| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is otsB [H]
Identifier: 78044698
GI number: 78044698
Start: 585780
End: 586526
Strand: Direct
Name: otsB [H]
Synonym: CHY_0671
Alternate gene names: 78044698
Gene position: 585780-586526 (Clockwise)
Preceding gene: 78044465
Following gene: 78043188
Centisome position: 24.39
GC content: 43.37
Gene sequence:
>747_bases TTGACTAAGCTTTCTGGCCGAAAAATACTGCTCATGACCGATTTTGACGGAACGATAGCGGCTTACAGAAAAGACCCGCG CAAGGTAAGTTTAGCCAAAGATATGGTGGCAATCCTGCAGAAATTTACCCGGCAGCCAAATCTTAAATTAGCGGTGGTTT CCGGACGGGGGCTTCAGGATTTAGAAAAAATGGTAAATATCCGGGGAATTATTTTAGCCGGCTGTTTTGGAGGAGTATTT CGGGATGAACAGGGAAAAGTTCATACCTGGGAAAAGGCCCCCGACTATTTTGGACCGGTGGAGGAGTTAGCGGAATTTTT TTCCCGTTCTCCCGTTTTTAAAGGAGTTTATATTGAAAAAAAAGAAATTGCCTTAACTTTACATTACAAAGATTTGGGAG TAAAGAAACGGCGGGAGGTTTTAAAGGTAATTGAAGAAGCCCGGGAAAAAAACCCTATCTTTAACTTCCACGTGGGAGAT AAAGGAACCGAAATTATCCCGCAGGGATTGGGCAAAGGATGGTTTATTCAGGAAATGTTAAAAAAATACCCGGACTTTTA TCCGGTGTTTTTAGGGAATGACTGGGTAGACCTTGAGGGAATTGAAGTTTTAAGGGGGCAGGGTTTAGCATTTTACGTAG GGGATACCCCGCCCCCGGGAAGTCACGGGCTTTCGGGGTTAAAAGAGGTGAAAAAGCTTTTTAAGAAGCTTTTGGCAGTA AACCAAGCCGCTTTAAATGCATCTTAA
Upstream 100 bases:
>100_bases GAATGGTGGCTGGAAAATTTCCTGGGAAAAGAACTACGGTTGATGGATACAGGTTTTGGCAAATACTACCGCAAACGGGG TGAAAAGAAAGTTGGAGCTA
Downstream 100 bases:
>100_bases TGCCGATGATTTCCCACATCCGTACCCAGGGGTCAATTTTTTGAAACTTTAAAGGATAAAAAATTGAATTATCGGCTATT TCTTCGATGGTATATCCCTT
Product: trehalose-phosphatase
Products: NA
Alternate protein names: TPP; Osmoregulatory trehalose synthesis protein B; Trehalose 6-phosphate phosphatase; Trehalose-phosphatase [H]
Number of amino acids: Translated: 248; Mature: 247
Protein sequence:
>248_residues MTKLSGRKILLMTDFDGTIAAYRKDPRKVSLAKDMVAILQKFTRQPNLKLAVVSGRGLQDLEKMVNIRGIILAGCFGGVF RDEQGKVHTWEKAPDYFGPVEELAEFFSRSPVFKGVYIEKKEIALTLHYKDLGVKKRREVLKVIEEAREKNPIFNFHVGD KGTEIIPQGLGKGWFIQEMLKKYPDFYPVFLGNDWVDLEGIEVLRGQGLAFYVGDTPPPGSHGLSGLKEVKKLFKKLLAV NQAALNAS
Sequences:
>Translated_248_residues MTKLSGRKILLMTDFDGTIAAYRKDPRKVSLAKDMVAILQKFTRQPNLKLAVVSGRGLQDLEKMVNIRGIILAGCFGGVF RDEQGKVHTWEKAPDYFGPVEELAEFFSRSPVFKGVYIEKKEIALTLHYKDLGVKKRREVLKVIEEAREKNPIFNFHVGD KGTEIIPQGLGKGWFIQEMLKKYPDFYPVFLGNDWVDLEGIEVLRGQGLAFYVGDTPPPGSHGLSGLKEVKKLFKKLLAV NQAALNAS >Mature_247_residues TKLSGRKILLMTDFDGTIAAYRKDPRKVSLAKDMVAILQKFTRQPNLKLAVVSGRGLQDLEKMVNIRGIILAGCFGGVFR DEQGKVHTWEKAPDYFGPVEELAEFFSRSPVFKGVYIEKKEIALTLHYKDLGVKKRREVLKVIEEAREKNPIFNFHVGDK GTEIIPQGLGKGWFIQEMLKKYPDFYPVFLGNDWVDLEGIEVLRGQGLAFYVGDTPPPGSHGLSGLKEVKKLFKKLLAVN QAALNAS
Specific function: Removes the phosphate from trehalose 6-phosphate to produce free trehalose [H]
COG id: COG1877
COG function: function code G; Trehalose-6-phosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the trehalose phosphatase family [H]
Homologues:
Organism=Escherichia coli, GI1788207, Length=220, Percent_Identity=26.8181818181818, Blast_Score=73, Evalue=2e-14, Organism=Drosophila melanogaster, GI221473368, Length=229, Percent_Identity=30.5676855895196, Blast_Score=103, Evalue=9e-23, Organism=Drosophila melanogaster, GI20129307, Length=229, Percent_Identity=30.5676855895196, Blast_Score=103, Evalue=9e-23, Organism=Drosophila melanogaster, GI24582490, Length=229, Percent_Identity=30.5676855895196, Blast_Score=103, Evalue=9e-23, Organism=Drosophila melanogaster, GI19920676, Length=247, Percent_Identity=25.5060728744939, Blast_Score=74, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR006379 - InterPro: IPR003337 [H]
Pfam domain/function: PF02358 Trehalose_PPase [H]
EC number: =3.1.3.12 [H]
Molecular weight: Translated: 27870; Mature: 27739
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKLSGRKILLMTDFDGTIAAYRKDPRKVSLAKDMVAILQKFTRQPNLKLAVVSGRGLQD CCCCCCCEEEEEECCCCCEEHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHH LEKMVNIRGIILAGCFGGVFRDEQGKVHTWEKAPDYFGPVEELAEFFSRSPVFKGVYIEK HHHHHHHHHHEEEHHHCCCEECCCCCEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEEEE KEIALTLHYKDLGVKKRREVLKVIEEAREKNPIFNFHVGDKGTEIIPQGLGKGWFIQEML EEEEEEEEEHHCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHCCCCHHHHHHH KKYPDFYPVFLGNDWVDLEGIEVLRGQGLAFYVGDTPPPGSHGLSGLKEVKKLFKKLLAV HHCCCEEEEEECCCEECCCCHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHH NQAALNAS HHHHCCCC >Mature Secondary Structure TKLSGRKILLMTDFDGTIAAYRKDPRKVSLAKDMVAILQKFTRQPNLKLAVVSGRGLQD CCCCCCEEEEEECCCCCEEHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHH LEKMVNIRGIILAGCFGGVFRDEQGKVHTWEKAPDYFGPVEELAEFFSRSPVFKGVYIEK HHHHHHHHHHEEEHHHCCCEECCCCCEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEEEE KEIALTLHYKDLGVKKRREVLKVIEEAREKNPIFNFHVGDKGTEIIPQGLGKGWFIQEML EEEEEEEEEHHCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHCCCCHHHHHHH KKYPDFYPVFLGNDWVDLEGIEVLRGQGLAFYVGDTPPPGSHGLSGLKEVKKLFKKLLAV HHCCCEEEEEECCCEECCCCHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHH NQAALNAS HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8045430; 9097040; 9278503 [H]