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The map label for this gene is ctp [H]

Identifier: 78045580

GI number: 78045580

Start: 24877

End: 26406

Strand: Reverse

Name: ctp [H]

Synonym: XCV0024

Alternate gene names: 78045580

Gene position: 26406-24877 (Counterclockwise)

Preceding gene: 78045581

Following gene: 78045576

Centisome position: 0.51

GC content: 68.24

Gene sequence:

>1530_bases
ATGCGCGTAGCCGTCCTGTCCGTTGCCCTGTCGCTGGCCCTGTTCGCGTCGCCTGGTTGGGCGCAGAAGGCCGGCCCCGC
CGCCGCCCAGGCCAGCGCGGACGATCCGGAAGCCAATGAAGCCGCTGTTTCCAAGGTGCCGCTGGATGAGATCCGCCGTT
TCGTGGCGGTCTACAACGCGGTCAAGCAGGCCTACGTCGACCCGGTCGAAGACAAGAAGCTGATGCACTCCGCCGTGCGC
GGCCTGCTCTCGGACCTGGACCCGCACAGCACCTATTTCGACAAGGAAGATGCCGAAGCCTTCGACGAACAGGCCACCGG
CGCCTACGACGGCATCGGCGTGGAATTGCTACAGCAGCAGGACAACACCCTCAAGGTGATCGCGCCGATCGACGACACCC
CGGCCGCGCGCGCCGGCATCCGCGCCGGCGATGTGATCGTGGCCATCGACGGCAAGCCGATCGATGCCAGCAAGGCGATG
GAGCCGCTGCGCGGCGAATCCGGCAGCAAGGTCGTGTTGACCATCATGCGCGACAAGACGCCCAAGCCGTTCGATGTGAC
CCTTCAGCGCGAAACCATCCGCGTGGCCAGCGTGCGCAGCAAGCTGCTGGAGCCGGGCTACGGCTACATCCGCATCAGCA
CCTTCCAGGCCGACACCGGTGCCGATTTCCAGAAGAACCTCAAGCAGCTGCAGGCCGGCGGCAAGTTGCGCGGGCTGGTG
CTGGACCTGCGCAGCAACCCCGGCGGTCTGCTGACCTCGGCGGTGCAGGTGGCCGACGATCTGCTGGACAAGGGCAATAT
CGTCAGCACGCGCGGGCGCATCTCGATCAGCGATGCCAAGTTCGACGCCACTCCGGGCGATCTGCTGAGCGGCGCACCGG
TGGTGGTGCTGGTGGATGCCGGTTCGGCCAGTGCGTCGGAAGTGCTGGCCGGCGCGCTGCGCGATAACAAGCGCGCACGC
ATCATCGGCAGTCGCACCTTCGGCAAGGGCTCGGTGCAGACCGTGCTGCCGCTGGATAACGGCGACTCGGTCAAGCTCAC
CACCGCGCGCTATTACACCCCCAGCGGCAAGTCGATCCAGGCCAGCGGCATCATGCCGGACGTACTGCTCACCCCCGAAC
CGCAGCCCGGCGATGCCGATGTGCCGGCCAGCCTGACCGACTACAGCGAAGCCACCTTGCCGGGCCACCTGCGCGGCGAC
GACGAAGGCGAAGAGGGCTACAGCGCCGGCGACGTGCTGCCGGGCGACGGCCCGATCGCCGAAGCCCTGGCCGAACTCAA
GCAACCCGGCTCCGTCGCCAAGGCGCAGGCTGCACGCAAAGCCAAGGCGCAGGCCGCGCAGAAGGCCAAGCCAGCCAAGA
CCGGTGCCGATCCCAAGCCCGCCGCAGCGCGCCCGGCGACCACGGACAAGCCCACATCGGCCGAACCGGCAGGCAAGGCC
AAGCCGGCCACTGCACCCGCAGCGCCAGCCGAACCGGTGCAGCCGGCGCCGCCAAAGGACACGCCAGCGTCCACCGAACC
GGCCAACTGA

Upstream 100 bases:

>100_bases
CGCGCACCGCCCGCGATTCAACGCGGATTTACCGCTGCTTCGCGCATAATCCGGTCAGCTCCGCGCTGCGGGGCGCCTTA
TCTCTTTGTCGGAGTGCTTC

Downstream 100 bases:

>100_bases
GAGCGGCCCATGCAACGTCGTGGCCCGTCGTCAGGCGGGTTTGGTCGTCTCGCAGAGGATTGGTGTGGGAGTGGTGCATG
CGGCACCCAACATCAATCGC

Product: periplasmic carboxyl-terminal protease

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 509; Mature: 509

Protein sequence:

>509_residues
MRVAVLSVALSLALFASPGWAQKAGPAAAQASADDPEANEAAVSKVPLDEIRRFVAVYNAVKQAYVDPVEDKKLMHSAVR
GLLSDLDPHSTYFDKEDAEAFDEQATGAYDGIGVELLQQQDNTLKVIAPIDDTPAARAGIRAGDVIVAIDGKPIDASKAM
EPLRGESGSKVVLTIMRDKTPKPFDVTLQRETIRVASVRSKLLEPGYGYIRISTFQADTGADFQKNLKQLQAGGKLRGLV
LDLRSNPGGLLTSAVQVADDLLDKGNIVSTRGRISISDAKFDATPGDLLSGAPVVVLVDAGSASASEVLAGALRDNKRAR
IIGSRTFGKGSVQTVLPLDNGDSVKLTTARYYTPSGKSIQASGIMPDVLLTPEPQPGDADVPASLTDYSEATLPGHLRGD
DEGEEGYSAGDVLPGDGPIAEALAELKQPGSVAKAQAARKAKAQAAQKAKPAKTGADPKPAAARPATTDKPTSAEPAGKA
KPATAPAAPAEPVQPAPPKDTPASTEPAN

Sequences:

>Translated_509_residues
MRVAVLSVALSLALFASPGWAQKAGPAAAQASADDPEANEAAVSKVPLDEIRRFVAVYNAVKQAYVDPVEDKKLMHSAVR
GLLSDLDPHSTYFDKEDAEAFDEQATGAYDGIGVELLQQQDNTLKVIAPIDDTPAARAGIRAGDVIVAIDGKPIDASKAM
EPLRGESGSKVVLTIMRDKTPKPFDVTLQRETIRVASVRSKLLEPGYGYIRISTFQADTGADFQKNLKQLQAGGKLRGLV
LDLRSNPGGLLTSAVQVADDLLDKGNIVSTRGRISISDAKFDATPGDLLSGAPVVVLVDAGSASASEVLAGALRDNKRAR
IIGSRTFGKGSVQTVLPLDNGDSVKLTTARYYTPSGKSIQASGIMPDVLLTPEPQPGDADVPASLTDYSEATLPGHLRGD
DEGEEGYSAGDVLPGDGPIAEALAELKQPGSVAKAQAARKAKAQAAQKAKPAKTGADPKPAAARPATTDKPTSAEPAGKA
KPATAPAAPAEPVQPAPPKDTPASTEPAN
>Mature_509_residues
MRVAVLSVALSLALFASPGWAQKAGPAAAQASADDPEANEAAVSKVPLDEIRRFVAVYNAVKQAYVDPVEDKKLMHSAVR
GLLSDLDPHSTYFDKEDAEAFDEQATGAYDGIGVELLQQQDNTLKVIAPIDDTPAARAGIRAGDVIVAIDGKPIDASKAM
EPLRGESGSKVVLTIMRDKTPKPFDVTLQRETIRVASVRSKLLEPGYGYIRISTFQADTGADFQKNLKQLQAGGKLRGLV
LDLRSNPGGLLTSAVQVADDLLDKGNIVSTRGRISISDAKFDATPGDLLSGAPVVVLVDAGSASASEVLAGALRDNKRAR
IIGSRTFGKGSVQTVLPLDNGDSVKLTTARYYTPSGKSIQASGIMPDVLLTPEPQPGDADVPASLTDYSEATLPGHLRGD
DEGEEGYSAGDVLPGDGPIAEALAELKQPGSVAKAQAARKAKAQAAQKAKPAKTGADPKPAAARPATTDKPTSAEPAGKA
KPATAPAAPAEPVQPAPPKDTPASTEPAN

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=323, Percent_Identity=31.5789473684211, Blast_Score=121, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 52808; Mature: 52808

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVAVLSVALSLALFASPGWAQKAGPAAAQASADDPEANEAAVSKVPLDEIRRFVAVYNA
CCHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHH
VKQAYVDPVEDKKLMHSAVRGLLSDLDPHSTYFDKEDAEAFDEQATGAYDGIGVELLQQQ
HHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHCC
DNTLKVIAPIDDTPAARAGIRAGDVIVAIDGKPIDASKAMEPLRGESGSKVVLTIMRDKT
CCEEEEEECCCCCCHHHCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCEEEEEEEECCC
PKPFDVTLQRETIRVASVRSKLLEPGYGYIRISTFQADTGADFQKNLKQLQAGGKLRGLV
CCCEEEEEEHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCEEEEE
LDLRSNPGGLLTSAVQVADDLLDKGNIVSTRGRISISDAKFDATPGDLLSGAPVVVLVDA
EEECCCCCHHHHHHHHHHHHHHCCCCEEECCCEEEECCCCCCCCCHHHHCCCCEEEEEEC
GSASASEVLAGALRDNKRARIIGSRTFGKGSVQTVLPLDNGDSVKLTTARYYTPSGKSIQ
CCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEECCCCCEEEEEEEEEECCCCCEEE
ASGIMPDVLLTPEPQPGDADVPASLTDYSEATLPGHLRGDDEGEEGYSAGDVLPGDGPIA
ECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
EALAELKQPGSVAKAQAARKAKAQAAQKAKPAKTGADPKPAAARPATTDKPTSAEPAGKA
HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
KPATAPAAPAEPVQPAPPKDTPASTEPAN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRVAVLSVALSLALFASPGWAQKAGPAAAQASADDPEANEAAVSKVPLDEIRRFVAVYNA
CCHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHH
VKQAYVDPVEDKKLMHSAVRGLLSDLDPHSTYFDKEDAEAFDEQATGAYDGIGVELLQQQ
HHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHCC
DNTLKVIAPIDDTPAARAGIRAGDVIVAIDGKPIDASKAMEPLRGESGSKVVLTIMRDKT
CCEEEEEECCCCCCHHHCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCEEEEEEEECCC
PKPFDVTLQRETIRVASVRSKLLEPGYGYIRISTFQADTGADFQKNLKQLQAGGKLRGLV
CCCEEEEEEHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCEEEEE
LDLRSNPGGLLTSAVQVADDLLDKGNIVSTRGRISISDAKFDATPGDLLSGAPVVVLVDA
EEECCCCCHHHHHHHHHHHHHHCCCCEEECCCEEEECCCCCCCCCHHHHCCCCEEEEEEC
GSASASEVLAGALRDNKRARIIGSRTFGKGSVQTVLPLDNGDSVKLTTARYYTPSGKSIQ
CCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEECCCCCEEEEEEEEEECCCCCEEE
ASGIMPDVLLTPEPQPGDADVPASLTDYSEATLPGHLRGDDEGEEGYSAGDVLPGDGPIA
ECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
EALAELKQPGSVAKAQAARKAKAQAAQKAKPAKTGADPKPAAARPATTDKPTSAEPAGKA
HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
KPATAPAAPAEPVQPAPPKDTPASTEPAN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]