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The map label for this gene is 78047785

Identifier: 78047785

GI number: 78047785

Start: 2556129

End: 2556671

Strand: Reverse

Name: 78047785

Synonym: XCV2229

Alternate gene names: NA

Gene position: 2556671-2556129 (Counterclockwise)

Preceding gene: 78047789

Following gene: 78047784

Centisome position: 49.37

GC content: 62.98

Gene sequence:

>543_bases
ATGCACATGCCGCCAATGCGCCAAAGGTCATGGTCTATTCAACTTTGCCTATTCACCCGGTTTGCGCCGCGCCAAATCGC
AGGCATACTCGGTCCGGTTCCGTCACGCCCCCACGTGCGGACGCTCAATCAGTCTTCCGGATACGAAACCATGCGCCCGC
AGCCGCTCGCCGCTTGTCTCGCTCTGGTCGTCTTCCTGCCGTTTGGGGGCGCATCAGCAACACCGCAAGCCACACCCGCA
GCTCCGGCCCCCCCGGCACCTGCTGCCGCGGTGGCAACCCCTGCCGCGCCGACCGGCAACCCGTCGAATGGGCGCTTGCT
CGCCTATACCTGCCAGGGTTGCCACGGCGTCACCGGCTATAAGAACGCCTACCCCAGTTATCGCGTGCCCAAGATTGGCG
GCCAGACCAGCCAGTATCTGACCCAGGCGTTGACCGAATATCGCCAGGGCAAGCGCAAGCATCCAACCATGCAGGCGCAG
GCGCAGAGCTTTTCCGAGCAGGACATCGCCGACATCTCCGCCTTTCTGTCCACTCTCAAATAA

Upstream 100 bases:

>100_bases
CGGCGCAGGTTCCGCTGCGACCCGGCAAGAAGGAGAGTGGCGACATCGTCGTGTCCTAGTGGATGCGTGAACAGGTGTTG
TAGGCAAGTAGACCACCCAG

Downstream 100 bases:

>100_bases
GCGCCCACATGCCGAACGCCCTGCACGCTCCGCGTCTAGCCATCGTCCTGGTCGCTGCCCTGATGATGGCGGCCTGTTCC
CAATCCCAGGTTGAGTCCAC

Product: putative cytochrome

Products: NA

Alternate protein names: Cytochrome C; Cytochrome C Class IC; Cytochrome; Cytochrome C Family Protein; Cytochrome C-Type Protein; Cytochrome C Class ICCytochrome C Class I; Class I Cytochrome C; Cytochrome C Family; Cytochrome Protein; Cytochrome C Protein; Periplasmic Cytochrome; Cytochrome C Class Ic

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MHMPPMRQRSWSIQLCLFTRFAPRQIAGILGPVPSRPHVRTLNQSSGYETMRPQPLAACLALVVFLPFGGASATPQATPA
APAPPAPAAAVATPAAPTGNPSNGRLLAYTCQGCHGVTGYKNAYPSYRVPKIGGQTSQYLTQALTEYRQGKRKHPTMQAQ
AQSFSEQDIADISAFLSTLK

Sequences:

>Translated_180_residues
MHMPPMRQRSWSIQLCLFTRFAPRQIAGILGPVPSRPHVRTLNQSSGYETMRPQPLAACLALVVFLPFGGASATPQATPA
APAPPAPAAAVATPAAPTGNPSNGRLLAYTCQGCHGVTGYKNAYPSYRVPKIGGQTSQYLTQALTEYRQGKRKHPTMQAQ
AQSFSEQDIADISAFLSTLK
>Mature_180_residues
MHMPPMRQRSWSIQLCLFTRFAPRQIAGILGPVPSRPHVRTLNQSSGYETMRPQPLAACLALVVFLPFGGASATPQATPA
APAPPAPAAAVATPAAPTGNPSNGRLLAYTCQGCHGVTGYKNAYPSYRVPKIGGQTSQYLTQALTEYRQGKRKHPTMQAQ
AQSFSEQDIADISAFLSTLK

Specific function: Unknown

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19264; Mature: 19264

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHMPPMRQRSWSIQLCLFTRFAPRQIAGILGPVPSRPHVRTLNQSSGYETMRPQPLAACL
CCCCCCCCCCCEEEEEEEHHCCHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCHHHHHH
ALVVFLPFGGASATPQATPAAPAPPAPAAAVATPAAPTGNPSNGRLLAYTCQGCHGVTGY
HHHHHHCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCC
KNAYPSYRVPKIGGQTSQYLTQALTEYRQGKRKHPTMQAQAQSFSEQDIADISAFLSTLK
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MHMPPMRQRSWSIQLCLFTRFAPRQIAGILGPVPSRPHVRTLNQSSGYETMRPQPLAACL
CCCCCCCCCCCEEEEEEEHHCCHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCHHHHHH
ALVVFLPFGGASATPQATPAAPAPPAPAAAVATPAAPTGNPSNGRLLAYTCQGCHGVTGY
HHHHHHCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCC
KNAYPSYRVPKIGGQTSQYLTQALTEYRQGKRKHPTMQAQAQSFSEQDIADISAFLSTLK
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA