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The map label for this gene is soj [H]

Identifier: 78047516

GI number: 78047516

Start: 2234080

End: 2234862

Strand: Reverse

Name: soj [H]

Synonym: XCV1960

Alternate gene names: 78047516

Gene position: 2234862-2234080 (Counterclockwise)

Preceding gene: 78047517

Following gene: 78047515

Centisome position: 43.16

GC content: 70.11

Gene sequence:

>783_bases
ATGCGTATCTGGGCAATCGCCAACCAAAAGGGCGGCGTCGGCAAGACCACCACGACGCTGGCATTGGGTCGCGGCCTGGC
CGCGCTCGGCCACCGCGTCTTGTTGATCGACCTCGATCCGCACTCCTCGCTCACCCGCGCCTTCGGCGTGGCGATCGACC
CGCCGCCGCGCGGGGTGCTGGACCTGTTCGGCACTCCGCCAAGCGACCTGGCCAGCCTGGCGCATGAAAGCAGCATTCCG
GGCCTGTCGTATGTGTGCGCGCAAGCCGCATTGGCCACGCTGGAACGCCGCAGCGCCAACCAGCCCGGCCTGGGCCTGGC
GCTGCAGAACGCCATGACCCGGCATGCCGGCCAGCACGACTACATCCTGCTGGACTGCCCGCCAACCCTGGGCCTGCTGA
TGATCAACGCACTGGCCGCCTGCGACCGCGTGGTGGTGCCGACCCAGGCCGAGCCGCTTGCCCTGCATGGCCTGGCCAGC
ATGGTGCGCACCGCCGACATGGTGCAGCGCTCGCGCCGGCGCGAGCTGCCGGTGTCGATCCTGCCTACGCTGTTCGACCG
CCGCACCCGCGCCGGCACCGAAACGCTGAAGGAAATGCAGGCCACCTACGGCCCGGTCGTCTGGGAAGACGCGGTGCCGG
TGGACACCCGAATCTGCAACGCCGCCGCCCTGACCGTGCCCGCCGTTGGCGGCGACTATCCGGGCCGCGGCCTGTCCGCG
TATCGCCGCGCGCTGGAATGGGTGCTGGCCGATGACGCGATGCGTATGGAGCAAGCCGCATGA

Upstream 100 bases:

>100_bases
GGGGCGCCCAAGCTTCCCAAGTCTGACGGCGGCCAAACGGCCGTCACCACCGAAAGCGGCACAAGTTCCGTCCCCGCCGT
AATTCAAGGAGTGCAGTGAC

Downstream 100 bases:

>100_bases
GCAACCCCACCGCCAACGGTGAATTGGACGATTATCTGGAAGGCCTGCTGCACGATGCGGGCGTGGAGAGCGTTGCCCCA
CCTGCGGCCACCGCAGCCAC

Product: ParA family ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MRIWAIANQKGGVGKTTTTLALGRGLAALGHRVLLIDLDPHSSLTRAFGVAIDPPPRGVLDLFGTPPSDLASLAHESSIP
GLSYVCAQAALATLERRSANQPGLGLALQNAMTRHAGQHDYILLDCPPTLGLLMINALAACDRVVVPTQAEPLALHGLAS
MVRTADMVQRSRRRELPVSILPTLFDRRTRAGTETLKEMQATYGPVVWEDAVPVDTRICNAAALTVPAVGGDYPGRGLSA
YRRALEWVLADDAMRMEQAA

Sequences:

>Translated_260_residues
MRIWAIANQKGGVGKTTTTLALGRGLAALGHRVLLIDLDPHSSLTRAFGVAIDPPPRGVLDLFGTPPSDLASLAHESSIP
GLSYVCAQAALATLERRSANQPGLGLALQNAMTRHAGQHDYILLDCPPTLGLLMINALAACDRVVVPTQAEPLALHGLAS
MVRTADMVQRSRRRELPVSILPTLFDRRTRAGTETLKEMQATYGPVVWEDAVPVDTRICNAAALTVPAVGGDYPGRGLSA
YRRALEWVLADDAMRMEQAA
>Mature_260_residues
MRIWAIANQKGGVGKTTTTLALGRGLAALGHRVLLIDLDPHSSLTRAFGVAIDPPPRGVLDLFGTPPSDLASLAHESSIP
GLSYVCAQAALATLERRSANQPGLGLALQNAMTRHAGQHDYILLDCPPTLGLLMINALAACDRVVVPTQAEPLALHGLAS
MVRTADMVQRSRRRELPVSILPTLFDRRTRAGTETLKEMQATYGPVVWEDAVPVDTRICNAAALTVPAVGGDYPGRGLSA
YRRALEWVLADDAMRMEQAA

Specific function: Inhibits the initiation of sporulation, spo0J antagonizes this inhibition. Soj ultimately inhibits the activation (phosphorylation) of spo0A. It is not required for chromosome partitioning [H]

COG id: COG1192

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586
- InterPro:   IPR000392 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 27756; Mature: 27756

Theoretical pI: Translated: 7.99; Mature: 7.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIWAIANQKGGVGKTTTTLALGRGLAALGHRVLLIDLDPHSSLTRAFGVAIDPPPRGVL
CEEEEEECCCCCCCCHHHHHHHHCCHHHHCCEEEEEEECCCHHHHHHHCCEECCCCCCHH
DLFGTPPSDLASLAHESSIPGLSYVCAQAALATLERRSANQPGLGLALQNAMTRHAGQHD
HCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCC
YILLDCPPTLGLLMINALAACDRVVVPTQAEPLALHGLASMVRTADMVQRSRRRELPVSI
EEEEECCCHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LPTLFDRRTRAGTETLKEMQATYGPVVWEDAVPVDTRICNAAALTVPAVGGDYPGRGLSA
HHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHCHHHEEECCCCCCCCCCCHHH
YRRALEWVLADDAMRMEQAA
HHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRIWAIANQKGGVGKTTTTLALGRGLAALGHRVLLIDLDPHSSLTRAFGVAIDPPPRGVL
CEEEEEECCCCCCCCHHHHHHHHCCHHHHCCEEEEEEECCCHHHHHHHCCEECCCCCCHH
DLFGTPPSDLASLAHESSIPGLSYVCAQAALATLERRSANQPGLGLALQNAMTRHAGQHD
HCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCC
YILLDCPPTLGLLMINALAACDRVVVPTQAEPLALHGLASMVRTADMVQRSRRRELPVSI
EEEEECCCHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LPTLFDRRTRAGTETLKEMQATYGPVVWEDAVPVDTRICNAAALTVPAVGGDYPGRGLSA
HHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHCHHHEEECCCCCCCCCCCHHH
YRRALEWVLADDAMRMEQAA
HHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1552862; 7584024; 9384377; 8071208 [H]