| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
Click here to switch to the map view.
The map label for this gene is 78047850
Identifier: 78047850
GI number: 78047850
Start: 2629143
End: 2629403
Strand: Reverse
Name: 78047850
Synonym: XCV2294
Alternate gene names: NA
Gene position: 2629403-2629143 (Counterclockwise)
Preceding gene: 78047855
Following gene: 78047849
Centisome position: 50.78
GC content: 65.52
Gene sequence:
>261_bases ATGGCGAACGCACATGAACTGGCCCGTGGCCACGAGCGGCTGCGCGCTCTGATCGAGTTTGCTGTGAGCGAAGGCTGGCA CGTCAAGCGCACACCCGGCGGACACCTCAAGTTCACCAAGGCCGGCTGCGCCGCTATCTACACCAGTTCAACCGCAAGCG ACCACCGGGCAACTCTTAACACCCGCGCGCAGATACGCCGTGCAGAGCGCGAGGCTCGCATGGCACGGGCTGCTAACGCC GAGGGACGCGGCCATGGCTGA
Upstream 100 bases:
>100_bases CTTGATCGGCCTTCTTGTAAGTGTCCGTGAAAACGGGGGTGAACCCGATTTGTCCACGTATCCGGCCGTCCATCGCGTCC TATTGAAACCGGGAGGCCTC
Downstream 100 bases:
>100_bases GATGACGTCCCAGGACATGGCCGGCAAGCTGCTTGCAGCTGGGTTCGAGCGCAGCGGCCCATCGGCCACGGCATTGAGCG ACCCAATCGCCGACACCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 86; Mature: 85
Protein sequence:
>86_residues MANAHELARGHERLRALIEFAVSEGWHVKRTPGGHLKFTKAGCAAIYTSSTASDHRATLNTRAQIRRAEREARMARAANA EGRGHG
Sequences:
>Translated_86_residues MANAHELARGHERLRALIEFAVSEGWHVKRTPGGHLKFTKAGCAAIYTSSTASDHRATLNTRAQIRRAEREARMARAANA EGRGHG >Mature_85_residues ANAHELARGHERLRALIEFAVSEGWHVKRTPGGHLKFTKAGCAAIYTSSTASDHRATLNTRAQIRRAEREARMARAANAE GRGHG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9419; Mature: 9288
Theoretical pI: Translated: 11.63; Mature: 11.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANAHELARGHERLRALIEFAVSEGWHVKRTPGGHLKFTKAGCAAIYTSSTASDHRATLN CCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEECCCCCEEEEECCCCCCHHHHHH TRAQIRRAEREARMARAANAEGRGHG HHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure ANAHELARGHERLRALIEFAVSEGWHVKRTPGGHLKFTKAGCAAIYTSSTASDHRATLN CCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEECCCCCEEEEECCCCCCHHHHHH TRAQIRRAEREARMARAANAEGRGHG HHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA