| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is yeiH [C]
Identifier: 78047739
GI number: 78047739
Start: 2510694
End: 2511824
Strand: Reverse
Name: yeiH [C]
Synonym: XCV2183
Alternate gene names: 78047739
Gene position: 2511824-2510694 (Counterclockwise)
Preceding gene: 78047741
Following gene: 78047738
Centisome position: 48.51
GC content: 66.05
Gene sequence:
>1131_bases ATGTACAGCACTCCTGCCCCACTCAACCTTTTGCAAGGCCATGCCGCTGGGGCCACCCGGCGCCTGCGCCAGTTGGTGCC CGGTCTTGCATTGACGGGCCTGCTGGCTGGCGCGTCGATGCAGCTGGGCAAGATCGGCGGGCTGCAGGCCAACGGCGTCA GCGCGCTGACCCTGGCCATCCTGCTCGGCATGCTGGCCGGCAACACGTTCTATCCGCGCCTGGCTGCGAACGCCGACCCG GGCGTGCGTTTTTCCAAGGCCACCCTGCTGCGGCTGGGCATCGTCCTGTACGGCCTGCGCCTGACCTTCCAGGACATCGG CAACGTCGGCTGGACTGGCGTTGCCATCGACGCGGCGGTGCTGTGCAGTACCTTCGGCCTCGCCTGTTTCGTTGGCACGC GCGTGTTCGGCCTGGACCGCACCACGGCGATGCTGATCGGTGCGGGTAGCTCGATCTGCGGTGCAGCCGCCGTGATGGCC GCCGAACCCGTCGTCCGCGGCCGCGCCGATCAGGTAATGGTCGCGGTGGCCACGGTGGTGGTGTTCGGCACGCTGGCGAT GTTCCTGTACCCGGTGCTGTATCACCTGGTCGCGCACTCCCGCGGGTTCGCCCTGTCGCCGGCGGCATACGGCGTCTTTG CCGGTTCCACCATCCATGAAGTGGCACAGGTGGTCGCTGCGGGGCGCGCCATTGGCGAGCAGGCCGCAAATACCGCTGTA ATCGCCAAGATGGTGCGGGTGATGCTGCTGGCGCCGTTTCTTATCGCCCTGTCGGCCTATCTTTCTCGAACCAGGGGAAA GCACGCAGATCCCTCAAATTGCGATGGCGGTACCGACCAGAACGCGCGCACGCAGCCCGGCAGCATCGTGATGCCCTGGT TCGCGCTTGGGTTCATCGCGGTTGCGGGACTCAACTCGCTGGCGTTGCTGCCACCGACGCTGGTGCACCAGGCGATCGAC ATCGATACCGTCCTGCTGGCGATGGCCATGGCCGGCCTGGGATTGACGACGCACGTCTCGGCCATCCGCAAGGCCGGCAT CAGGCCGCTGGCGCTTGCAGCCATTCTGTTTGCATGGCTGGTTTGCGGCGGCTTTGCCCTCAATGTGGGCATCACCGCAA TGTTCCATTGA
Upstream 100 bases:
>100_bases CTGTTTTATCGCTAGGTTATAACGAAATTATCCGTTTGTTGGATAGTTCCGGGCAGTCCACAGTGCGCTCCTGCCTGCCG CACGTTGCGATGAAACCACC
Downstream 100 bases:
>100_bases CGTGGAATTCGTGATGGGTGCATCCCATCACGGCATGTGGATCTCACCCCCGCGGAATCAGCCAGGCGCTCGCCAACCTG CAGATTGATGCGCCGCAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 376; Mature: 376
Protein sequence:
>376_residues MYSTPAPLNLLQGHAAGATRRLRQLVPGLALTGLLAGASMQLGKIGGLQANGVSALTLAILLGMLAGNTFYPRLAANADP GVRFSKATLLRLGIVLYGLRLTFQDIGNVGWTGVAIDAAVLCSTFGLACFVGTRVFGLDRTTAMLIGAGSSICGAAAVMA AEPVVRGRADQVMVAVATVVVFGTLAMFLYPVLYHLVAHSRGFALSPAAYGVFAGSTIHEVAQVVAAGRAIGEQAANTAV IAKMVRVMLLAPFLIALSAYLSRTRGKHADPSNCDGGTDQNARTQPGSIVMPWFALGFIAVAGLNSLALLPPTLVHQAID IDTVLLAMAMAGLGLTTHVSAIRKAGIRPLALAAILFAWLVCGGFALNVGITAMFH
Sequences:
>Translated_376_residues MYSTPAPLNLLQGHAAGATRRLRQLVPGLALTGLLAGASMQLGKIGGLQANGVSALTLAILLGMLAGNTFYPRLAANADP GVRFSKATLLRLGIVLYGLRLTFQDIGNVGWTGVAIDAAVLCSTFGLACFVGTRVFGLDRTTAMLIGAGSSICGAAAVMA AEPVVRGRADQVMVAVATVVVFGTLAMFLYPVLYHLVAHSRGFALSPAAYGVFAGSTIHEVAQVVAAGRAIGEQAANTAV IAKMVRVMLLAPFLIALSAYLSRTRGKHADPSNCDGGTDQNARTQPGSIVMPWFALGFIAVAGLNSLALLPPTLVHQAID IDTVLLAMAMAGLGLTTHVSAIRKAGIRPLALAAILFAWLVCGGFALNVGITAMFH >Mature_376_residues MYSTPAPLNLLQGHAAGATRRLRQLVPGLALTGLLAGASMQLGKIGGLQANGVSALTLAILLGMLAGNTFYPRLAANADP GVRFSKATLLRLGIVLYGLRLTFQDIGNVGWTGVAIDAAVLCSTFGLACFVGTRVFGLDRTTAMLIGAGSSICGAAAVMA AEPVVRGRADQVMVAVATVVVFGTLAMFLYPVLYHLVAHSRGFALSPAAYGVFAGSTIHEVAQVVAAGRAIGEQAANTAV IAKMVRVMLLAPFLIALSAYLSRTRGKHADPSNCDGGTDQNARTQPGSIVMPWFALGFIAVAGLNSLALLPPTLVHQAID IDTVLLAMAMAGLGLTTHVSAIRKAGIRPLALAAILFAWLVCGGFALNVGITAMFH
Specific function: Unknown
COG id: COG2855
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0324 family [H]
Homologues:
Organism=Escherichia coli, GI1788482, Length=355, Percent_Identity=54.0845070422535, Blast_Score=344, Evalue=7e-96,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004630 - InterPro: IPR018383 [H]
Pfam domain/function: PF03601 Cons_hypoth698 [H]
EC number: NA
Molecular weight: Translated: 38716; Mature: 38716
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYSTPAPLNLLQGHAAGATRRLRQLVPGLALTGLLAGASMQLGKIGGLQANGVSALTLAI CCCCCCCHHHHHCCCHHHHHHHHHHHCHHHHHHHHHCCCCCHHCCCCCCCCCHHHHHHHH LLGMLAGNTFYPRLAANADPGVRFSKATLLRLGIVLYGLRLTFQDIGNVGWTGVAIDAAV HHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH LCSTFGLACFVGTRVFGLDRTTAMLIGAGSSICGAAAVMAAEPVVRGRADQVMVAVATVV HHHHHHHHHHHHHHHCCCCCHHEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH VFGTLAMFLYPVLYHLVAHSRGFALSPAAYGVFAGSTIHEVAQVVAAGRAIGEQAANTAV HHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH IAKMVRVMLLAPFLIALSAYLSRTRGKHADPSNCDGGTDQNARTQPGSIVMPWFALGFIA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHH VAGLNSLALLPPTLVHQAIDIDTVLLAMAMAGLGLTTHVSAIRKAGIRPLALAAILFAWL HHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHH VCGGFALNVGITAMFH HHCCHHHHHCEEEEEC >Mature Secondary Structure MYSTPAPLNLLQGHAAGATRRLRQLVPGLALTGLLAGASMQLGKIGGLQANGVSALTLAI CCCCCCCHHHHHCCCHHHHHHHHHHHCHHHHHHHHHCCCCCHHCCCCCCCCCHHHHHHHH LLGMLAGNTFYPRLAANADPGVRFSKATLLRLGIVLYGLRLTFQDIGNVGWTGVAIDAAV HHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH LCSTFGLACFVGTRVFGLDRTTAMLIGAGSSICGAAAVMAAEPVVRGRADQVMVAVATVV HHHHHHHHHHHHHHHCCCCCHHEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH VFGTLAMFLYPVLYHLVAHSRGFALSPAAYGVFAGSTIHEVAQVVAAGRAIGEQAANTAV HHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH IAKMVRVMLLAPFLIALSAYLSRTRGKHADPSNCDGGTDQNARTQPGSIVMPWFALGFIA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHH VAGLNSLALLPPTLVHQAIDIDTVLLAMAMAGLGLTTHVSAIRKAGIRPLALAAILFAWL HHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHH VCGGFALNVGITAMFH HHCCHHHHHCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 14528314 [H]