPAIRRIAQTYLKDPAEVTIAAKTTTSANIR QRYWWVSGLHKLDALTRILEVEPFDGMIIFARTKAATEELAQKLQARGMAAAAINGDMQQAAREKTIAQLKDGKLDILVA TDVAARGLDVERISHVLNYDIPYDTESYVHRIGRTGRAGRNGDAILFVTPREKGMLRSIERATRQPIEEMQLPSVDAVND TRVARFMSRITETLAGGQIDMYRDLLQRYEAENNVPAIDIAAALAKLLQGDAPFLLTPPVRGAREDTAPRERHERADRGD RPRFEPKFERGPRADGERAARPPRGDDAGERPRREPAPRGEPEFGMESYRIEVGHSHGVKPANIVGAIANEAGLESRYIG RIDIQDDYSILDLPADMPRELLQHLKKVWVSGQQLNMRKLEDGEAAAAASKPRFPRGGKPSGRPNGPGRPMDRAGAPHRK GPPKPRGE >Mature_648_residues MLLCACRLRAAPPELPMTQESSAPLLFADLGLSDAVMKAVANVGYESPSPIQAATIPALLAGRDVLGQAQTGTGKTAAFA LPVLSNADLHQVKPQALVLAPTRELAIQVAEAFQKYAEAIPGFRVLPVYGGQPYAQQLSALKRGVHVVVGTPGRVIDHLD RGTLDLSQLKTLVLDEADEMLRMGFIDDVEAVLKKLPAQRQVALFSATMPPAIRRIAQTYLKDPAEVTIAAKTTTSANIR QRYWWVSGLHKLDALTRILEVEPFDGMIIFARTKAATEELAQKLQARGMAAAAINGDMQQAAREKTIAQLKDGKLDILVA TDVAARGLDVERISHVLNYDIPYDTESYVHRIGRTGRAGRNGDAILFVTPREKGMLRSIERATRQPIEEMQLPSVDAVND TRVARFMSRITETLAGGQIDMYRDLLQRYEAENNVPAIDIAAALAKLLQGDAPFLLTPPVRGAREDTAPRERHERADRGD RPRFEPKFERGPRADGERAARPPRGDDAGERPRREPAPRGEPEFGMESYRIEVGHSHGVKPANIVGAIANEAGLESRYIG RIDIQDDYSILDLPADMPRELLQHLKKVWVSGQQLNMRKLEDGEAAAAASKPRFPRGGKPSGRPNGPGRPMDRAGAPHRK GPPKPRGE
Specific function: Has a helix-destabilizing activity [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI20149629, Length=382, Percent_Identity=39.5287958115183, Blast_Score=265, Evalue=8e-71, Organism=Homo sapiens, GI7661920, Length=386, Percent_Identity=36.5284974093264, Blast_Score=259, Evalue=5e-69, Organism=Homo sapiens, GI169881239, Length=378, Percent_Identity=39.4179894179894, Blast_Score=256, Evalue=4e-68, Organism=Homo sapiens, GI13514809, Length=378, Percent_Identity=39.4179894179894, Blast_Score=256, Evalue=4e-68, Organism=Homo sapiens, GI41327771, Length=392, Percent_Identity=37.7551020408163, Blast_Score=254, Evalue=1e-67, Organism=Homo sapiens, GI301171467, Length=378, Percent_Identity=38.8888888888889, Blast_Score=251, Evalue=1e-66, Organism=Homo sapiens, GI87196351, Length=378, Percent_Identity=38.8888888888889, Blast_Score=251, Evalue=2e-66, Organism=Homo sapiens, GI301171475, Length=378, Percent_Identity=38.8888888888889, Blast_Score=251, Evalue=2e-66, Organism=Homo sapiens, GI164664518, Length=354, Percent_Identity=34.4632768361582, Blast_Score=249, Evalue=8e-66, Organism=Homo sapiens, GI45446747, Length=375, Percent_Identity=37.3333333333333, Blast_Score=248, Evalue=1e-65, Organism=Homo sapiens, GI45446743, Length=375, Percent_Identity=37.3333333333333, Blast_Score=248, Evalue=1e-65, Organism=Homo sapiens, GI4758138, Length=377, Percent_Identity=38.4615384615385, Blast_Score=248, Evalue=2e-65, Organism=Homo sapiens, GI50659095, Length=406, Percent_Identity=36.9458128078818, Blast_Score=246, Evalue=4e-65, Organism=Homo sapiens, GI4503529, Length=374, Percent_Identity=39.3048128342246, Blast_Score=246, Evalue=6e-65, Organism=Homo sapiens, GI21071032, Length=357, Percent_Identity=37.5350140056022, Blast_Score=246, Evalue=7e-65, Organism=Homo sapiens, GI188035877, Length=370, Percent_Identity=35.4054054054054, Blast_Score=245, Evalue=9e-65, Organism=Homo sapiens, GI83700235, Length=374, Percent_Identity=38.5026737967914, Blast_Score=245, Evalue=1e-64, Organism=Homo sapiens, GI222352149, Length=367, Percent_Identity=37.3297002724796, Blast_Score=244, Evalue=2e-64, Organism=Homo sapiens, GI13129006, Length=451, Percent_Identity=35.4767184035477, Blast_Score=243, Evalue=3e-64, Organism=Homo sapiens, GI224593278, Length=379, Percent_Identity=37.467018469657, Blast_Score=242, Evalue=9e-64, Organism=Homo sapiens, GI38201710, Length=417, Percent_Identity=35.4916067146283, Blast_Score=241, Evalue=2e-63, Organism=Homo sapiens, GI148613856, Length=354, Percent_Identity=38.135593220339, Blast_Score=240, Evalue=3e-63, Organism=Homo sapiens, GI31542656, Length=469, Percent_Identity=33.4754797441365, Blast_Score=240, Evalue=3e-63, Organism=Homo sapiens, GI13518015, Length=361, Percent_Identity=36.01108033241, Blast_Score=233, Evalue=4e-61, Organism=Homo sapiens, GI216548263, Length=361, Percent_Identity=36.01108033241, Blast_Score=233, Evalue=5e-61, Organism=Homo sapiens, GI262231852, Length=361, Percent_Identity=36.01108033241, Blast_Score=233, Evalue=6e-61, Organism=Homo sapiens, GI21040371, Length=351, Percent_Identity=35.8974358974359, Blast_Score=233, Evalue=6e-61, Organism=Homo sapiens, GI262118318, Length=361, Percent_Identity=36.01108033241, Blast_Score=232, Evalue=6e-61, Organism=Homo sapiens, GI41327773, Length=352, Percent_Identity=36.6477272727273, Blast_Score=231, Evalue=2e-60, Organism=Homo sapiens, GI4758112, Length=351, Percent_Identity=35.042735042735, Blast_Score=230, Evalue=3e-60, Organism=Homo sapiens, GI18375623, Length=351, Percent_Identity=35.042735042735, Blast_Score=230, Evalue=3e-60, Organism=Homo sapiens, GI55749865, Length=367, Percent_Identity=32.425068119891, Blast_Score=228, Evalue=1e-59, Organism=Homo sapiens, GI41327776, Length=382, Percent_Identity=36.3874345549738, Blast_Score=226, Evalue=4e-59, Organism=Homo sapiens, GI164419743, Length=350, Percent_Identity=34.8571428571429, Blast_Score=225, Evalue=1e-58, Organism=Homo sapiens, GI51094101, Length=350, Percent_Identity=34.8571428571429, Blast_Score=224, Evalue=1e-58, Organism=Homo sapiens, GI256223453, Length=371, Percent_Identity=31.8059299191375, Blast_Score=211, Evalue=1e-54, Organism=Homo sapiens, GI41327779, Length=377, Percent_Identity=32.0954907161804, Blast_Score=206, Evalue=7e-53, Organism=Homo sapiens, GI13514831, Length=378, Percent_Identity=33.5978835978836, Blast_Score=205, Evalue=1e-52, Organism=Homo sapiens, GI6005743, Length=388, Percent_Identity=32.9896907216495, Blast_Score=202, Evalue=9e-52, Organism=Homo sapiens, GI8922886, Length=388, Percent_Identity=32.9896907216495, Blast_Score=201, Evalue=1e-51, Organism=Homo sapiens, GI62241022, Length=372, Percent_Identity=33.3333333333333, Blast_Score=197, Evalue=3e-50, Organism=Homo sapiens, GI164419732, Length=373, Percent_Identity=32.7077747989276, Blast_Score=194, Evalue=3e-49, Organism=Homo sapiens, GI38569505, Length=363, Percent_Identity=30.5785123966942, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI38569503, Length=368, Percent_Identity=30.4347826086957, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI62241024, Length=350, Percent_Identity=33.1428571428571, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI17505907, Length=416, Percent_Identity=29.3269230769231, Blast_Score=181, Evalue=2e-45, Organism=Homo sapiens, GI38327634, Length=381, Percent_Identity=31.2335958005249, Blast_Score=177, Evalue=4e-44, Organism=Homo sapiens, GI9506931, Length=401, Percent_Identity=31.6708229426434, Blast_Score=171, Evalue=2e-42, Organism=Homo sapiens, GI256773275, Length=410, Percent_Identity=30.2439024390244, Blast_Score=152, Evalue=8e-37, Organism=Homo sapiens, GI4826686, Length=352, Percent_Identity=30.1136363636364, Blast_Score=148, Evalue=2e-35, Organism=Homo sapiens, GI154759257, Length=425, Percent_Identity=30.5882352941176, Blast_Score=143, Evalue=4e-34, Organism=Homo sapiens, GI20336298, Length=227, Percent_Identity=34.3612334801762, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI9966805, Length=349, Percent_Identity=27.5071633237822, Blast_Score=119, Evalue=1e-26, Organism=Escherichia coli, GI87082221, Length=583, Percent_Identity=50.6003430531732, Blast_Score=533, Evalue=1e-152, Organism=Escherichia coli, GI1787016, Length=376, Percent_Identity=42.8191489361702, Blast_Score=301, Evalue=7e-83, Organism=Escherichia coli, GI1787605, Length=338, Percent_Identity=42.8994082840237, Blast_Score=280, Evalue=3e-76, Organism=Escherichia coli, GI1790214, Length=348, Percent_Identity=41.6666666666667, Blast_Score=258, Evalue=6e-70, Organism=Escherichia coli, GI1788930, Length=356, Percent_Identity=39.0449438202247, Blast_Score=227, Evalue=1e-60, Organism=Escherichia coli, GI48994977, Length=380, Percent_Identity=25.5263157894737, Blast_Score=88, Evalue=1e-18, Organism=Caenorhabditis elegans, GI71987143, Length=365, Percent_Identity=39.1780821917808, Blast_Score=278, Evalue=9e-75, Organism=Caenorhabditis elegans, GI17555296, Length=399, Percent_Identity=38.3458646616541, Blast_Score=268, Evalue=6e-72, Organism=Caenorhabditis elegans, GI17510307, Length=385, Percent_Identity=38.7012987012987, Blast_Score=263, Evalue=2e-70, Organism=Caenorhabditis elegans, GI71995514, Length=385, Percent_Identity=38.7012987012987, Blast_Score=263, Evalue=2e-70, Organism=Caenorhabditis elegans, GI17510309, Length=385, Percent_Identity=38.7012987012987, Blast_Score=263, Evalue=2e-70, Organism=Caenorhabditis elegans, GI71995724, Length=392, Percent_Identity=36.9897959183673, Blast_Score=259, Evalue=2e-69, Organism=Caenorhabditis elegans, GI17507121, Length=392, Percent_Identity=36.4795918367347, Blast_Score=258, Evalue=9e-69, Organism=Caenorhabditis elegans, GI71995718, Length=377, Percent_Identity=38.1962864721485, Blast_Score=255, Evalue=4e-68, Organism=Caenorhabditis elegans, GI32565321, Length=378, Percent_Identity=39.4179894179894, Blast_Score=251, Evalue=7e-67, Organism=Caenorhabditis elegans, GI17537549, Length=380, Percent_Identity=36.5789473684211, Blast_Score=246, Evalue=3e-65, Organism=Caenorhabditis elegans, GI17507945, Length=343, Percent_Identity=38.7755102040816, Blast_Score=237, Evalue=1e-62, Organism=Caenorhabditis elegans, GI86570094, Length=375, Percent_Identity=37.6, Blast_Score=236, Evalue=4e-62, Organism=Caenorhabditis elegans, GI17552642, Length=380, Percent_Identity=36.8421052631579, Blast_Score=233, Evalue=2e-61, Organism=Caenorhabditis elegans, GI17552114, Length=362, Percent_Identity=33.9779005524862, Blast_Score=233, Evalue=3e-61, Organism=Caenorhabditis elegans, GI17510559, Length=392, Percent_Identity=35.2040816326531, Blast_Score=232, Evalue=4e-61, Organism=Caenorhabditis elegans, GI115533224, Length=354, Percent_Identity=37.5706214689266, Blast_Score=228, Evalue=9e-60, Organism=Caenorhabditis elegans, GI71982858, Length=349, Percent_Identity=35.5300859598854, Blast_Score=228, Evalue=9e-60, Organism=Caenorhabditis elegans, GI17509811, Length=398, Percent_Identity=34.9246231155779, Blast_Score=223, Evalue=3e-58, Organism=Caenorhabditis elegans, GI17507877, Length=371, Percent_Identity=33.6927223719677, Blast_Score=212, Evalue=4e-55, Organism=Caenorhabditis elegans, GI17507879, Length=371, Percent_Identity=33.4231805929919, Blast_Score=212, Evalue=5e-55, Organism=Caenorhabditis elegans, GI17507881, Length=370, Percent_Identity=32.7027027027027, Blast_Score=205, Evalue=6e-53, Organism=Caenorhabditis elegans, GI193206561, Length=343, Percent_Identity=33.2361516034985, Blast_Score=204, Evalue=2e-52, Organism=Caenorhabditis elegans, GI115532548, Length=392, Percent_Identity=29.8469387755102, Blast_Score=202, Evalue=4e-52, Organism=Caenorhabditis elegans, GI115532546, Length=392, Percent_Identity=29.8469387755102, Blast_Score=201, Evalue=1e-51, Organism=Caenorhabditis elegans, GI71999644, Length=349, Percent_Identity=32.378223495702, Blast_Score=198, Evalue=9e-51, Organism=Caenorhabditis elegans, GI71999646, Length=349, Percent_Identity=32.378223495702, Blast_Score=197, Evalue=1e-50, Organism=Caenorhabditis elegans, GI193208216, Length=401, Percent_Identity=31.9201995012469, Blast_Score=197, Evalue=1e-50, Organism=Caenorhabditis elegans, GI17536099, Length=405, Percent_Identity=32.5925925925926, Blast_Score=194, Evalue=2e-49, Organism=Caenorhabditis elegans, GI17536101, Length=405, Percent_Identity=32.5925925925926, Blast_Score=193, Evalue=2e-49, Organism=Caenorhabditis elegans, GI17536103, Length=405, Percent_Identity=32.5925925925926, Blast_Score=192, Evalue=5e-49, Organism=Caenorhabditis elegans, GI17505370, Length=426, Percent_Identity=30.0469483568075, Blast_Score=179, Evalue=6e-45, Organism=Caenorhabditis elegans, GI17553716, Length=362, Percent_Identity=29.8342541436464, Blast_Score=177, Evalue=2e-44, Organism=Caenorhabditis elegans, GI17508543, Length=382, Percent_Identity=30.1047120418848, Blast_Score=174, Evalue=1e-43, Organism=Caenorhabditis elegans, GI25148203, Length=410, Percent_Identity=26.0975609756098, Blast_Score=166, Evalue=3e-41, Organism=Caenorhabditis elegans, GI17556951, Length=373, Percent_Identity=27.8820375335121, Blast_Score=154, Evalue=2e-37, Organism=Caenorhabditis elegans, GI17507641, Length=392, Percent_Identity=29.8469387755102, Blast_Score=144, Evalue=1e-34, Organism=Caenorhabditis elegans, GI71990816, Length=359, Percent_Identity=29.8050139275766, Blast_Score=143, Evalue=3e-34, Organism=Caenorhabditis elegans, GI71982862, Length=201, Percent_Identity=34.3283582089552, Blast_Score=137, Evalue=1e-32, Organism=Caenorhabditis elegans, GI25148291, Length=333, Percent_Identity=28.5285285285285, Blast_Score=135, Evalue=5e-32, Organism=Caenorhabditis elegans, GI32564046, Length=379, Percent_Identity=29.8153034300792, Blast_Score=135, Evalue=8e-32, Organism=Caenorhabditis elegans, GI71997889, Length=367, Percent_Identity=28.0653950953678, Blast_Score=122, Evalue=6e-28, Organism=Caenorhabditis elegans, GI25148205, Length=339, Percent_Identity=25.0737463126844, Blast_Score=119, Evalue=4e-27, Organism=Caenorhabditis elegans, GI71987152, Length=99, Percent_Identity=45.4545454545455, Blast_Score=99, Evalue=8e-21, Organism=Caenorhabditis elegans, GI17557982, Length=387, Percent_Identity=23.5142118863049, Blast_Score=92, Evalue=6e-19, Organism=Saccharomyces cerevisiae, GI6324217, Length=373, Percent_Identity=40.7506702412869, Blast_Score=269, Evalue=1e-72, Organism=Saccharomyces cerevisiae, GI6321856, Length=413, Percent_Identity=38.9830508474576, Blast_Score=257, Evalue=4e-69, Organism=Saccharomyces cerevisiae, GI6325138, Length=387, Percent_Identity=37.4677002583979, Blast_Score=253, Evalue=7e-68, Organism=Saccharomyces cerevisiae, GI6320224, Length=374, Percent_Identity=35.5614973262032, Blast_Score=251, Evalue=3e-67, Organism=Saccharomyces cerevisiae, GI6324778, Length=395, Percent_Identity=35.9493670886076, Blast_Score=250, Evalue=5e-67, Organism=Saccharomyces cerevisiae, GI6321360, Length=380, Percent_Identity=39.2105263157895, Blast_Score=242, Evalue=2e-64, Organism=Saccharomyces cerevisiae, GI6320041, Length=355, Percent_Identity=35.2112676056338, Blast_Score=234, Evalue=4e-62, Organism=Saccharomyces cerevisiae, GI6323021, Length=374, Percent_Identity=37.9679144385027, Blast_Score=233, Evalue=1e-61, Organism=Saccharomyces cerevisiae, GI6322912, Length=369, Percent_Identity=37.940379403794, Blast_Score=231, Evalue=3e-61, Organism=Saccharomyces cerevisiae, GI6322323, Length=369, Percent_Identity=37.940379403794, Blast_Score=231, Evalue=3e-61, Organism=Saccharomyces cerevisiae, GI6323947, Length=431, Percent_Identity=31.7865429234339, Blast_Score=217, Evalue=5e-57, Organism=Saccharomyces cerevisiae, GI6320119, Length=352, Percent_Identity=34.6590909090909, Blast_Score=216, Evalue=1e-56, Organism=Saccharomyces cerevisiae, GI6320449, Length=368, Percent_Identity=36.4130434782609, Blast_Score=213, Evalue=5e-56, Organism=Saccharomyces cerevisiae, GI6324620, Length=396, Percent_Identity=34.3434343434343, Blast_Score=212, Evalue=1e-55, Organism=Saccharomyces cerevisiae, GI6319714, Length=445, Percent_Identity=30.3370786516854, Blast_Score=206, Evalue=7e-54, Organism=Saccharomyces cerevisiae, GI6321963, Length=393, Percent_Identity=34.3511450381679, Blast_Score=202, Evalue=1e-52, Organism=Saccharomyces cerevisiae, GI6321111, Length=352, Percent_Identity=33.5227272727273, Blast_Score=201, Evalue=4e-52, Organism=Saccharomyces cerevisiae, GI6322427, Length=366, Percent_Identity=33.879781420765, Blast_Score=198, Evalue=2e-51, Organism=Saccharomyces cerevisiae, GI6319618, Length=434, Percent_Identity=29.2626728110599, Blast_Score=168, Evalue=3e-42, Organism=Saccharomyces cerevisiae, GI6321267, Length=374, Percent_Identity=32.3529411764706, Blast_Score=165, Evalue=2e-41, Organism=Saccharomyces cerevisiae, GI6320400, Length=458, Percent_Identity=27.5109170305677, Blast_Score=154, Evalue=6e-38, Organism=Saccharomyces cerevisiae, GI6323306, Length=411, Percent_Identity=26.2773722627737, Blast_Score=150, Evalue=5e-37, Organism=Saccharomyces cerevisiae, GI6320173, Length=273, Percent_Identity=33.3333333333333, Blast_Score=150, Evalue=7e-37, Organism=Saccharomyces cerevisiae, GI6322876, Length=439, Percent_Identity=28.0182232346241, Blast_Score=143, Evalue=7e-35, Organism=Saccharomyces cerevisiae, GI6324366, Length=345, Percent_Identity=24.6376811594203, Blast_Score=107, Evalue=4e-24, Organism=Saccharomyces cerevisiae, GI6321374, Length=215, Percent_Identity=26.046511627907, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI24584399, Length=351, Percent_Identity=40.1709401709402, Blast_Score=271, Evalue=1e-72, Organism=Drosophila melanogaster, GI21355075, Length=354, Percent_Identity=40.1129943502825, Blast_Score=267, Evalue=1e-71, Organism=Drosophila melanogaster, GI24585582, Length=358, Percent_Identity=38.8268156424581, Blast_Score=257, Evalue=2e-68, Organism=Drosophila melanogaster, GI24662330, Length=367, Percent_Identity=38.6920980926431, Blast_Score=252, Evalue=6e-67, Organism=Drosophila melanogaster, GI24582080, Length=365, Percent_Identity=39.1780821917808, Blast_Score=252, Evalue=6e-67, Organism=Drosophila melanogaster, GI24582078, Length=365, Percent_Identity=39.1780821917808, Blast_Score=252, Evalue=6e-67, Organism=Drosophila melanogaster, GI17136248, Length=365, Percent_Identity=39.1780821917808, Blast_Score=252, Evalue=6e-67, Organism=Drosophila melanogaster, GI24582075, Length=365, Percent_Identity=39.1780821917808, Blast_Score=252, Evalue=6e-67, Organism=Drosophila melanogaster, GI24645031, Length=373, Percent_Identity=35.9249329758713, Blast_Score=251, Evalue=8e-67, Organism=Drosophila melanogaster, GI28574962, Length=353, Percent_Identity=39.943342776204, Blast_Score=251, Evalue=1e-66, Organism=Drosophila melanogaster, GI17977678, Length=356, Percent_Identity=37.6404494382022, Blast_Score=248, Evalue=7e-66, Organism=Drosophila melanogaster, GI24584994, Length=392, Percent_Identity=37.2448979591837, Blast_Score=248, Evalue=9e-66, Organism=Drosophila melanogaster, GI18857967, Length=383, Percent_Identity=36.5535248041775, Blast_Score=243, Evalue=2e-64, Organism=Drosophila melanogaster, GI17985987, Length=379, Percent_Identity=37.9947229551451, Blast_Score=243, Evalue=2e-64, Organism=Drosophila melanogaster, GI24642151, Length=366, Percent_Identity=36.8852459016393, Blast_Score=243, Evalue=2e-64, Organism=Drosophila melanogaster, GI24644479, Length=377, Percent_Identity=35.5437665782493, Blast_Score=243, Evalue=3e-64, Organism=Drosophila melanogaster, GI24644483, Length=377, Percent_Identity=35.5437665782493, Blast_Score=243, Evalue=3e-64, Organism=Drosophila melanogaster, GI24644487, Length=377, Percent_Identity=35.5437665782493, Blast_Score=243, Evalue=4e-64, Organism=Drosophila melanogaster, GI45551833, Length=377, Percent_Identity=35.5437665782493, Blast_Score=243, Evalue=4e-64, Organism=Drosophila melanogaster, GI24644485, Length=377, Percent_Identity=35.5437665782493, Blast_Score=243, Evalue=4e-64, Organism=Drosophila melanogaster, GI281361218, Length=377, Percent_Identity=35.5437665782493, Blast_Score=242, Evalue=5e-64, Organism=Drosophila melanogaster, GI24644481, Length=377, Percent_Identity=35.5437665782493, Blast_Score=242, Evalue=5e-64, Organism=Drosophila melanogaster, GI24583279, Length=355, Percent_Identity=34.9295774647887, Blast_Score=235, Evalue=8e-62, Organism=Drosophila melanogaster, GI24583281, Length=355, Percent_Identity=34.9295774647887, Blast_Score=235, Evalue=9e-62, Organism=Drosophila melanogaster, GI24581954, Length=353, Percent_Identity=35.9773371104816, Blast_Score=221, Evalue=9e-58, Organism=Drosophila melanogaster, GI24581952, Length=353, Percent_Identity=35.9773371104816, Blast_Score=221, Evalue=9e-58, Organism=Drosophila melanogaster, GI24581956, Length=353, Percent_Identity=35.9773371104816, Blast_Score=221, Evalue=9e-58, Organism=Drosophila melanogaster, GI21356161, Length=378, Percent_Identity=33.8624338624339, Blast_Score=220, Evalue=2e-57, Organism=Drosophila melanogaster, GI17136814, Length=389, Percent_Identity=35.9897172236504, Blast_Score=217, Evalue=2e-56, Organism=Drosophila melanogaster, GI28575014, Length=367, Percent_Identity=32.6975476839237, Blast_Score=204, Evalue=2e-52, Organism=Drosophila melanogaster, GI281365720, Length=312, Percent_Identity=38.4615384615385, Blast_Score=203, Evalue=3e-52, Organism=Drosophila melanogaster, GI28571808, Length=490, Percent_Identity=28.5714285714286, Blast_Score=194, Evalue=2e-49, Organism=Drosophila melanogaster, GI28571809, Length=490, Percent_Identity=28.5714285714286, Blast_Score=194, Evalue=2e-49, Organism=Drosophila melanogaster, GI21355559, Length=388, Percent_Identity=33.5051546391753, Blast_Score=184, Evalue=2e-46, Organism=Drosophila melanogaster, GI17647335, Length=358, Percent_Identity=31.0055865921788, Blast_Score=182, Evalue=5e-46, Organism=Drosophila melanogaster, GI24643725, Length=400, Percent_Identity=29.25, Blast_Score=170, Evalue=3e-42, Organism=Drosophila melanogaster, GI24666101, Length=349, Percent_Identity=33.2378223495702, Blast_Score=169, Evalue=5e-42, Organism=Drosophila melanogaster, GI20130173, Length=526, Percent_Identity=26.615969581749, Blast_Score=165, Evalue=8e-41, Organism=Drosophila melanogaster, GI24642822, Length=378, Percent_Identity=30.952380952381, Blast_Score=165, Evalue=1e-40, Organism=Drosophila melanogaster, GI19920478, Length=367, Percent_Identity=28.8828337874659, Blast_Score=145, Evalue=9e-35, Organism=Drosophila melanogaster, GI24668515, Length=327, Percent_Identity=29.6636085626911, Blast_Score=137, Evalue=2e-32, Organism=Drosophila melanogaster, GI24640164, Length=363, Percent_Identity=25.8953168044077, Blast_Score=123, Evalue=3e-28, Organism=Drosophila melanogaster, GI18859659, Length=198, Percent_Identity=35.8585858585859, Blast_Score=122, Evalue=9e-28, Organism=Drosophila melanogaster, GI28571338, Length=198, Percent_Identity=35.8585858585859, Blast_Score=122, Evalue=9e-28, Organism=Drosophila melanogaster, GI17136666, Length=417, Percent_Identity=26.378896882494, Blast_Score=109, Evalue=7e-24, Organism=Drosophila melanogaster, GI24646066, Length=419, Percent_Identity=25.5369928400955, Blast_Score=89, Evalue=7e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005580 - InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF03880 DbpA; PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 70845; Mature: 70845
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLCACRLRAAPPELPMTQESSAPLLFADLGLSDAVMKAVANVGYESPSPIQAATIPALL CEEEEEECCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCHHHHHHHHH AGRDVLGQAQTGTGKTAAFALPVLSNADLHQVKPQALVLAPTRELAIQVAEAFQKYAEAI HCCHHHCCCCCCCCCCCEEEEHHCCCCCHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHC PGFRVLPVYGGQPYAQQLSALKRGVHVVVGTPGRVIDHLDRGTLDLSQLKTLVLDEADEM CCCEEEEECCCCHHHHHHHHHHCCCEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHH LRMGFIDDVEAVLKKLPAQRQVALFSATMPPAIRRIAQTYLKDPAEVTIAAKTTTSANIR HHHCCHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCHHH QRYWWVSGLHKLDALTRILEVEPFDGMIIFARTKAATEELAQKLQARGMAAAAINGDMQQ HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHCCCEEEHHCCHHHH AAREKTIAQLKDGKLDILVATDVAARGLDVERISHVLNYDIPYDTESYVHRIGRTGRAGR HHHHHHHHHHCCCCEEEEEECCHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCC NGDAILFVTPREKGMLRSIERATRQPIEEMQLPSVDAVNDTRVARFMSRITETLAGGQID CCCEEEEECCCCCHHHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCHH MYRDLLQRYEAENNVPAIDIAAALAKLLQGDAPFLLTPPVRGAREDTAPRERHERADRGD HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCHHHHHHHCCCCC RPRFEPKFERGPRADGERAARPPRGDDAGERPRREPAPRGEPEFGMESYRIEVGHSHGVK CCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCC PANIVGAIANEAGLESRYIGRIDIQDDYSILDLPADMPRELLQHLKKVWVSGQQLNMRKL HHHHHHHHHHHCCCCCCCEEEEECCCCCCEEECCHHHHHHHHHHHHHHHCCCCCCCHHHC EDGEAAAAASKPRFPRGGKPSGRPNGPGRPMDRAGAPHRKGPPKPRGE CCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLLCACRLRAAPPELPMTQESSAPLLFADLGLSDAVMKAVANVGYESPSPIQAATIPALL CEEEEEECCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCHHHHHHHHH AGRDVLGQAQTGTGKTAAFALPVLSNADLHQVKPQALVLAPTRELAIQVAEAFQKYAEAI HCCHHHCCCCCCCCCCCEEEEHHCCCCCHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHC PGFRVLPVYGGQPYAQQLSALKRGVHVVVGTPGRVIDHLDRGTLDLSQLKTLVLDEADEM CCCEEEEECCCCHHHHHHHHHHCCCEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHH LRMGFIDDVEAVLKKLPAQRQVALFSATMPPAIRRIAQTYLKDPAEVTIAAKTTTSANIR HHHCCHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCHHH QRYWWVSGLHKLDALTRILEVEPFDGMIIFARTKAATEELAQKLQARGMAAAAINGDMQQ HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHCCCEEEHHCCHHHH AAREKTIAQLKDGKLDILVATDVAARGLDVERISHVLNYDIPYDTESYVHRIGRTGRAGR HHHHHHHHHHCCCCEEEEEECCHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCC NGDAILFVTPREKGMLRSIERATRQPIEEMQLPSVDAVNDTRVARFMSRITETLAGGQID CCCEEEEECCCCCHHHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCHH MYRDLLQRYEAENNVPAIDIAAALAKLLQGDAPFLLTPPVRGAREDTAPRERHERADRGD HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCHHHHHHHCCCCC RPRFEPKFERGPRADGERAARPPRGDDAGERPRREPAPRGEPEFGMESYRIEVGHSHGVK CCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCC PANIVGAIANEAGLESRYIGRIDIQDDYSILDLPADMPRELLQHLKKVWVSGQQLNMRKL HHHHHHHHHHHCCCCCCCEEEEECCCCCCEEECCHHHHHHHHHHHHHHHCCCCCCCHHHC EDGEAAAAASKPRFPRGGKPSGRPNGPGRPMDRAGAPHRKGPPKPRGE CCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]