| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78045776
Identifier: 78045776
GI number: 78045776
Start: 258819
End: 261017
Strand: Reverse
Name: 78045776
Synonym: XCV0220
Alternate gene names: NA
Gene position: 261017-258819 (Counterclockwise)
Preceding gene: 78045778
Following gene: 78045770
Centisome position: 5.04
GC content: 56.57
Gene sequence:
>2199_bases ATGGCCAGGAAGTTCGACTTGGAGTCTGATGTTGTCAGGTGGCTGGTTACGCAGATTCAGGATGGACTGCTGCTTGATGA AATCGATGGGCGCGATAGCATCACCGCACTAGCTGGGATGGGAAGCCAAGAGAACTTCCTCCCGGCTTTTGGCATCGACC ACTTCTCCCGCAGAGCTTCCGCCGATGCGGCTGCCAATGTGCTGGAGCATCTGGGCTCACTTGAGATCATCTCGGTTGAC ACAAGCATATCCTTGACGACCGGCGAGGTCCTCCGGCCGGACATCCTTTGCTTCAACCAAGAGACAAGGACACTGGTGGT CTTCGAGGTCAAGCGGGCCACGGATACTGAGCGGCAGACTGTCACCGAGCTTGCAGGGTACGAGCAGGAGCTTCGGAACG CGGCGCCGTTTCTCGGCACCTACGACGTACTATTTGTCGTTGTGGCTGCGAACTGGTCACCGCTGCTGACACATGCCGTT GGGAACATGAACGCTTGGTCGGGAAAACAATACCTAGGCCTGAAGATAGCCCCGGCGACGAGCGGCTTTCGCCTAACAGT CGAGATCCCCGAGGCTTGGCACCTGACTGGTGCTCTGTGCTTGCCCGGTGAGGCACTGCCGTCCATCGATCTCTACCTTT GGCCCAAGGATCATGAAACCTGCCGCTCAGATGATCAGGAAGGATGCGGTGCTGCTGCTGACTTGGGGGGCGTTGATGAT GCCAGCCGGTACCCTGCCAGGATCGTACTCACAGCAATGGAAATGATTGCACGGGAGGGCGATCGCACAGGGGCGCATGG TTTCATGATGTTGTGGCGCGACGCTGGAGCGTACGGCTCGGGTTGCTGGTGCTTGACACTGACCACGGTGGATCCCTACG CGATGTCAGCATGGGCGACTGACAATGGTCTGCCACAGCGCTCTTCAGAGGCTACGCAGTACTTCCGCTCTAGTGTTGAG TCAGGCAGCGCACCCCGGTCTCTCTATGGCATTGCCAGAGCGGCACTCACTCTGCTGCGCGAAAGTTTTGAGACAGGGTT TGAAAGCGATCTTCTGTGGGCGGTAAAGGCACACGGGCTAAGGCAGAGGGCTGTGCCCGTTCGGTTCGATTTCTGGGGAA GCCTGGGGCGCTACGCCCGGGAGTTTGTAGCAAATCCTGCAGTCCGCCAGAATTACATGCCCTTCATTTCCGCCAGCCAA CTAGACTGGACTGATCCCGTAGTGGGAATGACCTTAGTGTCCAACCTTACAGCTGGATCACCATTTCCCAACGGCCTGAT TGGCTGTGAAGAGGCTTTTGCCGTCGGACGTACTCTTGGTGACCTCGGCATTGCCGCACATAGCTCATCGCAGAGCCACC AGCATGCCGCGGTGCTTGAACCTATGCTCGAGTGGTCGCAGCTTGAAGCGGTCAGGTATGGGGTCGAGATGCTGCAGATG TCCAATGCCAGCATAGAAGTGGTAAAGCCAATGCCGACGCTATCAAACAGATCAGAACAGCGACTGGAGAGACTCCAGGA GCTAGTCGACTGGGTTGCACTTGATCTGATTGGCTCGGATCACCCTGCTCATCAGGCATGTTTTGAGATTGGGTTTTCCA ACGCACTTCTATTCGACTGGATAGAGGATGGTGCCGCTGATCCTTATGCGGGGCCGGCTGCTACAGAGGCAGCGAAAAGT GCTCGTCGAGTTCTGGAGTTCGCGCTGAAGCAAGCGGATGGTAGTCAAGGACAAGCATTCAAGTCCGCTCCGTTTCTGGA TTTGGTGGAACTTGTAGGACTGGCTGACGGTGAGGCGAAGAACTGCGGTGAGAGTGTCGGCTCACTCACCGCCAAGCTCG ATGACCAAAGACTACTTGAGTCCTTTGCTTCTGTGGTTCTGCCAGGCATTGACTCGATCATTCCTAGGGTCCTGCACACC GTGCGAGCACCGTTTCACACCCTAGTCGACTGGGACTACCTAAAGTCCGGAGTGAGGGCCTTATTTGAATCTGGAGTCCG GCACCCAGCTGTGCTGTTCGCGCAAGACGGGACGATCGGAACCGGCCAAATGTCCTCGCCGTTTAATATGGGCAGTCCGG TAGCGGACCCAAGTGTTGAGGTCTATGTTTTGGATATGTCTGCGGCAAGTGCCATAGCGATCAAGATGACGTGGGACAAG GTCGAAGAGTTCCACGCCAAGCGGTCTACCAGAAGCTAA
Upstream 100 bases:
>100_bases GTGAACCCTGCCAGTGAGGACATCTGGTACCAGCGGCCTTGGGCCTGAGACCGCCTTGAGTGCAGGTCAAGATCAATAGA TTTTTGCGGAGTGTGCCTAG
Downstream 100 bases:
>100_bases AGATCATGGACCAGTCACTGAGTCGTGCTTCCCGTGAGTTGAGCGAAGCCGGTTGCGATGTACCTCAATACGTGCAGCGG GACGGCACCGTCACCGATGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 732; Mature: 731
Protein sequence:
>732_residues MARKFDLESDVVRWLVTQIQDGLLLDEIDGRDSITALAGMGSQENFLPAFGIDHFSRRASADAAANVLEHLGSLEIISVD TSISLTTGEVLRPDILCFNQETRTLVVFEVKRATDTERQTVTELAGYEQELRNAAPFLGTYDVLFVVVAANWSPLLTHAV GNMNAWSGKQYLGLKIAPATSGFRLTVEIPEAWHLTGALCLPGEALPSIDLYLWPKDHETCRSDDQEGCGAAADLGGVDD ASRYPARIVLTAMEMIAREGDRTGAHGFMMLWRDAGAYGSGCWCLTLTTVDPYAMSAWATDNGLPQRSSEATQYFRSSVE SGSAPRSLYGIARAALTLLRESFETGFESDLLWAVKAHGLRQRAVPVRFDFWGSLGRYAREFVANPAVRQNYMPFISASQ LDWTDPVVGMTLVSNLTAGSPFPNGLIGCEEAFAVGRTLGDLGIAAHSSSQSHQHAAVLEPMLEWSQLEAVRYGVEMLQM SNASIEVVKPMPTLSNRSEQRLERLQELVDWVALDLIGSDHPAHQACFEIGFSNALLFDWIEDGAADPYAGPAATEAAKS ARRVLEFALKQADGSQGQAFKSAPFLDLVELVGLADGEAKNCGESVGSLTAKLDDQRLLESFASVVLPGIDSIIPRVLHT VRAPFHTLVDWDYLKSGVRALFESGVRHPAVLFAQDGTIGTGQMSSPFNMGSPVADPSVEVYVLDMSAASAIAIKMTWDK VEEFHAKRSTRS
Sequences:
>Translated_732_residues MARKFDLESDVVRWLVTQIQDGLLLDEIDGRDSITALAGMGSQENFLPAFGIDHFSRRASADAAANVLEHLGSLEIISVD TSISLTTGEVLRPDILCFNQETRTLVVFEVKRATDTERQTVTELAGYEQELRNAAPFLGTYDVLFVVVAANWSPLLTHAV GNMNAWSGKQYLGLKIAPATSGFRLTVEIPEAWHLTGALCLPGEALPSIDLYLWPKDHETCRSDDQEGCGAAADLGGVDD ASRYPARIVLTAMEMIAREGDRTGAHGFMMLWRDAGAYGSGCWCLTLTTVDPYAMSAWATDNGLPQRSSEATQYFRSSVE SGSAPRSLYGIARAALTLLRESFETGFESDLLWAVKAHGLRQRAVPVRFDFWGSLGRYAREFVANPAVRQNYMPFISASQ LDWTDPVVGMTLVSNLTAGSPFPNGLIGCEEAFAVGRTLGDLGIAAHSSSQSHQHAAVLEPMLEWSQLEAVRYGVEMLQM SNASIEVVKPMPTLSNRSEQRLERLQELVDWVALDLIGSDHPAHQACFEIGFSNALLFDWIEDGAADPYAGPAATEAAKS ARRVLEFALKQADGSQGQAFKSAPFLDLVELVGLADGEAKNCGESVGSLTAKLDDQRLLESFASVVLPGIDSIIPRVLHT VRAPFHTLVDWDYLKSGVRALFESGVRHPAVLFAQDGTIGTGQMSSPFNMGSPVADPSVEVYVLDMSAASAIAIKMTWDK VEEFHAKRSTRS >Mature_731_residues ARKFDLESDVVRWLVTQIQDGLLLDEIDGRDSITALAGMGSQENFLPAFGIDHFSRRASADAAANVLEHLGSLEIISVDT SISLTTGEVLRPDILCFNQETRTLVVFEVKRATDTERQTVTELAGYEQELRNAAPFLGTYDVLFVVVAANWSPLLTHAVG NMNAWSGKQYLGLKIAPATSGFRLTVEIPEAWHLTGALCLPGEALPSIDLYLWPKDHETCRSDDQEGCGAAADLGGVDDA SRYPARIVLTAMEMIAREGDRTGAHGFMMLWRDAGAYGSGCWCLTLTTVDPYAMSAWATDNGLPQRSSEATQYFRSSVES GSAPRSLYGIARAALTLLRESFETGFESDLLWAVKAHGLRQRAVPVRFDFWGSLGRYAREFVANPAVRQNYMPFISASQL DWTDPVVGMTLVSNLTAGSPFPNGLIGCEEAFAVGRTLGDLGIAAHSSSQSHQHAAVLEPMLEWSQLEAVRYGVEMLQMS NASIEVVKPMPTLSNRSEQRLERLQELVDWVALDLIGSDHPAHQACFEIGFSNALLFDWIEDGAADPYAGPAATEAAKSA RRVLEFALKQADGSQGQAFKSAPFLDLVELVGLADGEAKNCGESVGSLTAKLDDQRLLESFASVVLPGIDSIIPRVLHTV RAPFHTLVDWDYLKSGVRALFESGVRHPAVLFAQDGTIGTGQMSSPFNMGSPVADPSVEVYVLDMSAASAIAIKMTWDKV EEFHAKRSTRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 79610; Mature: 79478
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARKFDLESDVVRWLVTQIQDGLLLDEIDGRDSITALAGMGSQENFLPAFGIDHFSRRAS CCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHH ADAAANVLEHLGSLEIISVDTSISLTTGEVLRPDILCFNQETRTLVVFEVKRATDTERQT HHHHHHHHHHHCCEEEEEECCEEEECCCCCCCCCEEEECCCCCEEEEEEECCCCCHHHHH VTELAGYEQELRNAAPFLGTYDVLFVVVAANWSPLLTHAVGNMNAWSGKQYLGLKIAPAT HHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCEEEEEEEECCC SGFRLTVEIPEAWHLTGALCLPGEALPSIDLYLWPKDHETCRSDDQEGCGAAADLGGVDD CCEEEEEECCCCCCCCCEEECCCCCCCCCEEEECCCCCHHHCCCCCCCCCCHHCCCCCCC ASRYPARIVLTAMEMIAREGDRTGAHGFMMLWRDAGAYGSGCWCLTLTTVDPYAMSAWAT CCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCHHHEEECC DNGLPQRSSEATQYFRSSVESGSAPRSLYGIARAALTLLRESFETGFESDLLWAVKAHGL CCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCC RQRAVPVRFDFWGSLGRYAREFVANPAVRQNYMPFISASQLDWTDPVVGMTLVSNLTAGS HHCCCCEEEHHHHHHHHHHHHHHCCCHHHHCCCCCEECCCCCCCCCHHHHHHHHHCCCCC PFPNGLIGCEEAFAVGRTLGDLGIAAHSSSQSHQHAAVLEPMLEWSQLEAVRYGVEMLQM CCCCCCCCHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SNASIEVVKPMPTLSNRSEQRLERLQELVDWVALDLIGSDHPAHQACFEIGFSNALLFDW CCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEHH IEDGAADPYAGPAATEAAKSARRVLEFALKQADGSQGQAFKSAPFLDLVELVGLADGEAK HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCHH NCGESVGSLTAKLDDQRLLESFASVVLPGIDSIIPRVLHTVRAPFHTLVDWDYLKSGVRA HHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH LFESGVRHPAVLFAQDGTIGTGQMSSPFNMGSPVADPSVEVYVLDMSAASAIAIKMTWDK HHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEHHH VEEFHAKRSTRS HHHHHHHHCCCC >Mature Secondary Structure ARKFDLESDVVRWLVTQIQDGLLLDEIDGRDSITALAGMGSQENFLPAFGIDHFSRRAS CCCCCCHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHH ADAAANVLEHLGSLEIISVDTSISLTTGEVLRPDILCFNQETRTLVVFEVKRATDTERQT HHHHHHHHHHHCCEEEEEECCEEEECCCCCCCCCEEEECCCCCEEEEEEECCCCCHHHHH VTELAGYEQELRNAAPFLGTYDVLFVVVAANWSPLLTHAVGNMNAWSGKQYLGLKIAPAT HHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCEEEEEEEECCC SGFRLTVEIPEAWHLTGALCLPGEALPSIDLYLWPKDHETCRSDDQEGCGAAADLGGVDD CCEEEEEECCCCCCCCCEEECCCCCCCCCEEEECCCCCHHHCCCCCCCCCCHHCCCCCCC ASRYPARIVLTAMEMIAREGDRTGAHGFMMLWRDAGAYGSGCWCLTLTTVDPYAMSAWAT CCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCHHHEEECC DNGLPQRSSEATQYFRSSVESGSAPRSLYGIARAALTLLRESFETGFESDLLWAVKAHGL CCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCC RQRAVPVRFDFWGSLGRYAREFVANPAVRQNYMPFISASQLDWTDPVVGMTLVSNLTAGS HHCCCCEEEHHHHHHHHHHHHHHCCCHHHHCCCCCEECCCCCCCCCHHHHHHHHHCCCCC PFPNGLIGCEEAFAVGRTLGDLGIAAHSSSQSHQHAAVLEPMLEWSQLEAVRYGVEMLQM CCCCCCCCHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SNASIEVVKPMPTLSNRSEQRLERLQELVDWVALDLIGSDHPAHQACFEIGFSNALLFDW CCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEHH IEDGAADPYAGPAATEAAKSARRVLEFALKQADGSQGQAFKSAPFLDLVELVGLADGEAK HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCHH NCGESVGSLTAKLDDQRLLESFASVVLPGIDSIIPRVLHTVRAPFHTLVDWDYLKSGVRA HHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH LFESGVRHPAVLFAQDGTIGTGQMSSPFNMGSPVADPSVEVYVLDMSAASAIAIKMTWDK HHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEHHH VEEFHAKRSTRS HHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA