| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78047610
Identifier: 78047610
GI number: 78047610
Start: 2337499
End: 2338620
Strand: Reverse
Name: 78047610
Synonym: XCV2054
Alternate gene names: NA
Gene position: 2338620-2337499 (Counterclockwise)
Preceding gene: 78047611
Following gene: 78047609
Centisome position: 45.16
GC content: 66.22
Gene sequence:
>1122_bases ATGGGCATAACCGCACGCTGGTGTCGCCAGCTGGACGAGTTGCCGGCCGGCGCCTGGGATGCGCTGCACGATGGCACGCA TCCCTTTATCAGCTACGCATTTCTGCAAGGCCTTGAACGTGAGGGTTGCCTGCGCCCGGATTGGGGATGGAACCCGCTGC ACCTGACCTTGTGGGAGGGTGACACTCTGGTCGCCGCGGCTCCCGGCTACCTCAAGAACAACTCGCACGGCGAGTTCGTC TTCGACCATGCCTGGGCGCATGCGTACGCGCGCTATGGCCAGGACTACTTCCCCAAATGGCTGTGTGGGGTGCCCTACTC GCCCGTCACCGGCCCGCGCCTGCTCGGTGCGCCCACGTGGCGCGGCCACCTGCTGAAGGCGATGCGCGAGCTGGTGGAGC GCAGCGGACTGTCGTCGGCGCATGTGAACTTTTACCCCGCTGGTGAAGACGCCGCCTTCGATGCCGACTGGCTGGAACGC AACGACCTGCAGTACCACTGGCACAACGCCAGCGGCTGGGGCGACTTCGAGACGTTCCTGTCGGCGATGGATCACAAGCA CCGCAAGAACATTCGCCAGGAACGCGCCAAGGTGCAGCGCGCCGGCGTGCAACTGCGCGTGGTGCACGGTGATGAGGCCA GCGATGCGGAGCTGGCCGCGATGTACGGCTTTTATCTCAAGACCTTCAACGAGTACGGCAACTCGCCCGCGCTGACGCCG CAGTTCCTGCAGCACCTGGCCACGGCCATGCCGCGCCAGCTGGTGATGTTCCTGGCCGACCTCGATGGGCAACCCATCGC CGGTGCACTCTGCCTGCGCGGGCAGCACACTTTGTACGGCCGCTACTGGGGCGGTGAAGCCCTGCCCGGCCTGCATTTCG AGACCTGCTACTACCAGGGCATCGAATATTGCCTGCGCGAAGGCCTGACCCGCTTCGAACCTGGCGCACAAGGCCAGCAC AAGATCGCGCGCGGCTTTCTGCCGACGCTGGTGCGCAGCCGCCACTGGATTGCCGATCCGGGCTTTCGCGAGCCGCTGGC GGACTGGTGCGCGCAAGAGCGGGCCGAGGTCGAGCAGCACGCCGCCGCCCTGCTGCGCCATTCGCCGTTCCGCCAAGCGT GA
Upstream 100 bases:
>100_bases GGCCGCGCTGGATGCCGAGCGTTATCTCGACAAGAGCGCCTGAGATGGCGCCTGATTGCCGGCCGCGCCACGCGGCCAGC ATCGCCAAGGGGCTGCCCGC
Downstream 100 bases:
>100_bases TCGCCCTGCGGCGGCTTCTCCACCCATCCCGGGTCGATACATCGCACCGCCGCCGCACAAATCCAGGCACCGCCTGACGT GGCAGGCCGACGTGGCAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 373; Mature: 372
Protein sequence:
>373_residues MGITARWCRQLDELPAGAWDALHDGTHPFISYAFLQGLEREGCLRPDWGWNPLHLTLWEGDTLVAAAPGYLKNNSHGEFV FDHAWAHAYARYGQDYFPKWLCGVPYSPVTGPRLLGAPTWRGHLLKAMRELVERSGLSSAHVNFYPAGEDAAFDADWLER NDLQYHWHNASGWGDFETFLSAMDHKHRKNIRQERAKVQRAGVQLRVVHGDEASDAELAAMYGFYLKTFNEYGNSPALTP QFLQHLATAMPRQLVMFLADLDGQPIAGALCLRGQHTLYGRYWGGEALPGLHFETCYYQGIEYCLREGLTRFEPGAQGQH KIARGFLPTLVRSRHWIADPGFREPLADWCAQERAEVEQHAAALLRHSPFRQA
Sequences:
>Translated_373_residues MGITARWCRQLDELPAGAWDALHDGTHPFISYAFLQGLEREGCLRPDWGWNPLHLTLWEGDTLVAAAPGYLKNNSHGEFV FDHAWAHAYARYGQDYFPKWLCGVPYSPVTGPRLLGAPTWRGHLLKAMRELVERSGLSSAHVNFYPAGEDAAFDADWLER NDLQYHWHNASGWGDFETFLSAMDHKHRKNIRQERAKVQRAGVQLRVVHGDEASDAELAAMYGFYLKTFNEYGNSPALTP QFLQHLATAMPRQLVMFLADLDGQPIAGALCLRGQHTLYGRYWGGEALPGLHFETCYYQGIEYCLREGLTRFEPGAQGQH KIARGFLPTLVRSRHWIADPGFREPLADWCAQERAEVEQHAAALLRHSPFRQA >Mature_372_residues GITARWCRQLDELPAGAWDALHDGTHPFISYAFLQGLEREGCLRPDWGWNPLHLTLWEGDTLVAAAPGYLKNNSHGEFVF DHAWAHAYARYGQDYFPKWLCGVPYSPVTGPRLLGAPTWRGHLLKAMRELVERSGLSSAHVNFYPAGEDAAFDADWLERN DLQYHWHNASGWGDFETFLSAMDHKHRKNIRQERAKVQRAGVQLRVVHGDEASDAELAAMYGFYLKTFNEYGNSPALTPQ FLQHLATAMPRQLVMFLADLDGQPIAGALCLRGQHTLYGRYWGGEALPGLHFETCYYQGIEYCLREGLTRFEPGAQGQHK IARGFLPTLVRSRHWIADPGFREPLADWCAQERAEVEQHAAALLRHSPFRQA
Specific function: Unknown
COG id: COG3146
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42327; Mature: 42196
Theoretical pI: Translated: 6.76; Mature: 6.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGITARWCRQLDELPAGAWDALHDGTHPFISYAFLQGLEREGCLRPDWGWNPLHLTLWEG CCCCHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECC DTLVAAAPGYLKNNSHGEFVFDHAWAHAYARYGQDYFPKWLCGVPYSPVTGPRLLGAPTW CEEEEECCCCCCCCCCCCEEEHHHHHHHHHHHCHHHCCHHHHCCCCCCCCCCHHCCCCCH RGHLLKAMRELVERSGLSSAHVNFYPAGEDAAFDADWLERNDLQYHWHNASGWGDFETFL HHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHCCCCCEEEECCCCCCCHHHHHH SAMDHKHRKNIRQERAKVQRAGVQLRVVHGDEASDAELAAMYGFYLKTFNEYGNSPALTP HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCH QFLQHLATAMPRQLVMFLADLDGQPIAGALCLRGQHTLYGRYWGGEALPGLHFETCYYQG HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEECCCCEEEEEECCCCCCCCCCHHHHHHHH IEYCLREGLTRFEPGAQGQHKIARGFLPTLVRSRHWIADPGFREPLADWCAQERAEVEQH HHHHHHHCHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH AAALLRHSPFRQA HHHHHHCCCCCCC >Mature Secondary Structure GITARWCRQLDELPAGAWDALHDGTHPFISYAFLQGLEREGCLRPDWGWNPLHLTLWEG CCCHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECC DTLVAAAPGYLKNNSHGEFVFDHAWAHAYARYGQDYFPKWLCGVPYSPVTGPRLLGAPTW CEEEEECCCCCCCCCCCCEEEHHHHHHHHHHHCHHHCCHHHHCCCCCCCCCCHHCCCCCH RGHLLKAMRELVERSGLSSAHVNFYPAGEDAAFDADWLERNDLQYHWHNASGWGDFETFL HHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHCCCCCEEEECCCCCCCHHHHHH SAMDHKHRKNIRQERAKVQRAGVQLRVVHGDEASDAELAAMYGFYLKTFNEYGNSPALTP HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCH QFLQHLATAMPRQLVMFLADLDGQPIAGALCLRGQHTLYGRYWGGEALPGLHFETCYYQG HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEECCCCEEEEEECCCCCCCCCCHHHHHHHH IEYCLREGLTRFEPGAQGQHKIARGFLPTLVRSRHWIADPGFREPLADWCAQERAEVEQH HHHHHHHCHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH AAALLRHSPFRQA HHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA