Click here to switch to the map view.

The map label for this gene is 78047738

Identifier: 78047738

GI number: 78047738

Start: 2509612

End: 2510511

Strand: Reverse

Name: 78047738

Synonym: XCV2182

Alternate gene names: NA

Gene position: 2510511-2509612 (Counterclockwise)

Preceding gene: 78047739

Following gene: 78047737

Centisome position: 48.48

GC content: 66.11

Gene sequence:

>900_bases
ATGCCAACCACCGAGCTTTTCGACACCACGGCGATCCAAGCCGGCGCGCGCCTGCGCTATTGGAAAGACCTGGTAAGAAC
GGCCTTCGACAACATGGAGATCGAGCCGGCATCGCAACGCTTCTGCGCGCGCATGCAGAGGCGAGGCTTCGGTTCGATGC
ACCTGACCACCGTCGAGTCGACTCCCGTGGCGATCGATTCCAGGCGCAGCAGCAACTACGATGGCGTCTACCTGATGCGC
AACGAGCATGGCAGCTGCGACGTCTATCAGCATGGCCGGCAGGCGCGTTTGCAAGCCGGCGAACTGGTCGTGTTGCGCGC
GCGCGATCCGTATCGCATCGAATGCAGCCGCGATCACCGCACACGCGTGCTCTACCTGCCCGGCACCGATCTGGCCGATC
AGTTGGCTGCGCAGAGCGCCACCGCTTATCGCGGCGAACAGTTCCAGTTGCTCGGCAATTTCATCGCGCATCTCGATCAC
CTCGGCGCCGGGCAGCACGTCTCGACGCTGCTGACCACCGCCTGTGCCCTGTTGGCGCTGACCTGGCCTGCGGCTGCGGG
CACGCATTCGGGAAGGAGCACCGCGCTCGCCTGGCAGGCGCGCCTGCGCCAGCATGTGCATCAGCATCTCGCCGATCCGG
GGCTTGGTGCGCAGAGCATCGCCCGGCATTTCGGCATCACGCCCCGCTATGTGCAACTGCTGTTCGCTGCCGCGCACACC
TCCCTCGGTGCGTATGTGCTCGAACAGCGCCTGCAGTGGGTGGCCGAGCGCCTGCGCGATCCGGTCGCCGCGCCCATCGG
CGAGATCGCGCTGGAGGCGGGCTTCAGCGACGTCTCGCATTTCTGCCGCTGCTTCCGCAGCAGCGCACGTGCCTACCGCA
ACGGCGCAAACGCCGGTTAG

Upstream 100 bases:

>100_bases
GATTGATGCGCCGCAAAACGACAGGGGCGCAATCGCGTGCATCATCTTGCGACCCGCCCCGGGTCAGCCAGCCGTTGCTT
CCGTTCCGGAGGACGTCGCC

Downstream 100 bases:

>100_bases
CGTGCAGCGCCGGATGCCGATTTCGCTCCTGGTCAAGTTTGCTTCGTCGCTCGCCAAGCGCTGCCGCCGTCGCGCTCTCT
AAGCTGCGCGTGCCCATGTC

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator AraC Family; AraC Family Regulatory Helix-Turn-Helix Protein; Transcriptional Regulator AraC Type; AraC/XylS Family Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; AraC/XylS Family Transcription Factor; Helix-Turn-Helix AraC Type

Number of amino acids: Translated: 299; Mature: 298

Protein sequence:

>299_residues
MPTTELFDTTAIQAGARLRYWKDLVRTAFDNMEIEPASQRFCARMQRRGFGSMHLTTVESTPVAIDSRRSSNYDGVYLMR
NEHGSCDVYQHGRQARLQAGELVVLRARDPYRIECSRDHRTRVLYLPGTDLADQLAAQSATAYRGEQFQLLGNFIAHLDH
LGAGQHVSTLLTTACALLALTWPAAAGTHSGRSTALAWQARLRQHVHQHLADPGLGAQSIARHFGITPRYVQLLFAAAHT
SLGAYVLEQRLQWVAERLRDPVAAPIGEIALEAGFSDVSHFCRCFRSSARAYRNGANAG

Sequences:

>Translated_299_residues
MPTTELFDTTAIQAGARLRYWKDLVRTAFDNMEIEPASQRFCARMQRRGFGSMHLTTVESTPVAIDSRRSSNYDGVYLMR
NEHGSCDVYQHGRQARLQAGELVVLRARDPYRIECSRDHRTRVLYLPGTDLADQLAAQSATAYRGEQFQLLGNFIAHLDH
LGAGQHVSTLLTTACALLALTWPAAAGTHSGRSTALAWQARLRQHVHQHLADPGLGAQSIARHFGITPRYVQLLFAAAHT
SLGAYVLEQRLQWVAERLRDPVAAPIGEIALEAGFSDVSHFCRCFRSSARAYRNGANAG
>Mature_298_residues
PTTELFDTTAIQAGARLRYWKDLVRTAFDNMEIEPASQRFCARMQRRGFGSMHLTTVESTPVAIDSRRSSNYDGVYLMRN
EHGSCDVYQHGRQARLQAGELVVLRARDPYRIECSRDHRTRVLYLPGTDLADQLAAQSATAYRGEQFQLLGNFIAHLDHL
GAGQHVSTLLTTACALLALTWPAAAGTHSGRSTALAWQARLRQHVHQHLADPGLGAQSIARHFGITPRYVQLLFAAAHTS
LGAYVLEQRLQWVAERLRDPVAAPIGEIALEAGFSDVSHFCRCFRSSARAYRNGANAG

Specific function: Unknown

COG id: COG2207

COG function: function code K; AraC-type DNA-binding domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33157; Mature: 33026

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTTELFDTTAIQAGARLRYWKDLVRTAFDNMEIEPASQRFCARMQRRGFGSMHLTTVES
CCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEECC
TPVAIDSRRSSNYDGVYLMRNEHGSCDVYQHGRQARLQAGELVVLRARDPYRIECSRDHR
CCEEEECCCCCCCCCEEEEECCCCCCHHHHCCCHHHCCCCCEEEEECCCCEEEEECCCCC
TRVLYLPGTDLADQLAAQSATAYRGEQFQLLGNFIAHLDHLGAGQHVSTLLTTACALLAL
EEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
TWPAAAGTHSGRSTALAWQARLRQHVHQHLADPGLGAQSIARHFGITPRYVQLLFAAAHT
HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHH
SLGAYVLEQRLQWVAERLRDPVAAPIGEIALEAGFSDVSHFCRCFRSSARAYRNGANAG
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PTTELFDTTAIQAGARLRYWKDLVRTAFDNMEIEPASQRFCARMQRRGFGSMHLTTVES
CCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEECC
TPVAIDSRRSSNYDGVYLMRNEHGSCDVYQHGRQARLQAGELVVLRARDPYRIECSRDHR
CCEEEECCCCCCCCCEEEEECCCCCCHHHHCCCHHHCCCCCEEEEECCCCEEEEECCCCC
TRVLYLPGTDLADQLAAQSATAYRGEQFQLLGNFIAHLDHLGAGQHVSTLLTTACALLAL
EEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
TWPAAAGTHSGRSTALAWQARLRQHVHQHLADPGLGAQSIARHFGITPRYVQLLFAAAHT
HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHH
SLGAYVLEQRLQWVAERLRDPVAAPIGEIALEAGFSDVSHFCRCFRSSARAYRNGANAG
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA