| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78045584
Identifier: 78045584
GI number: 78045584
Start: 30846
End: 31289
Strand: Reverse
Name: 78045584
Synonym: XCV0028
Alternate gene names: NA
Gene position: 31289-30846 (Counterclockwise)
Preceding gene: 78045585
Following gene: 78045581
Centisome position: 0.6
GC content: 63.29
Gene sequence:
>444_bases ATGACACAGCGATTGATGAAGACCGCACTGATCGGCGCCCTTGCCTTGCTGTCGCAGGGTGCGTTGGCACAGGCGGCCGA CAAGCCGGCCAAGGCGCTCACCTCCGGTGAGGTCACCAGCATGCTCACCGCAAAGGGCTACACCAAGGTGCACGACGTCA AGTTCGAGCATGGCGTCTGGACGGCAGACGCGCGTAGCGGCGACGGCAAGGACGTGGACGTGCACATCGATCCGGTGACC GGCCGCGTCTATGGCGACCAGACCACCTCCAAGCTCAGCGAAGCCGACGTGCGCGCATCGCTCTCCACCGGCGGCTATGC CGATGTGCACGACCTCAAGTTCAAGGATGGCCTGTGGAAGGCCGATGCCAAGCGCAACGGGCAGAAAGTCGAACTGCACG TGGATCCGGAAGACGGTCACGTGGTGAGCGTGGAGAACGATTGA
Upstream 100 bases:
>100_bases TCAGCTAACTGAACTTTCGTTGCGGCCGCTTGCCCGTTTTTCACCTGATGGCGATAGGCCGCCCTCCAGCATGAGCGCAC TTCACTGCAGGAGCATTCCC
Downstream 100 bases:
>100_bases GTGGCGCACGTCTCGTTCGTCTGCCAGGCGGGTAGGGTAGATCGAGCGTCGCAGAGAATGCGCGATTGCCGCATGGCCAT GCGTCCCATCCATGGGCTGA
Product: putative secreted protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MTQRLMKTALIGALALLSQGALAQAADKPAKALTSGEVTSMLTAKGYTKVHDVKFEHGVWTADARSGDGKDVDVHIDPVT GRVYGDQTTSKLSEADVRASLSTGGYADVHDLKFKDGLWKADAKRNGQKVELHVDPEDGHVVSVEND
Sequences:
>Translated_147_residues MTQRLMKTALIGALALLSQGALAQAADKPAKALTSGEVTSMLTAKGYTKVHDVKFEHGVWTADARSGDGKDVDVHIDPVT GRVYGDQTTSKLSEADVRASLSTGGYADVHDLKFKDGLWKADAKRNGQKVELHVDPEDGHVVSVEND >Mature_146_residues TQRLMKTALIGALALLSQGALAQAADKPAKALTSGEVTSMLTAKGYTKVHDVKFEHGVWTADARSGDGKDVDVHIDPVTG RVYGDQTTSKLSEADVRASLSTGGYADVHDLKFKDGLWKADAKRNGQKVELHVDPEDGHVVSVEND
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15702; Mature: 15570
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQRLMKTALIGALALLSQGALAQAADKPAKALTSGEVTSMLTAKGYTKVHDVKFEHGVW CCHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHCCCCHHHHEECCCCCEEEEEEECCCEE TADARSGDGKDVDVHIDPVTGRVYGDQTTSKLSEADVRASLSTGGYADVHDLKFKDGLWK ECCCCCCCCCEEEEEECCCCCEEECCCHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCEE ADAKRNGQKVELHVDPEDGHVVSVEND CCCCCCCCEEEEEECCCCCEEEEEECC >Mature Secondary Structure TQRLMKTALIGALALLSQGALAQAADKPAKALTSGEVTSMLTAKGYTKVHDVKFEHGVW CHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHCCCCHHHHEECCCCCEEEEEEECCCEE TADARSGDGKDVDVHIDPVTGRVYGDQTTSKLSEADVRASLSTGGYADVHDLKFKDGLWK ECCCCCCCCCEEEEEECCCCCEEECCCHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCEE ADAKRNGQKVELHVDPEDGHVVSVEND CCCCCCCCEEEEEECCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA