Click here to switch to the map view.

The map label for this gene is 78046755

Identifier: 78046755

GI number: 78046755

Start: 1340893

End: 1341669

Strand: Reverse

Name: 78046755

Synonym: XCV1199

Alternate gene names: NA

Gene position: 1341669-1340893 (Counterclockwise)

Preceding gene: 78046759

Following gene: 78046752

Centisome position: 25.91

GC content: 64.35

Gene sequence:

>777_bases
ATGCGCCGCCGCGCTACCGGTGTCATACATGAGCCCGCACACCGCGCACGCTGCAAGGAACATGCGCCATGGCTCGGACC
AGCGCGGCTCCAACGGATGCATAACCCTGTCTCGGTATACTGCAGGCCCCCGACACACCGCTCGCCCATGTCCAACGTCC
TTCAGCTGCGCACCGCAAAACAGCGCGAAGAGCTCCTGGTAGACGACGTACTGGACGCCGCCGAACGCTGCATCGACGAG
ATCGGCCTTTCGGCCACCAGCTTCGAGCTCATCGCCGAACGCACCCGTCTGTCATGCGGCAGTCTGCTGCAGCGCTTCGA
AGACAAGGACGCGCTGGTGCGCGCATTGCTCGAACGCAACTACATGCGCGCCATCCGTCAGATGTGGCTGGTGGAACGCC
CGGCCAACGTGCACGTGGTGGACTTCATCGCCGGCCTGCTCGAAGACTGGCTGCTGCAGGAAATCAACATCAAGCGCACC
CGCATCGACCTGGAGCTGCACCTGGCTACCCTGCGCGACCCGGTGCTGGCCGCCTTCATGCGCCGGCAGAGCGCATCGCT
GATCGAACACCTCAGCGCATTGCTCAAGCGCCTGCTCCGCGGCCATACCGACACCGCCAGCAGCGAACACGAATTCCAGG
CCCGCGTCTTCGCCGTCGCTGCCATGTGCGGCGGCCTGCACAGCGTGATGACCAGCGGCATGGAACTCAACCGCATGCAT
CTGCAGCTGATCCTGCGGGAGAGTTTGTCGGGCATCCTCAAGTCGGCGCCGGTGTAA

Upstream 100 bases:

>100_bases
CCCGCAACCGCACTGTGCTCACTCACACCCATCTCCTGCATCACGTCGGCACCACGTGTCGCACAGCCGCCGTGAACAGG
TGGTCGACCATGCGCGCGGC

Downstream 100 bases:

>100_bases
TCCTCGAGCAGCACCGGCTCGCCGATTGCGGGCCGCATGCTCCCGCCATTTGCCAGCGCTCACTCAGTCTGCCGACGACG
TCGACGCTTCATCCGCTGCA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MRRRATGVIHEPAHRARCKEHAPWLGPARLQRMHNPVSVYCRPPTHRSPMSNVLQLRTAKQREELLVDDVLDAAERCIDE
IGLSATSFELIAERTRLSCGSLLQRFEDKDALVRALLERNYMRAIRQMWLVERPANVHVVDFIAGLLEDWLLQEINIKRT
RIDLELHLATLRDPVLAAFMRRQSASLIEHLSALLKRLLRGHTDTASSEHEFQARVFAVAAMCGGLHSVMTSGMELNRMH
LQLILRESLSGILKSAPV

Sequences:

>Translated_258_residues
MRRRATGVIHEPAHRARCKEHAPWLGPARLQRMHNPVSVYCRPPTHRSPMSNVLQLRTAKQREELLVDDVLDAAERCIDE
IGLSATSFELIAERTRLSCGSLLQRFEDKDALVRALLERNYMRAIRQMWLVERPANVHVVDFIAGLLEDWLLQEINIKRT
RIDLELHLATLRDPVLAAFMRRQSASLIEHLSALLKRLLRGHTDTASSEHEFQARVFAVAAMCGGLHSVMTSGMELNRMH
LQLILRESLSGILKSAPV
>Mature_258_residues
MRRRATGVIHEPAHRARCKEHAPWLGPARLQRMHNPVSVYCRPPTHRSPMSNVLQLRTAKQREELLVDDVLDAAERCIDE
IGLSATSFELIAERTRLSCGSLLQRFEDKDALVRALLERNYMRAIRQMWLVERPANVHVVDFIAGLLEDWLLQEINIKRT
RIDLELHLATLRDPVLAAFMRRQSASLIEHLSALLKRLLRGHTDTASSEHEFQARVFAVAAMCGGLHSVMTSGMELNRMH
LQLILRESLSGILKSAPV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29397; Mature: 29397

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRRATGVIHEPAHRARCKEHAPWLGPARLQRMHNPVSVYCRPPTHRSPMSNVLQLRTAK
CCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHH
QREELLVDDVLDAAERCIDEIGLSATSFELIAERTRLSCGSLLQRFEDKDALVRALLERN
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
YMRAIRQMWLVERPANVHVVDFIAGLLEDWLLQEINIKRTRIDLELHLATLRDPVLAAFM
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHEEHHHHHHHHHHHHHHHHHH
RRQSASLIEHLSALLKRLLRGHTDTASSEHEFQARVFAVAAMCGGLHSVMTSGMELNRMH
HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
LQLILRESLSGILKSAPV
HHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRRRATGVIHEPAHRARCKEHAPWLGPARLQRMHNPVSVYCRPPTHRSPMSNVLQLRTAK
CCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHH
QREELLVDDVLDAAERCIDEIGLSATSFELIAERTRLSCGSLLQRFEDKDALVRALLERN
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
YMRAIRQMWLVERPANVHVVDFIAGLLEDWLLQEINIKRTRIDLELHLATLRDPVLAAFM
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHEEHHHHHHHHHHHHHHHHHH
RRQSASLIEHLSALLKRLLRGHTDTASSEHEFQARVFAVAAMCGGLHSVMTSGMELNRMH
HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
LQLILRESLSGILKSAPV
HHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA