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The map label for this gene is yibP [H]

Identifier: 78045581

GI number: 78045581

Start: 26511

End: 27746

Strand: Reverse

Name: yibP [H]

Synonym: XCV0025

Alternate gene names: 78045581

Gene position: 27746-26511 (Counterclockwise)

Preceding gene: 78045584

Following gene: 78045580

Centisome position: 0.54

GC content: 67.56

Gene sequence:

>1236_bases
ATGTGGCTGGCGGCGGGTGTGCTGGCCTGCACGTTGCTGGGCAGCGTGGGCGCAAGCGCGCAGAGCCAGCGCGAGACCGA
GCGCAAACTGCAGCAGCTGCGCGATGAGCTCAAGACCATCAGCGCCGATCGGCGCGAACTGGAAGGCAAACGCGGCACTG
CTGCGCAACAGCTACGCCAGGCCGACGAGAAAGTGGCCAAGACCGCACGCGCCTTGAGCGAAACCGAAGCGGCGATGCGC
GCGCAGGAACAGCATCTGTCCACCCTGCAGCAGGAACGCGCGCAGTTGCAGCGCGGCCTGCAGAGCCAGCGCACGCAGCT
GGCAGCATTGTTGCGCGCTGCCGATCAGGTGGGCCGCAATGCACCGTTGAAGGTGCTGCTGTCGCAGGACACGGTGGGCG
ATGCCACGCGCATGCTGGCCGATCACCGCTATGTGCAAAACGCACGTGCGCAACGCATCCACGCCCTGACCACGCAACTG
GATACCCTGGCGAAAGTGGAACAGGACATCGCCACCCGGCGCCAGGCGCTGGATGCCGCACGCGCGCAGCAGAAGGCGCA
GGCGGCCACGCTGCAGAAGGACCGCTCGCAACAGGCGGCCACCGTCGCGCAGCTGGACGATCGCTACAAGCAGCGCGCCG
AGCGCGAAAAGGCAATCGGCCAGGACGCCAAGGCGCTGGAACAACTGCTCGCCAATCTGCGCGCAGCGGCCGCCAAGGCC
GAAGCCGAACGGCGCGCTGCCGCAAAACGCGCTGCCGCCGAAGCCGCCGCGCAGGCCAAACGCAGCAAAACCGAGCGTTC
CGATCGCCCCGGCAAGACCCCGCCCAAGGTGGTCGCCAACGCACCGGCCCCCAAGGTCGGTGGGCTCAGCTGGCCAGTGG
CGGGCAATCTGCTGGCGCGCTTCAACGCCACCTTGCCCGATGGCCACACCAGCAAGGGCGTGCTGATCGGCGCGCCTAAG
GGCACCACCGTGACCGCAGTGGCCGATGGCACGGTGGTGTTTTCCGACTGGATGACCGGCTACGGCATGATCCTGATCGT
GGACCACGGCAACGGCTACATGAGCCTGTATGCGCATAACGACACCTTGCTGCGCGATGCCGGCGCATCGATCAAACGTG
GCGACGCGGTCGCCAAGGTCGGCAGTTCGGGCGGGCAGGGCGTGCCGGCGCTGTACTTCGAATTGCGACGCAACGGGCAG
CCGGTGGATCCATCGAGCTGGCTGCAACGCCGCTGA

Upstream 100 bases:

>100_bases
ACAATCGCGCACCTGCCTGAAGTCACTGGATCTTTCGTTGCCCCCTTCGTCCGCACCGCTGCCGCGCCTGCCGCTCGCTC
CCGCCACCGGCCGTGGGCGG

Downstream 100 bases:

>100_bases
GCGCCGCGCACCGCCCGCGATTCAACGCGGATTTACCGCTGCTTCGCGCATAATCCGGTCAGCTCCGCGCTGCGGGGCGC
CTTATCTCTTTGTCGGAGTG

Product: putative peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 411; Mature: 411

Protein sequence:

>411_residues
MWLAAGVLACTLLGSVGASAQSQRETERKLQQLRDELKTISADRRELEGKRGTAAQQLRQADEKVAKTARALSETEAAMR
AQEQHLSTLQQERAQLQRGLQSQRTQLAALLRAADQVGRNAPLKVLLSQDTVGDATRMLADHRYVQNARAQRIHALTTQL
DTLAKVEQDIATRRQALDAARAQQKAQAATLQKDRSQQAATVAQLDDRYKQRAEREKAIGQDAKALEQLLANLRAAAAKA
EAERRAAAKRAAAEAAAQAKRSKTERSDRPGKTPPKVVANAPAPKVGGLSWPVAGNLLARFNATLPDGHTSKGVLIGAPK
GTTVTAVADGTVVFSDWMTGYGMILIVDHGNGYMSLYAHNDTLLRDAGASIKRGDAVAKVGSSGGQGVPALYFELRRNGQ
PVDPSSWLQRR

Sequences:

>Translated_411_residues
MWLAAGVLACTLLGSVGASAQSQRETERKLQQLRDELKTISADRRELEGKRGTAAQQLRQADEKVAKTARALSETEAAMR
AQEQHLSTLQQERAQLQRGLQSQRTQLAALLRAADQVGRNAPLKVLLSQDTVGDATRMLADHRYVQNARAQRIHALTTQL
DTLAKVEQDIATRRQALDAARAQQKAQAATLQKDRSQQAATVAQLDDRYKQRAEREKAIGQDAKALEQLLANLRAAAAKA
EAERRAAAKRAAAEAAAQAKRSKTERSDRPGKTPPKVVANAPAPKVGGLSWPVAGNLLARFNATLPDGHTSKGVLIGAPK
GTTVTAVADGTVVFSDWMTGYGMILIVDHGNGYMSLYAHNDTLLRDAGASIKRGDAVAKVGSSGGQGVPALYFELRRNGQ
PVDPSSWLQRR
>Mature_411_residues
MWLAAGVLACTLLGSVGASAQSQRETERKLQQLRDELKTISADRRELEGKRGTAAQQLRQADEKVAKTARALSETEAAMR
AQEQHLSTLQQERAQLQRGLQSQRTQLAALLRAADQVGRNAPLKVLLSQDTVGDATRMLADHRYVQNARAQRIHALTTQL
DTLAKVEQDIATRRQALDAARAQQKAQAATLQKDRSQQAATVAQLDDRYKQRAEREKAIGQDAKALEQLLANLRAAAAKA
EAERRAAAKRAAAEAAAQAKRSKTERSDRPGKTPPKVVANAPAPKVGGLSWPVAGNLLARFNATLPDGHTSKGVLIGAPK
GTTVTAVADGTVVFSDWMTGYGMILIVDHGNGYMSLYAHNDTLLRDAGASIKRGDAVAKVGSSGGQGVPALYFELRRNGQ
PVDPSSWLQRR

Specific function: Unknown

COG id: COG4942

COG function: function code D; Membrane-bound metallopeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0756 [H]

Homologues:

Organism=Escherichia coli, GI87082297, Length=424, Percent_Identity=33.0188679245283, Blast_Score=184, Evalue=9e-48,
Organism=Escherichia coli, GI1789099, Length=122, Percent_Identity=37.7049180327869, Blast_Score=82, Evalue=5e-17,
Organism=Escherichia coli, GI87082174, Length=183, Percent_Identity=30.0546448087432, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI87081989, Length=93, Percent_Identity=35.4838709677419, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 44306; Mature: 44306

Theoretical pI: Translated: 10.84; Mature: 10.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWLAAGVLACTLLGSVGASAQSQRETERKLQQLRDELKTISADRRELEGKRGTAAQQLRQ
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
ADEKVAKTARALSETEAAMRAQEQHLSTLQQERAQLQRGLQSQRTQLAALLRAADQVGRN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
APLKVLLSQDTVGDATRMLADHRYVQNARAQRIHALTTQLDTLAKVEQDIATRRQALDAA
CCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAQQKAQAATLQKDRSQQAATVAQLDDRYKQRAEREKAIGQDAKALEQLLANLRAAAAKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
EAERRAAAKRAAAEAAAQAKRSKTERSDRPGKTPPKVVANAPAPKVGGLSWPVAGNLLAR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHH
FNATLPDGHTSKGVLIGAPKGTTVTAVADGTVVFSDWMTGYGMILIVDHGNGYMSLYAHN
HCCCCCCCCCCCCEEEECCCCCEEEEEECCCEEEECHHHCCCEEEEEECCCCEEEEEECC
DTLLRDAGASIKRGDAVAKVGSSGGQGVPALYFELRRNGQPVDPSSWLQRR
CHHHHHCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHCCC
>Mature Secondary Structure
MWLAAGVLACTLLGSVGASAQSQRETERKLQQLRDELKTISADRRELEGKRGTAAQQLRQ
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
ADEKVAKTARALSETEAAMRAQEQHLSTLQQERAQLQRGLQSQRTQLAALLRAADQVGRN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
APLKVLLSQDTVGDATRMLADHRYVQNARAQRIHALTTQLDTLAKVEQDIATRRQALDAA
CCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAQQKAQAATLQKDRSQQAATVAQLDDRYKQRAEREKAIGQDAKALEQLLANLRAAAAKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
EAERRAAAKRAAAEAAAQAKRSKTERSDRPGKTPPKVVANAPAPKVGGLSWPVAGNLLAR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHH
FNATLPDGHTSKGVLIGAPKGTTVTAVADGTVVFSDWMTGYGMILIVDHGNGYMSLYAHN
HCCCCCCCCCCCCEEEECCCCCEEEEEECCCEEEECHHHCCCEEEEEECCCCEEEEEECC
DTLLRDAGASIKRGDAVAKVGSSGGQGVPALYFELRRNGQPVDPSSWLQRR
CHHHHHCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]