| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is sahH [H]
Identifier: 78046412
GI number: 78046412
Start: 975437
End: 976879
Strand: Reverse
Name: sahH [H]
Synonym: XCV0856
Alternate gene names: 78046412
Gene position: 976879-975437 (Counterclockwise)
Preceding gene: 78046421
Following gene: 78046406
Centisome position: 18.86
GC content: 63.48
Gene sequence:
>1443_bases ATGAACGCTGTCACAAAGATCACCCCGCACACCGACTACAAGATTGCCGACATCTCCCTGGCCGATTGGGGCCGCAAGGA GCTGGACATCGCCGAGCACGAAATGCCGGGCCTGATGTCGATCCGCCGCAAGCATGCGCAGACCAAGCCGCTGAAGGACG TCCGCATCACCGGCTCGCTGCACATGACCATCCAGACCGCCGTGCTGATCGAAACGCTCAAGGACATCGGCGCCGATGTG CGCTGGGCCTCGTGCAACATCTTCTCCACCCAGGACCACGCCGCCGCTGCGATCGCCGCGACCGGCACCCCCGTGTTCGC CTGGAAGGGCGAGACGCTGGAAGAGTACTGGGACTGCACCCTGGACGCGCTGACCTTCACCCTGCCCGACGGCACCCTCA CCGGCCCGGAGCTGGTGGTGGACGACGGTGGCGACGTCACCCTGCTGATCCACAAGGGCTATGAGCTCGAGAACGGCAGC ACCTGGGTGGACGAGCCGGCCTCCTCGCACGAAGAGGGCGTCATCAAGGCGTTGCTCAAGCGCGTGGCCGTCGAGCGCCC GGGCTACTGGGGCCGCGTGGTCAAGGACTGGAAGGGCGTCTCCGAAGAAACCACCACCGGCGTGCACCGCCTGTACCAGA TCGCCGAAGCCGGCAAGCTGCTGATCCCGGCCATCAACGTCAACGACTCGGTCACCAAGAGCAAGTTCGACAACCTGTAC GGCTGCCGCGAGTCGCTGGCCGATGGCCTCAAGCGCGCGATGGACGTGATGCTTGCCGGCAAGGTTGCCGTGGTCTGCGG CTACGGCGATGTCGGCAAGGGCAGCGCCGCCTCGCTGCGCGCCTATGGCGCCCGCGTGATCGTCACCGAAATCGACCCGA TCTGCGCATTGCAGGCGTCGATGGAAGGCTTCGAAGTCAACACCATCGAATCCACCCTGGGCCGGGCCGACATCTATGTC ACCACCACCGGCAACAAGGACATCATCACCGTCGAGCACCTGCAGGCGATGAAGGACCAGGCCATCGTCTGCAACATCGG CCACTTCGACAACGAGATCCAGGTCGATGCGCTCAAGGCGCTGAAGGACGTGCAGAAGATCAACATCAAGCCGCAGGTGG ACAAGTACGTGTTCCCCAACGGCAACGCGATCTTCCTGCTGGCCGATGGCCGCCTGGTGAACCTGGGCTGCGCCACCGGC CACCCGAGCTTCGTGATGTCCAACTCGTTCGCCAACCAGACCCTGGCTCAGATCGACCTGTGGGAAAAGCGCGACACCTA CGAAAAGAAGGTCTACATCCTGCCCAAGCACCTGGATGAAGAAGTTGCGCGTCTGCACCTGGAAAAGATCGGCGTGAAGC TGACCACCCTCACCAAGGACCAGGCCGATTACCTCGGCGTGCCGGTGGAAGGCCCGTTCAAGCCGGATCATTACCGCTAC TGA
Upstream 100 bases:
>100_bases ACTGCACCACAGGTGCAGGTACACGGCCAGGCTCGACCAGCAGTTACCGTTCAACGGCGCCCGGCATTGCAGACATTCGT TTGCCTACCGGAGCCATTGC
Downstream 100 bases:
>100_bases GACGTGGGCGCACGTTCGCCCATCCTCGACAGTGTCAATCAACGGGCGCCGCAAGGCGCCCGTTGTGCTTCAAGGCCATG ATCGGCACGACGTCGAAGCT
Product: S-adenosyl-L-homocysteine hydrolase
Products: NA
Alternate protein names: S-adenosyl-L-homocysteine hydrolase; AdoHcyase [H]
Number of amino acids: Translated: 480; Mature: 480
Protein sequence:
>480_residues MNAVTKITPHTDYKIADISLADWGRKELDIAEHEMPGLMSIRRKHAQTKPLKDVRITGSLHMTIQTAVLIETLKDIGADV RWASCNIFSTQDHAAAAIAATGTPVFAWKGETLEEYWDCTLDALTFTLPDGTLTGPELVVDDGGDVTLLIHKGYELENGS TWVDEPASSHEEGVIKALLKRVAVERPGYWGRVVKDWKGVSEETTTGVHRLYQIAEAGKLLIPAINVNDSVTKSKFDNLY GCRESLADGLKRAMDVMLAGKVAVVCGYGDVGKGSAASLRAYGARVIVTEIDPICALQASMEGFEVNTIESTLGRADIYV TTTGNKDIITVEHLQAMKDQAIVCNIGHFDNEIQVDALKALKDVQKINIKPQVDKYVFPNGNAIFLLADGRLVNLGCATG HPSFVMSNSFANQTLAQIDLWEKRDTYEKKVYILPKHLDEEVARLHLEKIGVKLTTLTKDQADYLGVPVEGPFKPDHYRY
Sequences:
>Translated_480_residues MNAVTKITPHTDYKIADISLADWGRKELDIAEHEMPGLMSIRRKHAQTKPLKDVRITGSLHMTIQTAVLIETLKDIGADV RWASCNIFSTQDHAAAAIAATGTPVFAWKGETLEEYWDCTLDALTFTLPDGTLTGPELVVDDGGDVTLLIHKGYELENGS TWVDEPASSHEEGVIKALLKRVAVERPGYWGRVVKDWKGVSEETTTGVHRLYQIAEAGKLLIPAINVNDSVTKSKFDNLY GCRESLADGLKRAMDVMLAGKVAVVCGYGDVGKGSAASLRAYGARVIVTEIDPICALQASMEGFEVNTIESTLGRADIYV TTTGNKDIITVEHLQAMKDQAIVCNIGHFDNEIQVDALKALKDVQKINIKPQVDKYVFPNGNAIFLLADGRLVNLGCATG HPSFVMSNSFANQTLAQIDLWEKRDTYEKKVYILPKHLDEEVARLHLEKIGVKLTTLTKDQADYLGVPVEGPFKPDHYRY >Mature_480_residues MNAVTKITPHTDYKIADISLADWGRKELDIAEHEMPGLMSIRRKHAQTKPLKDVRITGSLHMTIQTAVLIETLKDIGADV RWASCNIFSTQDHAAAAIAATGTPVFAWKGETLEEYWDCTLDALTFTLPDGTLTGPELVVDDGGDVTLLIHKGYELENGS TWVDEPASSHEEGVIKALLKRVAVERPGYWGRVVKDWKGVSEETTTGVHRLYQIAEAGKLLIPAINVNDSVTKSKFDNLY GCRESLADGLKRAMDVMLAGKVAVVCGYGDVGKGSAASLRAYGARVIVTEIDPICALQASMEGFEVNTIESTLGRADIYV TTTGNKDIITVEHLQAMKDQAIVCNIGHFDNEIQVDALKALKDVQKINIKPQVDKYVFPNGNAIFLLADGRLVNLGCATG HPSFVMSNSFANQTLAQIDLWEKRDTYEKKVYILPKHLDEEVARLHLEKIGVKLTTLTKDQADYLGVPVEGPFKPDHYRY
Specific function: May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine [H]
COG id: COG0499
COG function: function code H; S-adenosylhomocysteine hydrolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosylhomocysteinase family [H]
Homologues:
Organism=Homo sapiens, GI9951915, Length=468, Percent_Identity=59.8290598290598, Blast_Score=535, Evalue=1e-152, Organism=Homo sapiens, GI239937451, Length=446, Percent_Identity=58.9686098654709, Blast_Score=501, Evalue=1e-142, Organism=Homo sapiens, GI298286489, Length=471, Percent_Identity=46.7091295116773, Blast_Score=433, Evalue=1e-121, Organism=Homo sapiens, GI195539337, Length=471, Percent_Identity=46.7091295116773, Blast_Score=433, Evalue=1e-121, Organism=Homo sapiens, GI24308043, Length=471, Percent_Identity=46.7091295116773, Blast_Score=432, Evalue=1e-121, Organism=Homo sapiens, GI195539349, Length=471, Percent_Identity=46.7091295116773, Blast_Score=432, Evalue=1e-121, Organism=Homo sapiens, GI21361647, Length=471, Percent_Identity=46.072186836518, Blast_Score=414, Evalue=1e-115, Organism=Caenorhabditis elegans, GI17506425, Length=471, Percent_Identity=60.0849256900212, Blast_Score=548, Evalue=1e-156, Organism=Saccharomyces cerevisiae, GI6320882, Length=486, Percent_Identity=58.0246913580247, Blast_Score=523, Evalue=1e-149, Organism=Drosophila melanogaster, GI24642172, Length=468, Percent_Identity=62.1794871794872, Blast_Score=557, Evalue=1e-159, Organism=Drosophila melanogaster, GI24656245, Length=459, Percent_Identity=47.7124183006536, Blast_Score=431, Evalue=1e-121, Organism=Drosophila melanogaster, GI45553387, Length=470, Percent_Identity=46.5957446808511, Blast_Score=404, Evalue=1e-112, Organism=Drosophila melanogaster, GI45553385, Length=469, Percent_Identity=46.4818763326226, Blast_Score=401, Evalue=1e-112,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000043 - InterPro: IPR015878 - InterPro: IPR020082 [H]
Pfam domain/function: PF05221 AdoHcyase; PF00670 AdoHcyase_NAD [H]
EC number: =3.3.1.1 [H]
Molecular weight: Translated: 52824; Mature: 52824
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: PS00738 ADOHCYASE_1 ; PS00739 ADOHCYASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAVTKITPHTDYKIADISLADWGRKELDIAEHEMPGLMSIRRKHAQTKPLKDVRITGSL CCCCEECCCCCCEEEEEEECCCCCCCCCCCHHHCCCCHHHHHHHHHCCCCCCEEEEECEE HMTIQTAVLIETLKDIGADVRWASCNIFSTQDHAAAAIAATGTPVFAWKGETLEEYWDCT EEEHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCEEEEEECCCEEEEECCCCHHHHHCCE LDALTFTLPDGTLTGPELVVDDGGDVTLLIHKGYELENGSTWVDEPASSHEEGVIKALLK EEEEEEECCCCCCCCCEEEEECCCCEEEEEECCEEECCCCEECCCCCCCCHHHHHHHHHH RVAVERPGYWGRVVKDWKGVSEETTTGVHRLYQIAEAGKLLIPAINVNDSVTKSKFDNLY HHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHH GCRESLADGLKRAMDVMLAGKVAVVCGYGDVGKGSAASLRAYGARVIVTEIDPICALQAS HHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHCCCEEEEEECCCHHHHHHC MEGFEVNTIESTLGRADIYVTTTGNKDIITVEHLQAMKDQAIVCNIGHFDNEIQVDALKA CCCEEEEHHHHHCCCEEEEEEECCCCCEEEHHHHHHHCCCEEEEEECCCCCCCHHHHHHH LKDVQKINIKPQVDKYVFPNGNAIFLLADGRLVNLGCATGHPSFVMSNSFANQTLAQIDL HHHHHHCCCCCCCCEEECCCCCEEEEEECCEEEEEEECCCCCCEEEECCHHHHHHHHEEC WEKRDTYEKKVYILPKHLDEEVARLHLEKIGVKLTTLTKDQADYLGVPVEGPFKPDHYRY CCCCCCCCCEEEEECCHHHHHHHHHHHHHHCEEEEEEECCCHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MNAVTKITPHTDYKIADISLADWGRKELDIAEHEMPGLMSIRRKHAQTKPLKDVRITGSL CCCCEECCCCCCEEEEEEECCCCCCCCCCCHHHCCCCHHHHHHHHHCCCCCCEEEEECEE HMTIQTAVLIETLKDIGADVRWASCNIFSTQDHAAAAIAATGTPVFAWKGETLEEYWDCT EEEHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCEEEEEECCCEEEEECCCCHHHHHCCE LDALTFTLPDGTLTGPELVVDDGGDVTLLIHKGYELENGSTWVDEPASSHEEGVIKALLK EEEEEEECCCCCCCCCEEEEECCCCEEEEEECCEEECCCCEECCCCCCCCHHHHHHHHHH RVAVERPGYWGRVVKDWKGVSEETTTGVHRLYQIAEAGKLLIPAINVNDSVTKSKFDNLY HHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHH GCRESLADGLKRAMDVMLAGKVAVVCGYGDVGKGSAASLRAYGARVIVTEIDPICALQAS HHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHCCCEEEEEECCCHHHHHHC MEGFEVNTIESTLGRADIYVTTTGNKDIITVEHLQAMKDQAIVCNIGHFDNEIQVDALKA CCCEEEEHHHHHCCCEEEEEEECCCCCEEEHHHHHHHCCCEEEEEECCCCCCCHHHHHHH LKDVQKINIKPQVDKYVFPNGNAIFLLADGRLVNLGCATGHPSFVMSNSFANQTLAQIDL HHHHHHCCCCCCCCEEECCCCCEEEEEECCEEEEEEECCCCCCEEEECCHHHHHHHHEEC WEKRDTYEKKVYILPKHLDEEVARLHLEKIGVKLTTLTKDQADYLGVPVEGPFKPDHYRY CCCCCCCCCEEEEECCHHHHHHHHHHHHHHCEEEEEEECCCHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]