| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is cheW2 [H]
Identifier: 78047515
GI number: 78047515
Start: 2232809
End: 2234083
Strand: Reverse
Name: cheW2 [H]
Synonym: XCV1959
Alternate gene names: 78047515
Gene position: 2234083-2232809 (Counterclockwise)
Preceding gene: 78047516
Following gene: 78047514
Centisome position: 43.14
GC content: 70.12
Gene sequence:
>1275_bases ATGAGCAACCCCACCGCCAACGGTGAATTGGACGATTATCTGGAAGGCCTGCTGCACGATGCGGGCGTGGAGAGCGTTGC CCCACCTGCGGCCACCGCAGCCACGGTCGAAACGCCGGCACTTGCGCATGCAGATCTTGCGCTGGCCGAGCCGCCGGTCG AGACGGCCGCACTTCCCGAAGCCGCTACCGTCTCCGAAGCTGCCACCTCCAACGCGATTGCCGCAGCGCGCAGCGCCGAT GCGATCGCCGCCGATTTCCTGGCAGAAATGGACGCCGACCCGGCCTTCGCACCGCCGGTCAAGGCCGCGCCCAGCGCTGC CGACATTGCCGCCGACTTCCTGGCCGAAATGGACGCCGACCCGGCCTTCGCACCGCCGGTCAAGGCCGCGCCCAGCGCCG CCGACATCGCTGCCGACTTCCTGGCCGAAATGGACGCCGACCCGGCGTTCGCACCGCCGGTCAACGCCGCACCCAGCGCC GCCGACATCGCTGCCGACTTCCTGGCCGAAATGGACGCCGACCCGGCATTCGCCCCGCCGGCCAAGGCCGCGCCCAGCGC CGCCGACATCGCCGCCGACTTCCTGGCCGAAATGGATGCCGATCCGGCGTTCGGAACCGCGCCCACTGCAGTGGACCTGA TCACCGCCGATCTGCTGGCAGAAATGGATGCCGACCCGGCCTTCGGGCTGGAGGCCGCACCGGTCGCGGTGCCTGCACCC GCCCCGGCACCGGCGCCCGCCCCGGCCCCCCGTGCGGCACCGGCGCCGGCACGCGCGCCGGCACCGACCGGGCTGCAGGC ACTGCTGGCACCCGGCCAGGCCGACAAGATTCACGCCGAACGCCGCGCCAGCGAACGCAGCACCCGCTGGCTGCGTCTGC GCTGCGGCGAGCAGACCTATGCGCTGGAATTGCTCAAGGTGCAGGAAGTGGTGCTGCCGGTGCCGCTGCTGCCGCTGCGC GGCACGCCCAGCGCCATGCTGGGCATCATGAACCTGCGGGGCCAGGTGGTCCCGGTGATCGATCTGGGCATCCACCTGGG CTCTTCGCCGGTGGACATGGACCTGCAGACCCGCGTGGTGGTGCTGGAAGAAAACGGCGAAACCATGGGCCTGCGCGTGT CGGCCGTGGAAGACGTCACCAGCCTCACCGATCAGCAGATCGAGCCGCCGGACAACGCCCGGCTGTGCCGCATCTACAAC AACCTGTTCCGCGGTGTCGCACGTCTGGGCCATCAGCCGATGATCCTGCTCGATGCCACCCATCTGCTGCATTGA
Upstream 100 bases:
>100_bases CCGCCGTTGGCGGCGACTATCCGGGCCGCGGCCTGTCCGCGTATCGCCGCGCGCTGGAATGGGTGCTGGCCGATGACGCG ATGCGTATGGAGCAAGCCGC
Downstream 100 bases:
>100_bases TGCGCGCCTAGCTTGCTCGCACCTGCACGCACAACGATTCACCGTTAAAGCTTTTCCGCCCCCCGCCGTTAGTACGCATA GAACCATCCGTTCGGAGCAA
Product: chemotaxis signal transduction protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 424; Mature: 423
Protein sequence:
>424_residues MSNPTANGELDDYLEGLLHDAGVESVAPPAATAATVETPALAHADLALAEPPVETAALPEAATVSEAATSNAIAAARSAD AIAADFLAEMDADPAFAPPVKAAPSAADIAADFLAEMDADPAFAPPVKAAPSAADIAADFLAEMDADPAFAPPVNAAPSA ADIAADFLAEMDADPAFAPPAKAAPSAADIAADFLAEMDADPAFGTAPTAVDLITADLLAEMDADPAFGLEAAPVAVPAP APAPAPAPAPRAAPAPARAPAPTGLQALLAPGQADKIHAERRASERSTRWLRLRCGEQTYALELLKVQEVVLPVPLLPLR GTPSAMLGIMNLRGQVVPVIDLGIHLGSSPVDMDLQTRVVVLEENGETMGLRVSAVEDVTSLTDQQIEPPDNARLCRIYN NLFRGVARLGHQPMILLDATHLLH
Sequences:
>Translated_424_residues MSNPTANGELDDYLEGLLHDAGVESVAPPAATAATVETPALAHADLALAEPPVETAALPEAATVSEAATSNAIAAARSAD AIAADFLAEMDADPAFAPPVKAAPSAADIAADFLAEMDADPAFAPPVKAAPSAADIAADFLAEMDADPAFAPPVNAAPSA ADIAADFLAEMDADPAFAPPAKAAPSAADIAADFLAEMDADPAFGTAPTAVDLITADLLAEMDADPAFGLEAAPVAVPAP APAPAPAPAPRAAPAPARAPAPTGLQALLAPGQADKIHAERRASERSTRWLRLRCGEQTYALELLKVQEVVLPVPLLPLR GTPSAMLGIMNLRGQVVPVIDLGIHLGSSPVDMDLQTRVVVLEENGETMGLRVSAVEDVTSLTDQQIEPPDNARLCRIYN NLFRGVARLGHQPMILLDATHLLH >Mature_423_residues SNPTANGELDDYLEGLLHDAGVESVAPPAATAATVETPALAHADLALAEPPVETAALPEAATVSEAATSNAIAAARSADA IAADFLAEMDADPAFAPPVKAAPSAADIAADFLAEMDADPAFAPPVKAAPSAADIAADFLAEMDADPAFAPPVNAAPSAA DIAADFLAEMDADPAFAPPAKAAPSAADIAADFLAEMDADPAFGTAPTAVDLITADLLAEMDADPAFGLEAAPVAVPAPA PAPAPAPAPRAAPAPARAPAPTGLQALLAPGQADKIHAERRASERSTRWLRLRCGEQTYALELLKVQEVVLPVPLLPLRG TPSAMLGIMNLRGQVVPVIDLGIHLGSSPVDMDLQTRVVVLEENGETMGLRVSAVEDVTSLTDQQIEPPDNARLCRIYNN LFRGVARLGHQPMILLDATHLLH
Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. It physically bridges CheA to the MCPs (methyl-accepting chemotaxis proteins) to allow regulated phosphotransfer to CheY and CheB [H]
COG id: COG0835
COG function: function code NT; Chemotaxis signal transduction protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cheW-like domain [H]
Homologues:
Organism=Escherichia coli, GI1788196, Length=149, Percent_Identity=33.5570469798658, Blast_Score=75, Evalue=9e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002545 [H]
Pfam domain/function: PF01584 CheW [H]
EC number: NA
Molecular weight: Translated: 43384; Mature: 43253
Theoretical pI: Translated: 3.95; Mature: 3.95
Prosite motif: PS50851 CHEW
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNPTANGELDDYLEGLLHDAGVESVAPPAATAATVETPALAHADLALAEPPVETAALPE CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCHHHCCHHHCCCCCHHHCCCC AATVSEAATSNAIAAARSADAIAADFLAEMDADPAFAPPVKAAPSAADIAADFLAEMDAD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC PAFAPPVKAAPSAADIAADFLAEMDADPAFAPPVNAAPSAADIAADFLAEMDADPAFAPP CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC AKAAPSAADIAADFLAEMDADPAFGTAPTAVDLITADLLAEMDADPAFGLEAAPVAVPAP CCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCC APAPAPAPAPRAAPAPARAPAPTGLQALLAPGQADKIHAERRASERSTRWLRLRCGEQTY CCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHCEEEEEEECCHHH ALELLKVQEVVLPVPLLPLRGTPSAMLGIMNLRGQVVPVIDLGIHLGSSPVDMDLQTRVV HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECEECCCCCCCCCCCEEEE VLEENGETMGLRVSAVEDVTSLTDQQIEPPDNARLCRIYNNLFRGVARLGHQPMILLDAT EEECCCCEEEEEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECH HLLH HHCC >Mature Secondary Structure SNPTANGELDDYLEGLLHDAGVESVAPPAATAATVETPALAHADLALAEPPVETAALPE CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCHHHCCHHHCCCCCHHHCCCC AATVSEAATSNAIAAARSADAIAADFLAEMDADPAFAPPVKAAPSAADIAADFLAEMDAD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC PAFAPPVKAAPSAADIAADFLAEMDADPAFAPPVNAAPSAADIAADFLAEMDADPAFAPP CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC AKAAPSAADIAADFLAEMDADPAFGTAPTAVDLITADLLAEMDADPAFGLEAAPVAVPAP CCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCC APAPAPAPAPRAAPAPARAPAPTGLQALLAPGQADKIHAERRASERSTRWLRLRCGEQTY CCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHCEEEEEEECCHHH ALELLKVQEVVLPVPLLPLRGTPSAMLGIMNLRGQVVPVIDLGIHLGSSPVDMDLQTRVV HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECEECCCCCCCCCCCEEEE VLEENGETMGLRVSAVEDVTSLTDQQIEPPDNARLCRIYNNLFRGVARLGHQPMILLDAT EEECCCCEEEEEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECH HLLH HHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]