| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is kbl [C]
Identifier: 78046602
GI number: 78046602
Start: 1171904
End: 1173112
Strand: Reverse
Name: kbl [C]
Synonym: XCV1046
Alternate gene names: 78046602
Gene position: 1173112-1171904 (Counterclockwise)
Preceding gene: 78046608
Following gene: 78046601
Centisome position: 22.65
GC content: 64.1
Gene sequence:
>1209_bases ATGACCACCGCTCCCGCCGCGCTGACTGCCCATTACGCCGCCGAACTGGATGCCATCCAGGCCCAAGGCCTGTTCAAGTC CGAGCGCATCATCACCGGTCCGCAGTCGGCCGAGATCACCCTGGCCGATGGCCGCCGCGTGCTGAACTTCTGTGCCAACA ACTATCTGGGCCTGGCCGACCACCCGGACATCATCCAGGCCGCCAAGGACGCGCTGGACAGCCACGGCTTCGGCATGGCC TCGGTACGCTTCATCTGCGGCACCCAGGACCTGCACAAGCAACTGGAACGCAGCATCGCCGAGTTCTTCGGCACCGAAGA CACCATCCTCTACGCGGCCTGTTTCGATGCCAATGGCGGCCTGTTCGAACCGCTGCTGGGCGAGCACGACGCCATCATTT CCGACGCGCTCAACCATGCCTCCATCATCGATGGTGTGCGCCTGTGCAAGGCCAAGCGCTTCCGCTACGCCAACTGCGAC ATGGCCGATCTGGAGGCGCAGCTGCAGGCCGCCGACGCCGCCGGTTGCAAGACCAAGCTGATCACCAGCGACGGCGTGTT CTCGATGGACGGCTTCATCGCCCCGCTCGACGAAATCACTGCCCTGGCCCGCAAGTACAACGCGCTGGTGCATATCGACG AATGCCACGCCACCGGCTTCCTCGGCGCCACCGGCCGCGGCTCGGCCGAAGTCAAGGGCGTACTGGACCAGATCGATATT TTCACCGGCACCCTGGGCAAGGCCATGGGCGGCGCACTCGGCGGCTTCACCACCGCAAAGCGCGAAGTGATCGAGTTGCT GCGCCAGCGTTCGCGCCCCTACCTGTTCTCCAATTCATTGCCGCCGCACGTGGTGGCTGCCGGCATCAAGGCCTTCGACA TGCTGGATGCCGCGGGCGAGCTGCGCACGCAGCTGGTCGAAAACACCACCTATTTCCGCGCCCGCATGACCGCCGCCGGT TTCGACGTCAAGCCGGGCGTGCATCCGATCAGCCCGGTGATGCTGTACGACGCACCGCTGGCGCAAAAATTCGCCGAGCG CTTGCTGGAAGAAGGCATCTACGCCATCGGCTTTTTCTTTCCGGTGGTTCCGAAAGGCCAGGCGCGCATTCGCACCCAGA TCAGCGCAGCGCATACGCGCGAGCACCTGGATCATGCGATCGAAGCGTTCATCAAGATCGGGCGCGAACTCAAGGTCATC GACGCCTGA
Upstream 100 bases:
>100_bases GAAATGACATCAGCGCCGCCTCTTATGCCGATTTTGCATGACGTAGTGGTATGCCACCGTGATCGTTAAAATTGCGCTTC TTTCTGCCACTGCGACCGCC
Downstream 100 bases:
>100_bases GCATGCGCACGGTGCTGCGCCAACGGCTGCTGCTGGCGGCGCAGACCGATGCGCAGGCGCAGCTGCGCGACGGCCATTGG GAGACACGCTGCCTGCATTG
Product: 2-amino-3-ketobutyrate coenzyme A ligase
Products: NA
Alternate protein names: AONS/AKB ligase; 7-keto-8-amino-pelargonic acid synthase; 7-KAP synthase; KAPA synthase; 8-amino-7-ketopelargonate synthase; Alpha-oxoamine synthase; L-alanine--pimeloyl-CoA ligase [H]
Number of amino acids: Translated: 402; Mature: 401
Protein sequence:
>402_residues MTTAPAALTAHYAAELDAIQAQGLFKSERIITGPQSAEITLADGRRVLNFCANNYLGLADHPDIIQAAKDALDSHGFGMA SVRFICGTQDLHKQLERSIAEFFGTEDTILYAACFDANGGLFEPLLGEHDAIISDALNHASIIDGVRLCKAKRFRYANCD MADLEAQLQAADAAGCKTKLITSDGVFSMDGFIAPLDEITALARKYNALVHIDECHATGFLGATGRGSAEVKGVLDQIDI FTGTLGKAMGGALGGFTTAKREVIELLRQRSRPYLFSNSLPPHVVAAGIKAFDMLDAAGELRTQLVENTTYFRARMTAAG FDVKPGVHPISPVMLYDAPLAQKFAERLLEEGIYAIGFFFPVVPKGQARIRTQISAAHTREHLDHAIEAFIKIGRELKVI DA
Sequences:
>Translated_402_residues MTTAPAALTAHYAAELDAIQAQGLFKSERIITGPQSAEITLADGRRVLNFCANNYLGLADHPDIIQAAKDALDSHGFGMA SVRFICGTQDLHKQLERSIAEFFGTEDTILYAACFDANGGLFEPLLGEHDAIISDALNHASIIDGVRLCKAKRFRYANCD MADLEAQLQAADAAGCKTKLITSDGVFSMDGFIAPLDEITALARKYNALVHIDECHATGFLGATGRGSAEVKGVLDQIDI FTGTLGKAMGGALGGFTTAKREVIELLRQRSRPYLFSNSLPPHVVAAGIKAFDMLDAAGELRTQLVENTTYFRARMTAAG FDVKPGVHPISPVMLYDAPLAQKFAERLLEEGIYAIGFFFPVVPKGQARIRTQISAAHTREHLDHAIEAFIKIGRELKVI DA >Mature_401_residues TTAPAALTAHYAAELDAIQAQGLFKSERIITGPQSAEITLADGRRVLNFCANNYLGLADHPDIIQAAKDALDSHGFGMAS VRFICGTQDLHKQLERSIAEFFGTEDTILYAACFDANGGLFEPLLGEHDAIISDALNHASIIDGVRLCKAKRFRYANCDM ADLEAQLQAADAAGCKTKLITSDGVFSMDGFIAPLDEITALARKYNALVHIDECHATGFLGATGRGSAEVKGVLDQIDIF TGTLGKAMGGALGGFTTAKREVIELLRQRSRPYLFSNSLPPHVVAAGIKAFDMLDAAGELRTQLVENTTYFRARMTAAGF DVKPGVHPISPVMLYDAPLAQKFAERLLEEGIYAIGFFFPVVPKGQARIRTQISAAHTREHLDHAIEAFIKIGRELKVID A
Specific function: Catalyzes the decarboxylative condensation of pimeloyl- CoA and L-alanine to produce 8-amino-7-oxononanoate (AON), coenzyme A and/or converts 2-amino-3-ketobutyrate to glycine and acetyl-CoA [H]
COG id: COG0156
COG function: function code H; 7-keto-8-aminopelargonate synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI7657118, Length=395, Percent_Identity=55.6962025316456, Blast_Score=445, Evalue=1e-125, Organism=Homo sapiens, GI284448556, Length=421, Percent_Identity=52.2565320665083, Blast_Score=435, Evalue=1e-122, Organism=Homo sapiens, GI83977442, Length=347, Percent_Identity=32.5648414985591, Blast_Score=204, Evalue=1e-52, Organism=Homo sapiens, GI83977440, Length=347, Percent_Identity=32.5648414985591, Blast_Score=204, Evalue=1e-52, Organism=Homo sapiens, GI83977444, Length=347, Percent_Identity=32.5648414985591, Blast_Score=204, Evalue=1e-52, Organism=Homo sapiens, GI4758668, Length=369, Percent_Identity=35.5013550135501, Blast_Score=196, Evalue=3e-50, Organism=Homo sapiens, GI119220554, Length=370, Percent_Identity=34.5945945945946, Blast_Score=195, Evalue=7e-50, Organism=Homo sapiens, GI4502025, Length=368, Percent_Identity=31.7934782608696, Blast_Score=192, Evalue=4e-49, Organism=Homo sapiens, GI40316939, Length=368, Percent_Identity=31.7934782608696, Blast_Score=192, Evalue=4e-49, Organism=Homo sapiens, GI5454084, Length=262, Percent_Identity=31.2977099236641, Blast_Score=125, Evalue=1e-28, Organism=Escherichia coli, GI1790046, Length=386, Percent_Identity=65.0259067357513, Blast_Score=518, Evalue=1e-148, Organism=Escherichia coli, GI1786993, Length=352, Percent_Identity=31.25, Blast_Score=175, Evalue=4e-45, Organism=Caenorhabditis elegans, GI71994529, Length=403, Percent_Identity=57.0719602977667, Blast_Score=466, Evalue=1e-132, Organism=Caenorhabditis elegans, GI32566772, Length=367, Percent_Identity=32.1525885558583, Blast_Score=181, Evalue=5e-46, Organism=Caenorhabditis elegans, GI17560914, Length=366, Percent_Identity=31.6939890710383, Blast_Score=164, Evalue=7e-41, Organism=Caenorhabditis elegans, GI17560912, Length=366, Percent_Identity=31.6939890710383, Blast_Score=164, Evalue=8e-41, Organism=Caenorhabditis elegans, GI71982617, Length=273, Percent_Identity=26.7399267399267, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI71982625, Length=273, Percent_Identity=26.7399267399267, Blast_Score=100, Evalue=1e-21, Organism=Saccharomyces cerevisiae, GI6320438, Length=421, Percent_Identity=31.353919239905, Blast_Score=188, Evalue=1e-48, Organism=Saccharomyces cerevisiae, GI6320267, Length=369, Percent_Identity=31.4363143631436, Blast_Score=172, Evalue=8e-44, Organism=Saccharomyces cerevisiae, GI6323954, Length=267, Percent_Identity=29.5880149812734, Blast_Score=119, Evalue=7e-28, Organism=Drosophila melanogaster, GI24662918, Length=398, Percent_Identity=59.5477386934673, Blast_Score=486, Evalue=1e-137, Organism=Drosophila melanogaster, GI17137420, Length=365, Percent_Identity=31.2328767123288, Blast_Score=189, Evalue=2e-48, Organism=Drosophila melanogaster, GI17136286, Length=372, Percent_Identity=33.6021505376344, Blast_Score=175, Evalue=5e-44, Organism=Drosophila melanogaster, GI24653280, Length=322, Percent_Identity=28.8819875776398, Blast_Score=117, Evalue=2e-26, Organism=Drosophila melanogaster, GI24653276, Length=322, Percent_Identity=28.8819875776398, Blast_Score=117, Evalue=2e-26, Organism=Drosophila melanogaster, GI24653278, Length=322, Percent_Identity=28.8819875776398, Blast_Score=117, Evalue=2e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011282 - InterPro: IPR001917 - InterPro: IPR004839 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.3.1.29; =2.3.1.47 [H]
Molecular weight: Translated: 43428; Mature: 43297
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTAPAALTAHYAAELDAIQAQGLFKSERIITGPQSAEITLADGRRVLNFCANNYLGLAD CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCEEEECCCHHHHHHHHCCCCCCCC HPDIIQAAKDALDSHGFGMASVRFICGTQDLHKQLERSIAEFFGTEDTILYAACFDANGG CCHHHHHHHHHHHCCCCCHHHEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCC LFEPLLGEHDAIISDALNHASIIDGVRLCKAKRFRYANCDMADLEAQLQAADAAGCKTKL CCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEE ITSDGVFSMDGFIAPLDEITALARKYNALVHIDECHATGFLGATGRGSAEVKGVLDQIDI EECCCCEECCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHH FTGTLGKAMGGALGGFTTAKREVIELLRQRSRPYLFSNSLPPHVVAAGIKAFDMLDAAGE HHHHHHHHHCCHHCCHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHH LRTQLVENTTYFRARMTAAGFDVKPGVHPISPVMLYDAPLAQKFAERLLEEGIYAIGFFF HHHHHHHCCHHHHEEHEECCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCHHEEHHHH PVVPKGQARIRTQISAAHTREHLDHAIEAFIKIGRELKVIDA HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECC >Mature Secondary Structure TTAPAALTAHYAAELDAIQAQGLFKSERIITGPQSAEITLADGRRVLNFCANNYLGLAD CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCEEEECCCHHHHHHHHCCCCCCCC HPDIIQAAKDALDSHGFGMASVRFICGTQDLHKQLERSIAEFFGTEDTILYAACFDANGG CCHHHHHHHHHHHCCCCCHHHEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCC LFEPLLGEHDAIISDALNHASIIDGVRLCKAKRFRYANCDMADLEAQLQAADAAGCKTKL CCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEE ITSDGVFSMDGFIAPLDEITALARKYNALVHIDECHATGFLGATGRGSAEVKGVLDQIDI EECCCCEECCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHH FTGTLGKAMGGALGGFTTAKREVIELLRQRSRPYLFSNSLPPHVVAAGIKAFDMLDAAGE HHHHHHHHHCCHHCCHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHH LRTQLVENTTYFRARMTAAGFDVKPGVHPISPVMLYDAPLAQKFAERLLEEGIYAIGFFF HHHHHHHCCHHHHEEHEECCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCHHEEHHHH PVVPKGQARIRTQISAAHTREHLDHAIEAFIKIGRELKVIDA HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]