Click here to switch to the map view.

The map label for this gene is 78048535

Identifier: 78048535

GI number: 78048535

Start: 3387330

End: 3387731

Strand: Reverse

Name: 78048535

Synonym: XCV2979

Alternate gene names: NA

Gene position: 3387731-3387330 (Counterclockwise)

Preceding gene: 78048536

Following gene: 78048530

Centisome position: 65.42

GC content: 66.17

Gene sequence:

>402_bases
ATGCCACTGACGATCGAGCTGCAGATGCTGGGCTGGGCGATGGTGCTCGGGCTGGTGCAATTGCTGGCCGCCTCGGCCAG
CATGACCGCCCAGCGCGGCACCAAGTGGAATGCCAGCGCACGCGATGGCGAGGCCAAGCCGCTCACCGGCGTGGCGGCGC
GGTTGGACCGTGCGTTTCGCAATTATCTCGAGACCTTTCCGATCTTCGCGGCCGCCGTGCTGGCGGTGAGCGTGGCCGGG
CGCACCAGCGCAGAAACAGCACTCGCCGTGCAGCTCTACCTGTGGGCGCGCGTGGCGTATGTGCCGGTGTATGCCGCGGG
TATTCCGTACCTGCGCAGCGCCATCTGGGTGGTGTCGTTATGGGGCATCATCAAACTGGTGCGCGCACTGCTGGGCATTT
GA

Upstream 100 bases:

>100_bases
CTGGTCTCGTTCCGTCTGGACGAAGACAAGACCTGGCGGTTGGCCGGTTACAGCCTGCGCACGGCGGTGAAGTGATGTTT
CCATCGGCCGGGAGAAACGT

Downstream 100 bases:

>100_bases
TGCAGCGTCGCCGGCGGGTGTGAGCTTCAATCAGTCGCTTGCACCCGCGCCAGGATTGCATCGATGGCCGCCTGCGTATC
GCCGGTATGCAGGGCTTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: Transmembrane Protein

Number of amino acids: Translated: 133; Mature: 132

Protein sequence:

>133_residues
MPLTIELQMLGWAMVLGLVQLLAASASMTAQRGTKWNASARDGEAKPLTGVAARLDRAFRNYLETFPIFAAAVLAVSVAG
RTSAETALAVQLYLWARVAYVPVYAAGIPYLRSAIWVVSLWGIIKLVRALLGI

Sequences:

>Translated_133_residues
MPLTIELQMLGWAMVLGLVQLLAASASMTAQRGTKWNASARDGEAKPLTGVAARLDRAFRNYLETFPIFAAAVLAVSVAG
RTSAETALAVQLYLWARVAYVPVYAAGIPYLRSAIWVVSLWGIIKLVRALLGI
>Mature_132_residues
PLTIELQMLGWAMVLGLVQLLAASASMTAQRGTKWNASARDGEAKPLTGVAARLDRAFRNYLETFPIFAAAVLAVSVAGR
TSAETALAVQLYLWARVAYVPVYAAGIPYLRSAIWVVSLWGIIKLVRALLGI

Specific function: Unknown

COG id: COG3686

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14333; Mature: 14202

Theoretical pI: Translated: 10.58; Mature: 10.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLTIELQMLGWAMVLGLVQLLAASASMTAQRGTKWNASARDGEAKPLTGVAARLDRAFR
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
NYLETFPIFAAAVLAVSVAGRTSAETALAVQLYLWARVAYVPVYAAGIPYLRSAIWVVSL
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WGIIKLVRALLGI
HHHHHHHHHHHCC
>Mature Secondary Structure 
PLTIELQMLGWAMVLGLVQLLAASASMTAQRGTKWNASARDGEAKPLTGVAARLDRAFR
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
NYLETFPIFAAAVLAVSVAGRTSAETALAVQLYLWARVAYVPVYAAGIPYLRSAIWVVSL
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WGIIKLVRALLGI
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA