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The map label for this gene is 78045770

Identifier: 78045770

GI number: 78045770

Start: 250522

End: 252924

Strand: Reverse

Name: 78045770

Synonym: XCV0214

Alternate gene names: NA

Gene position: 252924-250522 (Counterclockwise)

Preceding gene: 78045776

Following gene: 78045769

Centisome position: 4.88

GC content: 57.3

Gene sequence:

>2403_bases
ATGCATGAGTTGGAACTTCGAGCCTGCTTTGAACGAGCAGCGTTAACCGGACCGCAGATAGAACACCTCCTGGCCATGAT
TGCGGAGGCACCGAGCCGACGACCAGGCGGCGCGGCACTGAACAATGTCATCGCGCAGTTTTGGTCAGACAAGAACAAGG
CGTCGATCTGGATCGAAAGCCACACGGTTGAACGGTTGTTTGCCTATGAGCTCGAGCTCGACCCCTCTGTCCTGGCCTAC
TACTCACAGATCCCTTGCCGGGGAATTGAGCGTCGCAGCGCGAATGGAAGACGGCACTTAGGGAACGCCACCGCGGACTT
CCTGGTCATTCGTGCCGACTCAGTCACGGTGGTGGAATGCAAGGCGGCACTGCGCATCGAATCACTGCTGCAGCAGAAGC
CACTTGAGTGGGTGCGATCCGATGATGGGGTGATTGAGCGTCCCGCGCTAACCAGCTGGGCATCCGCCTGGGGGCTCAAC
TACGCAGTGTGGGTTCAGCCGTCCCCATTTGCGTGCCTCCTGGCAAATCTCGAGCTCTTGTACTCGATAAAGCCACCTGA
TGAGCCGGGCAAGGCGCATCGGCAAGCCCTACGGCAACTGGAGCGCTCCTCACTGACGATTTGGGAGCTGACACGGCGTG
TCTCAGGACTGACTCCACTGGCGGTTCATCAGCTCCTTCGAATGGGACTGGTATGCGGCACCATCAAAAGCCAACCGATA
GCGCTTACTGAGGCTTTCCGACTCTTTCTTGATCCCCAGCAACGCAGCGCTGCGGAGGCCACTGCAGCTCAACTCGCCGA
CCACCGATTTCGTCAGCATTGTGACCCTGTATCGACATCTTCATACCGAGACCTTTGCGCCGGTCGCCAACGGCTAGAGA
CGCTTAAGGCCATGCGGCTTGGAAACAGCGTCTTCACTCGTCGATATCGAGAACTGGATCGCGTCGTTCGTCAGGCCGAA
GTGGACGGCGTGAGCGAGCTTGAGGCATGCCTGACCAACTACCGACGTTCGGGGAACAGGAGGGCCAGGCTGACCAGGAC
ACAGACGCTTGCTGTAGATCTTGCTGTGCGCAACTGGGATGCCGGAAAGGCCCATAGTAGAGGGCACGCGTACGCTGAAC
ACGTTGCGCATTGCCAGGATGTTAGCTGTGAGCCCGTTTCGAGGACCACTCTCTACAGAAGGTTGTCAGCCGCGAACGCT
TCAAGGAGAGCTCTATTAACCGGCGGCCTGCGTGAGTACCAGAAGAACAGGGAGGCAACCGACCCTCGGTATCGCTCCAT
GGCGTCCCAGATCCTTGGGCTTCGAATTCACATTGACTCTACCCAGATTGACGCCCGAGTCTTCCCCGGGGTTGAAGACA
AGCTCCTACTCGATCGCCCGATCATCTACGTCGCGGTCGACAGCGCTACCAGCTTTCCTGTTTGCTACGAACTAGCTTTT
GGGCCAGCAAGATCAGATGCACTAGCTGCGCTACTTCGGACTTATGTGCGAACAACTGGGTCGCTGCCAAGCATCATTCA
GGTTGATAGGGGGTCTGAGAACAGATCCAGCTGGTTGTCAGCGTTTTGCACGGAGTATCACATTACGCTCTTGATTCACC
CCACGGGGGCGTCAGTCTTCAACAGCGCCGCCGAAAACTGGCTGGGCCGAATCAACTCACGGCTTCATTCTCTGCCGGGG
AGCACGATTCCAGATAAGAAAGGTAGATCTGTCGACGGAAGGTTCAAAAGTCGTCAAACCGCAAGGCTGCAGTTCTCAGC
TCTTCACGAAGTAGTGAACGACGCTATCGAGCTGTTGCGTGACGTCCCTGGTGCAGATGGCGAGTCTCCGATTGAGCGCA
AGGCTCGACTCGTTGATGAAACGGGTATCGCCGGCCACGCCGTGGAAATTGACGATAACTTCCTTTTTCACAGCTCCATA
CCTACCCGCGCCAGTGCCTTGGACCCGAAGCGAGGCATCAAGACGGAGCGCACTCGATATGCGAGTTCTGAGCTGCTTCA
GGCGGCGCGACGCGGAGACGTCATCGAGGTCCGTCGAGACTGCGAAGATCCTACAGTCATGCACGTACAGATGTCTTCTG
GTCGTTGCAAGGCCTGGTCGGGAATGGCAAATAAGGTAGCCGGATTACCTGACATAGAGCTCAAGTTCCTTGCCTACTAC
CTGCATCAACGAGGGTCGAAGGTCGTTGAGAGGAGGCTAGATGCCCACGTATCGCATCACCGAAAGGTCCAAGAAGTCCT
CACGACCAATGACCCGGACGCGAGCGAGCAGAAGCCGTCAGCGTCGAAAGCGGCGCGTAGGTCGACAAAGGACCGCCCGG
CCTCACGAAGCATCTCCGTGTCTTTGGAAGGGTTGGATGACTACGGGCAGGAATTGAGGGAAGGAGGTAGAGATGCCATC
TAG

Upstream 100 bases:

>100_bases
TTTAATTGCCGCGTCTTCCACAGACCGACGCGTGCATTCTGCTCTCAGATTTTTCCCCTTGTCAAGGCAGGGCGGGCATC
GCTTTGCCTGAGGAGCCGAA

Downstream 100 bases:

>100_bases
CCGAGTCCTTCTTCATCCAAAGTTCCAGTCCACGGAGCGCGATCTAGCGGCGACGCTCACGTTGGCCCAACCTGGAAGCC
TCGTGTTCTTGATCGGCATA

Product: putative transposase

Products: NA

Alternate protein names: Transposase; Integrase Catalytic Subunit; TnsA Endonuclease

Number of amino acids: Translated: 800; Mature: 800

Protein sequence:

>800_residues
MHELELRACFERAALTGPQIEHLLAMIAEAPSRRPGGAALNNVIAQFWSDKNKASIWIESHTVERLFAYELELDPSVLAY
YSQIPCRGIERRSANGRRHLGNATADFLVIRADSVTVVECKAALRIESLLQQKPLEWVRSDDGVIERPALTSWASAWGLN
YAVWVQPSPFACLLANLELLYSIKPPDEPGKAHRQALRQLERSSLTIWELTRRVSGLTPLAVHQLLRMGLVCGTIKSQPI
ALTEAFRLFLDPQQRSAAEATAAQLADHRFRQHCDPVSTSSYRDLCAGRQRLETLKAMRLGNSVFTRRYRELDRVVRQAE
VDGVSELEACLTNYRRSGNRRARLTRTQTLAVDLAVRNWDAGKAHSRGHAYAEHVAHCQDVSCEPVSRTTLYRRLSAANA
SRRALLTGGLREYQKNREATDPRYRSMASQILGLRIHIDSTQIDARVFPGVEDKLLLDRPIIYVAVDSATSFPVCYELAF
GPARSDALAALLRTYVRTTGSLPSIIQVDRGSENRSSWLSAFCTEYHITLLIHPTGASVFNSAAENWLGRINSRLHSLPG
STIPDKKGRSVDGRFKSRQTARLQFSALHEVVNDAIELLRDVPGADGESPIERKARLVDETGIAGHAVEIDDNFLFHSSI
PTRASALDPKRGIKTERTRYASSELLQAARRGDVIEVRRDCEDPTVMHVQMSSGRCKAWSGMANKVAGLPDIELKFLAYY
LHQRGSKVVERRLDAHVSHHRKVQEVLTTNDPDASEQKPSASKAARRSTKDRPASRSISVSLEGLDDYGQELREGGRDAI

Sequences:

>Translated_800_residues
MHELELRACFERAALTGPQIEHLLAMIAEAPSRRPGGAALNNVIAQFWSDKNKASIWIESHTVERLFAYELELDPSVLAY
YSQIPCRGIERRSANGRRHLGNATADFLVIRADSVTVVECKAALRIESLLQQKPLEWVRSDDGVIERPALTSWASAWGLN
YAVWVQPSPFACLLANLELLYSIKPPDEPGKAHRQALRQLERSSLTIWELTRRVSGLTPLAVHQLLRMGLVCGTIKSQPI
ALTEAFRLFLDPQQRSAAEATAAQLADHRFRQHCDPVSTSSYRDLCAGRQRLETLKAMRLGNSVFTRRYRELDRVVRQAE
VDGVSELEACLTNYRRSGNRRARLTRTQTLAVDLAVRNWDAGKAHSRGHAYAEHVAHCQDVSCEPVSRTTLYRRLSAANA
SRRALLTGGLREYQKNREATDPRYRSMASQILGLRIHIDSTQIDARVFPGVEDKLLLDRPIIYVAVDSATSFPVCYELAF
GPARSDALAALLRTYVRTTGSLPSIIQVDRGSENRSSWLSAFCTEYHITLLIHPTGASVFNSAAENWLGRINSRLHSLPG
STIPDKKGRSVDGRFKSRQTARLQFSALHEVVNDAIELLRDVPGADGESPIERKARLVDETGIAGHAVEIDDNFLFHSSI
PTRASALDPKRGIKTERTRYASSELLQAARRGDVIEVRRDCEDPTVMHVQMSSGRCKAWSGMANKVAGLPDIELKFLAYY
LHQRGSKVVERRLDAHVSHHRKVQEVLTTNDPDASEQKPSASKAARRSTKDRPASRSISVSLEGLDDYGQELREGGRDAI
>Mature_800_residues
MHELELRACFERAALTGPQIEHLLAMIAEAPSRRPGGAALNNVIAQFWSDKNKASIWIESHTVERLFAYELELDPSVLAY
YSQIPCRGIERRSANGRRHLGNATADFLVIRADSVTVVECKAALRIESLLQQKPLEWVRSDDGVIERPALTSWASAWGLN
YAVWVQPSPFACLLANLELLYSIKPPDEPGKAHRQALRQLERSSLTIWELTRRVSGLTPLAVHQLLRMGLVCGTIKSQPI
ALTEAFRLFLDPQQRSAAEATAAQLADHRFRQHCDPVSTSSYRDLCAGRQRLETLKAMRLGNSVFTRRYRELDRVVRQAE
VDGVSELEACLTNYRRSGNRRARLTRTQTLAVDLAVRNWDAGKAHSRGHAYAEHVAHCQDVSCEPVSRTTLYRRLSAANA
SRRALLTGGLREYQKNREATDPRYRSMASQILGLRIHIDSTQIDARVFPGVEDKLLLDRPIIYVAVDSATSFPVCYELAF
GPARSDALAALLRTYVRTTGSLPSIIQVDRGSENRSSWLSAFCTEYHITLLIHPTGASVFNSAAENWLGRINSRLHSLPG
STIPDKKGRSVDGRFKSRQTARLQFSALHEVVNDAIELLRDVPGADGESPIERKARLVDETGIAGHAVEIDDNFLFHSSI
PTRASALDPKRGIKTERTRYASSELLQAARRGDVIEVRRDCEDPTVMHVQMSSGRCKAWSGMANKVAGLPDIELKFLAYY
LHQRGSKVVERRLDAHVSHHRKVQEVLTTNDPDASEQKPSASKAARRSTKDRPASRSISVSLEGLDDYGQELREGGRDAI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 89303; Mature: 89303

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHELELRACFERAALTGPQIEHLLAMIAEAPSRRPGGAALNNVIAQFWSDKNKASIWIES
CCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEH
HTVERLFAYELELDPSVLAYYSQIPCRGIERRSANGRRHLGNATADFLVIRADSVTVVEC
HHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHCCCCCCHHCCCCCCCEEEEEECCEEEEHH
KAALRIESLLQQKPLEWVRSDDGVIERPALTSWASAWGLNYAVWVQPSPFACLLANLELL
HHHHHHHHHHHHCCHHHHCCCCCCEECCCHHHHHHHCCCCEEEEECCCCHHHHHHCHHHE
YSIKPPDEPGKAHRQALRQLERSSLTIWELTRRVSGLTPLAVHQLLRMGLVCGTIKSQPI
EEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCC
ALTEAFRLFLDPQQRSAAEATAAQLADHRFRQHCDPVSTSSYRDLCAGRQRLETLKAMRL
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
GNSVFTRRYRELDRVVRQAEVDGVSELEACLTNYRRSGNRRARLTRTQTLAVDLAVRNWD
CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEHHEEEEEEEEECCC
AGKAHSRGHAYAEHVAHCQDVSCEPVSRTTLYRRLSAANASRRALLTGGLREYQKNREAT
CCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC
DPRYRSMASQILGLRIHIDSTQIDARVFPGVEDKLLLDRPIIYVAVDSATSFPVCYELAF
CHHHHHHHHHHHEEEEEECCCEECCEECCCCCCCEEECCCEEEEEECCCCCCCEEEEECC
GPARSDALAALLRTYVRTTGSLPSIIQVDRGSENRSSWLSAFCTEYHITLLIHPTGASVF
CCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHCEEEEEEEECCCHHHH
NSAAENWLGRINSRLHSLPGSTIPDKKGRSVDGRFKSRQTARLQFSALHEVVNDAIELLR
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHH
DVPGADGESPIERKARLVDETGIAGHAVEIDDNFLFHSSIPTRASALDPKRGIKTERTRY
HCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCEEEECCCCCCHHCCCCCCCCCHHHHHH
ASSELLQAARRGDVIEVRRDCEDPTVMHVQMSSGRCKAWSGMANKVAGLPDIELKFLAYY
HHHHHHHHHHCCCEEEHHHCCCCCEEEEEEECCCCCCHHCCHHHHHCCCCCHHHHHHHHH
LHQRGSKVVERRLDAHVSHHRKVQEVLTTNDPDASEQKPSASKAARRSTKDRPASRSISV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEEE
SLEGLDDYGQELREGGRDAI
EECCCHHHHHHHHCCCCCCC
>Mature Secondary Structure
MHELELRACFERAALTGPQIEHLLAMIAEAPSRRPGGAALNNVIAQFWSDKNKASIWIES
CCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEH
HTVERLFAYELELDPSVLAYYSQIPCRGIERRSANGRRHLGNATADFLVIRADSVTVVEC
HHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHCCCCCCHHCCCCCCCEEEEEECCEEEEHH
KAALRIESLLQQKPLEWVRSDDGVIERPALTSWASAWGLNYAVWVQPSPFACLLANLELL
HHHHHHHHHHHHCCHHHHCCCCCCEECCCHHHHHHHCCCCEEEEECCCCHHHHHHCHHHE
YSIKPPDEPGKAHRQALRQLERSSLTIWELTRRVSGLTPLAVHQLLRMGLVCGTIKSQPI
EEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCC
ALTEAFRLFLDPQQRSAAEATAAQLADHRFRQHCDPVSTSSYRDLCAGRQRLETLKAMRL
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
GNSVFTRRYRELDRVVRQAEVDGVSELEACLTNYRRSGNRRARLTRTQTLAVDLAVRNWD
CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEHHEEEEEEEEECCC
AGKAHSRGHAYAEHVAHCQDVSCEPVSRTTLYRRLSAANASRRALLTGGLREYQKNREAT
CCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC
DPRYRSMASQILGLRIHIDSTQIDARVFPGVEDKLLLDRPIIYVAVDSATSFPVCYELAF
CHHHHHHHHHHHEEEEEECCCEECCEECCCCCCCEEECCCEEEEEECCCCCCCEEEEECC
GPARSDALAALLRTYVRTTGSLPSIIQVDRGSENRSSWLSAFCTEYHITLLIHPTGASVF
CCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHCEEEEEEEECCCHHHH
NSAAENWLGRINSRLHSLPGSTIPDKKGRSVDGRFKSRQTARLQFSALHEVVNDAIELLR
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHH
DVPGADGESPIERKARLVDETGIAGHAVEIDDNFLFHSSIPTRASALDPKRGIKTERTRY
HCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCEEEECCCCCCHHCCCCCCCCCHHHHHH
ASSELLQAARRGDVIEVRRDCEDPTVMHVQMSSGRCKAWSGMANKVAGLPDIELKFLAYY
HHHHHHHHHHCCCEEEHHHCCCCCEEEEEEECCCCCCHHCCHHHHHCCCCCHHHHHHHHH
LHQRGSKVVERRLDAHVSHHRKVQEVLTTNDPDASEQKPSASKAARRSTKDRPASRSISV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEEE
SLEGLDDYGQELREGGRDAI
EECCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA