Click here to switch to the map view.

The map label for this gene is 78046752

Identifier: 78046752

GI number: 78046752

Start: 1338223

End: 1339776

Strand: Reverse

Name: 78046752

Synonym: XCV1196

Alternate gene names: NA

Gene position: 1339776-1338223 (Counterclockwise)

Preceding gene: 78046755

Following gene: 78046737

Centisome position: 25.87

GC content: 63.64

Gene sequence:

>1554_bases
ATGAAACAGATCTCCGGCAACTTCACTCTCCCTTCCACGGCGCTGCGCGCAGACGCAGAGCGCGATGCGCCCGAAACTGC
ACAGGCGCCCGAACCACACACCCCGCCCCATCCTGTCGCAGACCATCCGCTCAACCTGCTGGAAAAAAGAAGAAGCATCA
CCGGCGTACTTGCCGACGAACGTAAGCGTCTGGAAGTCGTGGTGCCCCGCCTGCAGGCAGCGTTGGCACCGCACACCTGG
TCCTCATCCAGTAGCGACTCGCCAACGACGCCTGTCACCGGCCGCAGCCCCCGTCTGGGCCCGCAACCCGGCTCACCGAC
CTGGGCCTGTCTGCTGGAGACGCCGGCGCGCCTGTCGGCCCTTGCGGGCGCCGACAGCAGTGACGCATTCCAGAACTTGC
GCAACGCACGGCGGCTGGTCAGCGATACGCGTCATGCCCGGCAGCACGTCGTGCTGAGCCCGCGCCTGGTGAAATCGCTG
ACCAGCCGCTCCGAACGCCCGGACTTGATCCAGAAGCTCTCGGCGTTGAAGCCCGGCGCCCTGGATGTAGACAATGGATT
TCTCCACGTAACCCTGGAAACCGGGCACGCAGGCACTGCAGGAACGCTGGACGCCATGCCCACCGTCGGCACCGGCGCAT
CCGCCTCGACCTACGCGGTGCGGCTGGCCGAAGATCTTTGGCAGGGCGGGCAAAATTGCGGACGCGACTTCATCTTCAAG
GCCTTGTTGCGCACCGACCCGCAACGGCCGATCCCGCCGACATTGTGCGACCCTGCCACCGCTGCAGACGCACCGGCGCT
GCAGCAACGGGTCGCTGAGCGCAAAGCCATGATCTTCCAGGAGTATCAAATGATCAGGTCGGTGGATGCAGTGCCGTATA
TCGTGCGCGCCCACGGCGTGGTGCAGATCGAACACACCTTCGGCATTTTGCTGGAGAAAATCGACGGCATCAGCGTGCGC
AGCATGATTGGCCGCGCACGCACAGCGCTGCAGCAAGGCGCCATCAGCGCAATGGAGTATCTCGGCCTGGCCCGGCAGCT
GATGGCCGACGTACTGGTGGGGATCGCCTGCTGCGAAGACGCCGGCATCGTGCATCAGGACATCTCGCACAACAACGTCA
TGTACGACCAACCCATGAAGATCTTCCGGCTGATCGACATGGGGCTCGGCGCAGAAGAAGGCGACCCTAACCGCGGCGGC
ACACCGGGCTTCTACGACTTGAGCACCCCTGCCAGGCATGCGCGCGACGTCTACAGCGTGGCGCAATTGCTGGTGCATGT
GCTCAAGCGCCCCGACTACAACATGGGCATGATCGGGATCAATCGCGCCAAGACCGCAGACACCTTCCCCTTCATGGATG
CGTTGCAGGCTCTCCCGGCCGACCACAAGCGCATTGTGGTCCGCTTCTTCAACAGCATGCTGGACGACGGAACCGGCGAG
CGCACCAAGGCAGAGAGACTGCTGCGCGACCCCTTTTTCACCGAACCGCCGCTCCCGCCCCGTGATCGGATGCACCGCAC
CTACGAAAAACTGAAGCGCTTGCCTTCTTTTTAG

Upstream 100 bases:

>100_bases
TGAGTGGCCCCTGGTGCCAGCGGCTCACTCCAGCTGCCGCGTGTTGCAAGCGAATCGCCAGAGCCACCTCCCCTGATCGT
TGACCACACTGTCCTCGACC

Downstream 100 bases:

>100_bases
CAGCAATTATTTTCAGCAGCGCCCACGGTTACAGGCAAGCGCGAGCCGATGGACCACGTAGGGTGTAGTGACCGCGCCTA
GGAAGCGCGGGATTGAAAGA

Product: putative serine/threonine protein kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 517; Mature: 517

Protein sequence:

>517_residues
MKQISGNFTLPSTALRADAERDAPETAQAPEPHTPPHPVADHPLNLLEKRRSITGVLADERKRLEVVVPRLQAALAPHTW
SSSSSDSPTTPVTGRSPRLGPQPGSPTWACLLETPARLSALAGADSSDAFQNLRNARRLVSDTRHARQHVVLSPRLVKSL
TSRSERPDLIQKLSALKPGALDVDNGFLHVTLETGHAGTAGTLDAMPTVGTGASASTYAVRLAEDLWQGGQNCGRDFIFK
ALLRTDPQRPIPPTLCDPATAADAPALQQRVAERKAMIFQEYQMIRSVDAVPYIVRAHGVVQIEHTFGILLEKIDGISVR
SMIGRARTALQQGAISAMEYLGLARQLMADVLVGIACCEDAGIVHQDISHNNVMYDQPMKIFRLIDMGLGAEEGDPNRGG
TPGFYDLSTPARHARDVYSVAQLLVHVLKRPDYNMGMIGINRAKTADTFPFMDALQALPADHKRIVVRFFNSMLDDGTGE
RTKAERLLRDPFFTEPPLPPRDRMHRTYEKLKRLPSF

Sequences:

>Translated_517_residues
MKQISGNFTLPSTALRADAERDAPETAQAPEPHTPPHPVADHPLNLLEKRRSITGVLADERKRLEVVVPRLQAALAPHTW
SSSSSDSPTTPVTGRSPRLGPQPGSPTWACLLETPARLSALAGADSSDAFQNLRNARRLVSDTRHARQHVVLSPRLVKSL
TSRSERPDLIQKLSALKPGALDVDNGFLHVTLETGHAGTAGTLDAMPTVGTGASASTYAVRLAEDLWQGGQNCGRDFIFK
ALLRTDPQRPIPPTLCDPATAADAPALQQRVAERKAMIFQEYQMIRSVDAVPYIVRAHGVVQIEHTFGILLEKIDGISVR
SMIGRARTALQQGAISAMEYLGLARQLMADVLVGIACCEDAGIVHQDISHNNVMYDQPMKIFRLIDMGLGAEEGDPNRGG
TPGFYDLSTPARHARDVYSVAQLLVHVLKRPDYNMGMIGINRAKTADTFPFMDALQALPADHKRIVVRFFNSMLDDGTGE
RTKAERLLRDPFFTEPPLPPRDRMHRTYEKLKRLPSF
>Mature_517_residues
MKQISGNFTLPSTALRADAERDAPETAQAPEPHTPPHPVADHPLNLLEKRRSITGVLADERKRLEVVVPRLQAALAPHTW
SSSSSDSPTTPVTGRSPRLGPQPGSPTWACLLETPARLSALAGADSSDAFQNLRNARRLVSDTRHARQHVVLSPRLVKSL
TSRSERPDLIQKLSALKPGALDVDNGFLHVTLETGHAGTAGTLDAMPTVGTGASASTYAVRLAEDLWQGGQNCGRDFIFK
ALLRTDPQRPIPPTLCDPATAADAPALQQRVAERKAMIFQEYQMIRSVDAVPYIVRAHGVVQIEHTFGILLEKIDGISVR
SMIGRARTALQQGAISAMEYLGLARQLMADVLVGIACCEDAGIVHQDISHNNVMYDQPMKIFRLIDMGLGAEEGDPNRGG
TPGFYDLSTPARHARDVYSVAQLLVHVLKRPDYNMGMIGINRAKTADTFPFMDALQALPADHKRIVVRFFNSMLDDGTGE
RTKAERLLRDPFFTEPPLPPRDRMHRTYEKLKRLPSF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56713; Mature: 56713

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: PS00107 PROTEIN_KINASE_ATP ; PS00109 PROTEIN_KINASE_TYR ; PS50011 PROTEIN_KINASE_DOM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQISGNFTLPSTALRADAERDAPETAQAPEPHTPPHPVADHPLNLLEKRRSITGVLADE
CCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
RKRLEVVVPRLQAALAPHTWSSSSSDSPTTPVTGRSPRLGPQPGSPTWACLLETPARLSA
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHH
LAGADSSDAFQNLRNARRLVSDTRHARQHVVLSPRLVKSLTSRSERPDLIQKLSALKPGA
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHCCCCCHHHHHHHHHCCCCC
LDVDNGFLHVTLETGHAGTAGTLDAMPTVGTGASASTYAVRLAEDLWQGGQNCGRDFIFK
EECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHCCHHHHHH
ALLRTDPQRPIPPTLCDPATAADAPALQQRVAERKAMIFQEYQMIRSVDAVPYIVRAHGV
HHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEECCCE
VQIEHTFGILLEKIDGISVRSMIGRARTALQQGAISAMEYLGLARQLMADVLVGIACCED
EEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
AGIVHQDISHNNVMYDQPMKIFRLIDMGLGAEEGDPNRGGTPGFYDLSTPARHARDVYSV
CCCHHHCCCCCCCEECCHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHH
AQLLVHVLKRPDYNMGMIGINRAKTADTFPFMDALQALPADHKRIVVRFFNSMLDDGTGE
HHHHHHHHHCCCCCCCEEECCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC
RTKAERLLRDPFFTEPPLPPRDRMHRTYEKLKRLPSF
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKQISGNFTLPSTALRADAERDAPETAQAPEPHTPPHPVADHPLNLLEKRRSITGVLADE
CCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
RKRLEVVVPRLQAALAPHTWSSSSSDSPTTPVTGRSPRLGPQPGSPTWACLLETPARLSA
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHH
LAGADSSDAFQNLRNARRLVSDTRHARQHVVLSPRLVKSLTSRSERPDLIQKLSALKPGA
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHCCCCCHHHHHHHHHCCCCC
LDVDNGFLHVTLETGHAGTAGTLDAMPTVGTGASASTYAVRLAEDLWQGGQNCGRDFIFK
EECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHCCHHHHHH
ALLRTDPQRPIPPTLCDPATAADAPALQQRVAERKAMIFQEYQMIRSVDAVPYIVRAHGV
HHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEECCCE
VQIEHTFGILLEKIDGISVRSMIGRARTALQQGAISAMEYLGLARQLMADVLVGIACCED
EEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
AGIVHQDISHNNVMYDQPMKIFRLIDMGLGAEEGDPNRGGTPGFYDLSTPARHARDVYSV
CCCHHHCCCCCCCEECCHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHH
AQLLVHVLKRPDYNMGMIGINRAKTADTFPFMDALQALPADHKRIVVRFFNSMLDDGTGE
HHHHHHHHHCCCCCCCEEECCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC
RTKAERLLRDPFFTEPPLPPRDRMHRTYEKLKRLPSF
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA