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The map label for this gene is 78046530

Identifier: 78046530

GI number: 78046530

Start: 1103310

End: 1105016

Strand: Reverse

Name: 78046530

Synonym: XCV0974

Alternate gene names: NA

Gene position: 1105016-1103310 (Counterclockwise)

Preceding gene: 78046531

Following gene: 78046529

Centisome position: 21.34

GC content: 67.02

Gene sequence:

>1707_bases
GTGAGTGCGCAAGTCCCGCGCGAGCTGCTGCAGCTGCGCGAGCAAGTGCGACGCCAGCCCGGCGATTTCGTCGCCTGGTT
GATGCTGGCCGATGCCGAGCTGGGCATGGGCGTCACCGCTGCCGGCGAAGCGGCCGTGCAGCGCGCGCTGGCGCTGCATC
CGGGTCATCCGGAAGCGGTGGCGCGGCTGGGACGGGTGCGCTGGGCGCAGCAGCGCCATGCAGAAGCGGCCACGCTGCTC
CAACAGGCCTCGGACCTGGTACCGCAGCATCCGGGGATCGCCCTGTGGCTTGGGCACGCGCTCGAAGATGCAGGCCAACC
GGAACAGGCCGCGGCCGCCTATACGCGCGCCCACAAGCTGCTGTCCGGCGAGCCCTACATCACCGCACAACTGCTCAACT
GGCGACGCCGCTTATGCGATTGGCGCGAGCTGGACTCACTGGCTGCACAGGTGCGCGCCGCAGTCACACAAGGCGAGGCG
GCCGTGGAGCCTTTCGCGTTCCTGAGCGAGGACGCCAGCGCCGCGGAGCAACTGGCGTGCGCCCGTACCCGCGCGCAGGC
CATTGCCTCCTCGGTGCGCCCGCTGCCAGCGTCCACGCTGCGCAGCCGCGGCGCGCTGCAACTCGGGTTCGTGTCCAACG
GCTTTGGCGCCCACCCGACGGGCTTACTGACGGTGGCCTTGTTCGAAGCGTTGCAGCAACGCCAACCGGATCTGCACATG
CAGCTGTTTGCAACCAGCCCGGACGATGGCAGCGACATTCGCGCGCGCCTGGCGCAGGCAACGCGCATGCACGAGATCAC
TGCGCTGGGGCATCTGGCAACCGCGCAACATATCCGCGACCAGGGCATCGATCTGTTGTTCGATCTGCGCGGCTGGGGCG
GTGGCGGACGGCCGGAAGTCTTCGCATTGCGGCCGGCGCCGGTGCAGCTCAACTGGCTGGCGTATCCGGGCACCTCGGGC
GCGCCGTGGATGGATTATGTGCTTGGCGATACCGTTGCATTGCCGACGTCGCTTGAGCCGTTCTATAGCGAGCAGGTGCT
GCGCTTGCCGCGCGCCTTCCAGCCATCGGACACCTCGCGCACGGTAGCCGAACCGCCATCGCGTGCTCAGTGCGGGCTGC
CTGAGCACGCTGTGGTGCTGTGCTGCTTCAACAACAGTTACAAGCTCAATCCACGCAGCATGGCGCGCATGCTGGCGGTG
TTGCGCGCGGTGCCTGGCAGCGTGCTGTGGCTGCTGTCCGGCCCGGGTGAGGCGGATGCGCGATTGCGTGCAGCAGCGCA
GGCACTGGGCGTGCACGCGCAGCGTTTGGTCTTCATGCCCAAACTGCCGCACCCGCAGTATCTGGCGCGCTATCGACATG
CGGATCTGTTTCTGGATACGCACCCCTACAACGCGCACACCACCGCCTCCGATGCGTTATGGGCAGGTTGCCCGGTCTTG
ACCACACCTGGCCAGACGTTTGCCGCGCGTGTGGCCGGCAGCCTGAATCATCATCTGGGGCTGGATGAAATGAATGTGGC
CGATGACGCTGCGTTCGTGGCCACGGCGGTGGCGTTGGCGAGCGATCCAGCGGCACTGGGTGCGTTGCGTGCTCGGGTGG
CGGAGCGTCGGCGCGAATCGGACCTGTTCAATATGGACGGGTTTGCGGATGCGTTTGGAGAATTGGTGCGTGGGGTCGCG
GGAAAGCATGGCTGGTTAGGGGTTTAA

Upstream 100 bases:

>100_bases
ACGACCTGCCCAACATCATCGAAGGCGATCTGGATGCGTTGATCGGGCGGCTGCTGCACGAACATCAAGCCGACGAACTG
GCACGGTTGAGCGATAGCCC

Downstream 100 bases:

>100_bases
CAACGGCCGCTACGTGATGGATCGCTGTCTGCCGCCGCACCCTGCCCCCAACCTCCGCGCCCCGCCGTGGCCGGCGCTTG
CAGCGCGGGCGCTCCGGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: O-Linked N-Acetylglucosamine Transferase; TPR Domain-Containing Protein; Tetratricopeptide TPR_2 Repeat Protein; SPINDLY Family O-Linked N-Acetylglucosamine Transferase; Tetratricopeptide TPR_1 Repeat-Containing Protein; Methyltransferase Type; TPR Repeat Protein; TPR Domain Protein; FkbM Family Methyltransferase; Tetratricopeptide Repeat-Containing Protein; SPY Protein; Glycosyltransferase TPR Domain Protein; Glycosyl Transferase Family Protein; Tpr Repeat-Containing Protein; Porphyrin Biosynthesis Protein; Transferase; Tetratricopeptide Repeat Family Protein; Sulfotransferase; TPR Domain/SEC-C Motif Domain Protein; TPR Repeat; O-Linked N-Acetylglucosamine TransferaNDLY Family; Tetratricopeptide Repeat Protein; O-Linked Acetylglucosamine Transferase; Glycosyltransferase TPR Domain-Containing Protein; Methyltransferase Regulatory Domain; Tetratricopeptide Domain Protein; TPR Repeat Domain-Containing Protein; TPR Repeat-Containing Glycosyl Transferase; O-Linked GLCNAC Transferase; Glycosyl Transferase TPR Repeat Protein; Tetratricopeptide Repeat Domain Protein

Number of amino acids: Translated: 568; Mature: 567

Protein sequence:

>568_residues
MSAQVPRELLQLREQVRRQPGDFVAWLMLADAELGMGVTAAGEAAVQRALALHPGHPEAVARLGRVRWAQQRHAEAATLL
QQASDLVPQHPGIALWLGHALEDAGQPEQAAAAYTRAHKLLSGEPYITAQLLNWRRRLCDWRELDSLAAQVRAAVTQGEA
AVEPFAFLSEDASAAEQLACARTRAQAIASSVRPLPASTLRSRGALQLGFVSNGFGAHPTGLLTVALFEALQQRQPDLHM
QLFATSPDDGSDIRARLAQATRMHEITALGHLATAQHIRDQGIDLLFDLRGWGGGGRPEVFALRPAPVQLNWLAYPGTSG
APWMDYVLGDTVALPTSLEPFYSEQVLRLPRAFQPSDTSRTVAEPPSRAQCGLPEHAVVLCCFNNSYKLNPRSMARMLAV
LRAVPGSVLWLLSGPGEADARLRAAAQALGVHAQRLVFMPKLPHPQYLARYRHADLFLDTHPYNAHTTASDALWAGCPVL
TTPGQTFAARVAGSLNHHLGLDEMNVADDAAFVATAVALASDPAALGALRARVAERRRESDLFNMDGFADAFGELVRGVA
GKHGWLGV

Sequences:

>Translated_568_residues
MSAQVPRELLQLREQVRRQPGDFVAWLMLADAELGMGVTAAGEAAVQRALALHPGHPEAVARLGRVRWAQQRHAEAATLL
QQASDLVPQHPGIALWLGHALEDAGQPEQAAAAYTRAHKLLSGEPYITAQLLNWRRRLCDWRELDSLAAQVRAAVTQGEA
AVEPFAFLSEDASAAEQLACARTRAQAIASSVRPLPASTLRSRGALQLGFVSNGFGAHPTGLLTVALFEALQQRQPDLHM
QLFATSPDDGSDIRARLAQATRMHEITALGHLATAQHIRDQGIDLLFDLRGWGGGGRPEVFALRPAPVQLNWLAYPGTSG
APWMDYVLGDTVALPTSLEPFYSEQVLRLPRAFQPSDTSRTVAEPPSRAQCGLPEHAVVLCCFNNSYKLNPRSMARMLAV
LRAVPGSVLWLLSGPGEADARLRAAAQALGVHAQRLVFMPKLPHPQYLARYRHADLFLDTHPYNAHTTASDALWAGCPVL
TTPGQTFAARVAGSLNHHLGLDEMNVADDAAFVATAVALASDPAALGALRARVAERRRESDLFNMDGFADAFGELVRGVA
GKHGWLGV
>Mature_567_residues
SAQVPRELLQLREQVRRQPGDFVAWLMLADAELGMGVTAAGEAAVQRALALHPGHPEAVARLGRVRWAQQRHAEAATLLQ
QASDLVPQHPGIALWLGHALEDAGQPEQAAAAYTRAHKLLSGEPYITAQLLNWRRRLCDWRELDSLAAQVRAAVTQGEAA
VEPFAFLSEDASAAEQLACARTRAQAIASSVRPLPASTLRSRGALQLGFVSNGFGAHPTGLLTVALFEALQQRQPDLHMQ
LFATSPDDGSDIRARLAQATRMHEITALGHLATAQHIRDQGIDLLFDLRGWGGGGRPEVFALRPAPVQLNWLAYPGTSGA
PWMDYVLGDTVALPTSLEPFYSEQVLRLPRAFQPSDTSRTVAEPPSRAQCGLPEHAVVLCCFNNSYKLNPRSMARMLAVL
RAVPGSVLWLLSGPGEADARLRAAAQALGVHAQRLVFMPKLPHPQYLARYRHADLFLDTHPYNAHTTASDALWAGCPVLT
TPGQTFAARVAGSLNHHLGLDEMNVADDAAFVATAVALASDPAALGALRARVAERRRESDLFNMDGFADAFGELVRGVAG
KHGWLGV

Specific function: Unknown

COG id: COG3914

COG function: function code O; Predicted O-linked N-acetylglucosamine transferase, SPINDLY family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI32307148, Length=182, Percent_Identity=39.010989010989, Blast_Score=135, Evalue=8e-32,
Organism=Homo sapiens, GI32307150, Length=182, Percent_Identity=39.010989010989, Blast_Score=135, Evalue=1e-31,
Organism=Caenorhabditis elegans, GI115532690, Length=190, Percent_Identity=35.2631578947368, Blast_Score=122, Evalue=4e-28,
Organism=Caenorhabditis elegans, GI115532692, Length=190, Percent_Identity=35.2631578947368, Blast_Score=122, Evalue=4e-28,
Organism=Drosophila melanogaster, GI17647755, Length=328, Percent_Identity=28.3536585365854, Blast_Score=128, Evalue=1e-29,
Organism=Drosophila melanogaster, GI24585827, Length=328, Percent_Identity=28.3536585365854, Blast_Score=128, Evalue=1e-29,
Organism=Drosophila melanogaster, GI24585829, Length=328, Percent_Identity=28.3536585365854, Blast_Score=128, Evalue=1e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61325; Mature: 61194

Theoretical pI: Translated: 7.20; Mature: 7.20

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAQVPRELLQLREQVRRQPGDFVAWLMLADAELGMGVTAAGEAAVQRALALHPGHPEAV
CCCCCHHHHHHHHHHHHHCCCHHEEHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHH
ARLGRVRWAQQRHAEAATLLQQASDLVPQHPGIALWLGHALEDAGQPEQAAAAYTRAHKL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHCCCCCHHHHHHHHHHHHH
LSGEPYITAQLLNWRRRLCDWRELDSLAAQVRAAVTQGEAAVEPFAFLSEDASAAEQLAC
HCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHCHHHHHHCCHHHHHHHHH
ARTRAQAIASSVRPLPASTLRSRGALQLGFVSNGFGAHPTGLLTVALFEALQQRQPDLHM
HHHHHHHHHHHCCCCCHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEE
QLFATSPDDGSDIRARLAQATRMHEITALGHLATAQHIRDQGIDLLFDLRGWGGGGRPEV
EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCE
FALRPAPVQLNWLAYPGTSGAPWMDYVLGDTVALPTSLEPFYSEQVLRLPRAFQPSDTSR
EEECCCCEEEEEEECCCCCCCCHHHHHHCCCEECCCCCCHHHHHHHHHCCCCCCCCCCCC
TVAEPPSRAQCGLPEHAVVLCCFNNSYKLNPRSMARMLAVLRAVPGSVLWLLSGPGEADA
CCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHH
RLRAAAQALGVHAQRLVFMPKLPHPQYLARYRHADLFLDTHPYNAHTTASDALWAGCPVL
HHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHCCEEEECCCCCCCCCCCCHHHCCCCEE
TTPGQTFAARVAGSLNHHLGLDEMNVADDAAFVATAVALASDPAALGALRARVAERRRES
ECCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC
DLFNMDGFADAFGELVRGVAGKHGWLGV
CCCCCCHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SAQVPRELLQLREQVRRQPGDFVAWLMLADAELGMGVTAAGEAAVQRALALHPGHPEAV
CCCCHHHHHHHHHHHHHCCCHHEEHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHH
ARLGRVRWAQQRHAEAATLLQQASDLVPQHPGIALWLGHALEDAGQPEQAAAAYTRAHKL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHCCCCCHHHHHHHHHHHHH
LSGEPYITAQLLNWRRRLCDWRELDSLAAQVRAAVTQGEAAVEPFAFLSEDASAAEQLAC
HCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHCHHHHHHCCHHHHHHHHH
ARTRAQAIASSVRPLPASTLRSRGALQLGFVSNGFGAHPTGLLTVALFEALQQRQPDLHM
HHHHHHHHHHHCCCCCHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEE
QLFATSPDDGSDIRARLAQATRMHEITALGHLATAQHIRDQGIDLLFDLRGWGGGGRPEV
EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCE
FALRPAPVQLNWLAYPGTSGAPWMDYVLGDTVALPTSLEPFYSEQVLRLPRAFQPSDTSR
EEECCCCEEEEEEECCCCCCCCHHHHHHCCCEECCCCCCHHHHHHHHHCCCCCCCCCCCC
TVAEPPSRAQCGLPEHAVVLCCFNNSYKLNPRSMARMLAVLRAVPGSVLWLLSGPGEADA
CCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHH
RLRAAAQALGVHAQRLVFMPKLPHPQYLARYRHADLFLDTHPYNAHTTASDALWAGCPVL
HHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHCCEEEECCCCCCCCCCCCHHHCCCCEE
TTPGQTFAARVAGSLNHHLGLDEMNVADDAAFVATAVALASDPAALGALRARVAERRRES
ECCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC
DLFNMDGFADAFGELVRGVAGKHGWLGV
CCCCCCHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA