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The map label for this gene is 78047855

Identifier: 78047855

GI number: 78047855

Start: 2633942

End: 2634583

Strand: Reverse

Name: 78047855

Synonym: XCV2299

Alternate gene names: NA

Gene position: 2634583-2633942 (Counterclockwise)

Preceding gene: 78047857

Following gene: 78047850

Centisome position: 50.88

GC content: 63.08

Gene sequence:

>642_bases
ATGCACGATGCCACCAGCCCGTCCCCCCGTCTTAGGCTTGCGGTAGCACCGGGCGTATCGTCATCTCAACTCTCGGCGCT
TCTCGCGCGTCAACGCGCAGAGGAGCCGGGCGTCACCCTCGCGGTTTTCGAGGTTGCAGGTGACGTCCTGCTTGAGGGGC
TTCTTGAAGGCCGCTATGACGTCGGGATGTCGCTTCAGGGGTATAGCGACCCCGCTCTCAAAACGCAGCTCTTATGGACC
GAGACCATGGCTGTCGCCATGCCGACACGGTTCCACTTATTCGACGAGGCGAAGCTCGCCATCGCCGATCTTCGGGACTA
TCCCGTCTATCGCTGGCAGGCAGAAGCCTGCCCCCTGCTGGATGAGAGGCTGGCCTCCCTCATGCCAGTGGACCAGGAGA
ACCTCCAACGGGTGACTTCCTTCGAGATGATGGCGCTATGGGTCGCAGCGGGCTATGGCGTCGGGGTATCTACGCGATCG
CGCATTGAGCGTGCCCATGAATGGGGAATCACCGTGCGACCGCTCGCCGGCGGTCCCTACGAGATCGCGACATACCTGCA
GCGGCCCCACGCGCATGCCAATTCCACTTCGGAGCGGTTCGAGCGCAGAGCGCTGCAAGTCACCGGGGCTGGCGTCACAT
AG

Upstream 100 bases:

>100_bases
AGAAGCGTCAGGCAGTCACTAGAATTTAACCACGTTAAATTTAACTCATGGGTATCATGTCGGATTGGTTTCTTGATCAA
TTCTCTTCTTGGGGGCTCTT

Downstream 100 bases:

>100_bases
TGGCACCTACGGCCGGGGCCATCATCCCGGCCATAGCTGACGCGCAGGATCAGGCCCCCTCAAACACTACCGCGCTGTCC
ACCAGCCGACGCACGCTCTG

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator LysR Family; Transcriptional Regulator; LysR Regulatory Protein; LysR Family Regulatory Protein; Transcriptional Regulator LysR Family Protein; LysR Family Regulatory Helix-Turn-Helix Protein; Transcriptional Regulator Lysr Family; BphR/TraR; Transcription Regulator Protein; Transcription Regulator; Regulatory Protein BphR

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MHDATSPSPRLRLAVAPGVSSSQLSALLARQRAEEPGVTLAVFEVAGDVLLEGLLEGRYDVGMSLQGYSDPALKTQLLWT
ETMAVAMPTRFHLFDEAKLAIADLRDYPVYRWQAEACPLLDERLASLMPVDQENLQRVTSFEMMALWVAAGYGVGVSTRS
RIERAHEWGITVRPLAGGPYEIATYLQRPHAHANSTSERFERRALQVTGAGVT

Sequences:

>Translated_213_residues
MHDATSPSPRLRLAVAPGVSSSQLSALLARQRAEEPGVTLAVFEVAGDVLLEGLLEGRYDVGMSLQGYSDPALKTQLLWT
ETMAVAMPTRFHLFDEAKLAIADLRDYPVYRWQAEACPLLDERLASLMPVDQENLQRVTSFEMMALWVAAGYGVGVSTRS
RIERAHEWGITVRPLAGGPYEIATYLQRPHAHANSTSERFERRALQVTGAGVT
>Mature_213_residues
MHDATSPSPRLRLAVAPGVSSSQLSALLARQRAEEPGVTLAVFEVAGDVLLEGLLEGRYDVGMSLQGYSDPALKTQLLWT
ETMAVAMPTRFHLFDEAKLAIADLRDYPVYRWQAEACPLLDERLASLMPVDQENLQRVTSFEMMALWVAAGYGVGVSTRS
RIERAHEWGITVRPLAGGPYEIATYLQRPHAHANSTSERFERRALQVTGAGVT

Specific function: Unknown

COG id: COG0583

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23453; Mature: 23453

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHDATSPSPRLRLAVAPGVSSSQLSALLARQRAEEPGVTLAVFEVAGDVLLEGLLEGRYD
CCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHCCCCC
VGMSLQGYSDPALKTQLLWTETMAVAMPTRFHLFDEAKLAIADLRDYPVYRWQAEACPLL
CCCEECCCCCCCHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHCCCCCEEEECCCCCHH
DERLASLMPVDQENLQRVTSFEMMALWVAAGYGVGVSTRSRIERAHEWGITVRPLAGGPY
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEECCCCHH
EIATYLQRPHAHANSTSERFERRALQVTGAGVT
HHHHHHHCCCCCCCCHHHHHHHHHHEEECCCCC
>Mature Secondary Structure
MHDATSPSPRLRLAVAPGVSSSQLSALLARQRAEEPGVTLAVFEVAGDVLLEGLLEGRYD
CCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHCCCCC
VGMSLQGYSDPALKTQLLWTETMAVAMPTRFHLFDEAKLAIADLRDYPVYRWQAEACPLL
CCCEECCCCCCCHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHCCCCCEEEECCCCCHH
DERLASLMPVDQENLQRVTSFEMMALWVAAGYGVGVSTRSRIERAHEWGITVRPLAGGPY
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEECCCCHH
EIATYLQRPHAHANSTSERFERRALQVTGAGVT
HHHHHHHCCCCCCCCHHHHHHHHHHEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA